G379557


Basic Information

Item Value
gene id G379557
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000189
NCBI id null
chromosome length 4726117
location 408073 ~ 408311 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU433907
ATTTTAATGGCTGTGTTTCCCAAATGAAACACAAGAGCTGCTAGTTTTGAGTGATGTGTATTTTGCGTTTTGCAAAAAGTTTGCTTTACAATTGCAATCTGATTGTAAAGCAGATAGCTTGCAGTTTTGCAGTCTGAAGATTAGGTATACGAGTGAATGGGTTCACTGAGTGGGTCTCAAGTACCACTTTTAGTGTGTAAGCAATTTAAAAAAAAACTGCAAGGTTCCAGGGGTATTAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU433907 True 239 lncRNA 0.37 1 408073 408311

Neighbor

gene id symbol gene type direction distance location
CI01000189_00322834_00332685 MOCS1 coding upstream 75323 322834 ~ 332750 (+)
CI01000189_00297654_00300990 FOSL2 coding upstream 106615 297654 ~ 301458 (+)
CI01000189_00183881_00277704 BRE, BRE.L coding upstream 130369 183881 ~ 277704 (+)
CI01000189_00086672_00092620 SLC4A1AP coding upstream 315453 86511 ~ 92620 (+)
CI01000189_00438982_00445216 ASMT2 coding downstream 30671 438982 ~ 445645 (+)
CI01000189_00448469_00457564 JADE1 coding downstream 40158 448469 ~ 458185 (+)
CI01000189_00537167_00546397 NA coding downstream 128856 537167 ~ 547307 (+)
CI01000189_00552262_00553370 NA coding downstream 142522 550833 ~ 553486 (+)
CI01000189_00613239_00646678 NA coding downstream 203288 611599 ~ 646948 (+)
G379556 NA non-coding upstream 311 407523 ~ 407762 (+)
G379519 NA non-coding upstream 98891 308978 ~ 309182 (+)
G379481 NA non-coding upstream 124698 282954 ~ 283375 (+)
G379516 NA non-coding upstream 139179 267017 ~ 268894 (+)
G379515 NA non-coding upstream 222796 184928 ~ 185277 (+)
G379558 NA non-coding downstream 246 408557 ~ 408761 (+)
G379560 NA non-coding downstream 5929 414240 ~ 414491 (+)
G379561 NA non-coding downstream 7439 415750 ~ 416048 (+)
G379592 NA non-coding downstream 50996 459307 ~ 460431 (+)
G379599 NA non-coding downstream 65499 473810 ~ 474024 (+)
G379600 NA other downstream 67304 475615 ~ 496908 (+)
G379799 NA other downstream 604235 1012546 ~ 1012903 (+)
CI01000189_00987665_01058757 PACRG other downstream 607720 987525 ~ 1059385 (+)
G381120 NA other downstream 2430910 2839221 ~ 2841125 (+)
G381491 NA other downstream 3217425 3625736 ~ 3626855 (+)

Expression


Co-expression Network