G379519


Basic Information

Item Value
gene id G379519
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000189
NCBI id null
chromosome length 4726117
location 308978 ~ 309182 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU433868
CCAAAACCGAATGTCTTTGAAATCTTGTAACCAAATAAAACAGATGTCATTGAAATCTCGTAACTGAATAAAACCGACCATTTTTGAAATCTCGTAAAAGAACAAAGGAACAAACCCAACCATCTTTGAAATCTCACAACAGAACAAAACCGACTGACACTGAAAACCAACTGTCATTGAGATCTCGTAACCAGACAAAACCGAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU433868 True 205 lncRNA 0.37 1 308978 309182

Neighbor

gene id symbol gene type direction distance location
CI01000189_00297654_00300990 FOSL2 coding upstream 7520 297654 ~ 301458 (+)
CI01000189_00183881_00277704 BRE, BRE.L coding upstream 31274 183881 ~ 277704 (+)
CI01000189_00086672_00092620 SLC4A1AP coding upstream 216358 86511 ~ 92620 (+)
CI01000189_00322834_00332685 MOCS1 coding downstream 13652 322834 ~ 332750 (+)
CI01000189_00438982_00445216 ASMT2 coding downstream 129800 438982 ~ 445645 (+)
CI01000189_00448469_00457564 JADE1 coding downstream 139287 448469 ~ 458185 (+)
CI01000189_00537167_00546397 NA coding downstream 227985 537167 ~ 547307 (+)
CI01000189_00552262_00553370 NA coding downstream 241651 550833 ~ 553486 (+)
G379481 NA non-coding upstream 25603 282954 ~ 283375 (+)
G379516 NA non-coding upstream 40084 267017 ~ 268894 (+)
G379515 NA non-coding upstream 123701 184928 ~ 185277 (+)
G379470 NA non-coding upstream 157563 146137 ~ 151415 (+)
G379482 NA non-coding upstream 165652 136040 ~ 143326 (+)
G379556 NA non-coding downstream 98341 407523 ~ 407762 (+)
G379557 NA non-coding downstream 98891 408073 ~ 408311 (+)
G379558 NA non-coding downstream 99375 408557 ~ 408761 (+)
G379560 NA non-coding downstream 105058 414240 ~ 414491 (+)
G379561 NA non-coding downstream 106568 415750 ~ 416048 (+)
G379600 NA other downstream 166433 475615 ~ 496908 (+)
G379799 NA other downstream 703364 1012546 ~ 1012903 (+)
CI01000189_00987665_01058757 PACRG other downstream 706849 987525 ~ 1059385 (+)
G381120 NA other downstream 2530039 2839221 ~ 2841125 (+)
G381491 NA other downstream 3316554 3625736 ~ 3626855 (+)

Expression


Co-expression Network