CI01000203_00132981_00136502


Basic Information

Item Value
gene id CI01000203_00132981_00136502
gene name NA
gene type misc
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000203
NCBI id null
chromosome length 933177
location 130881 ~ 138512 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000203_00132981_00136502.mRNA
ATTTGTATCTTTTGTATATATCTGTTTGGTTGGAGATGTGCGGTTGTTTGATACGACACGTCTGCCTTCCGGAGGAGCGACGGACATATTTATCCACGCATGTGCGAACCGATCCCTGACTCTGATGTACATAGTTTGTAGGGAATAACAGCGGGAGATCTCCATACCGGATGCAAACGGGAAAGGTGATGGCGGTGCGGTCGCGTTGCATGGGATTGTGGGGCTGATGATGATGATGATGATGAAGTGTGTGTGTGTGCGAGTGTGTAATCGTGCATGTCTGCTCCAATAACCTTCCGTACCGTCGTCAGGCCATGATCTTTCTCTCCCTTTGCTCTTCCTTTAATTCATACTCATAACTGGATTTGAACTTCAAACGGACCTGATGCTGCAGAGCGCCTCCGATTGCACCCGTTTCTGTTTCTGTTGGTTTGGTGGAACAGAAGCGGCAGACGTGAGTTTGACCACGAGAAGCATCAGCGTTCACTCGCACACGAGACCAAAGAGCCGAACCCTCACGCCACCTTCACGACGCCTCACGATGATCACTTACAGCACGCGACCGTGTCCCAGATTCTTTTAACGCTAATGAAAACGGAGAAACAAACCTAAACATCAGTGACGACTGCTGATAAATGATCAATGACATGATCAAAGAAAAGTGCCAATGCCAGAGAGATATTCAGTATCTAGATGTACCTGTCGCTCCTGCAGTGTTTTGACTAGGAAATGACATCAGTGAGAACAGCAGTCCGTCGTTTAATGTGTGGCCGGCATTAGACGCAAAACATGTCTTTCCAAAAAACCTCGGAAAACAAAGATACTGAACAGGAGTTTGAATGTTGAGAGCGGCAGAGCGATGCAGTGATGAATCTCTGTTTTGACTCGGACTCGCACAAATTGAATTACAAATGCAAAATCAGCATTTTTATTTTCTAAATGATCATGTGACAGCATTGAATATGGTGGAGTGATGGACATACAGGTGTGGTCAGCAGCCGTTGAATCAAACGCTCCGTGTCGCTCTCCACGATTACAGTCTGAACGTTCATCTGTGGACCAGAAACTCAATCACACACAAGCCCGTTTCTGACAAACAATTCATGCTTTTGTAAATTATAATAATGACATAAAAAGTAGAAATTATGACACACACACAAAAAAATGTAATTATGACATGGTCGAAAAAGTAATAATTGACAAAAAGTAGGAATTATGACATACACCAAGTCATAGACATAAAAAGTCGACAAAATATTGACAGTCATAATTAATTATTTCCCCACCAGCAGTTTTTTAAAAAGTTGCCAGCATTTTTGATAATTTTCACAAAACTTTCACGTCCCCAGAATATTTTGTTGTATGAATATCTGAACAATATATCAAAAGAAAGAACAGAGCCTCTGCTTTTACACATTTGATTCTAGCTTCATTCATTTCTTTTTTTTATCAACACTTGAATATGGGTTAGTTTAAAAAAAAAAAAGCAACATTTTGAACAAAAAGCTGAGAAAATCCCATTTTGTCAAAGTCTTTATCCGGACGGGATTCACAGCGATGATCAAAACACAGATGGAGTAGATACAGTCCATCAACACCTCAGAGCTTCACAGTCCTATAGCTCGACATTTCATTCAGTAACGTTTTGATTTATATAGTGTTTGATGATCTTATTTTACATGTGCATCAGCAATGCTTCCTTCGCTTGTTTCTGCTGCTTCTTCGCCTGTGTTTTGATCCGGAGGTTCTGTACTCTTTCAAAAGGTGCGTAATAGCGCCCCCTACTGTATAACAGGGAAAACAAATATTGCCTGATAATTCTGTTAATGGCGGGGAAAGAGTTAAGACTATATCTTAACTTTGACTTTTTAATCTCATGACGTATGATAATTATTTCGACTTTTTATCATAAATATAACTTAGTATGTCGTATTTTTGAATTTTTATTCTCATAATTCTGATATACAGAAGCTGATGTGTCAGAAATGGGTTCGATGACCAGCGTCAGTCATGAGTGAGTTTCAGAGCTTTCAGACGACTAGCTCTCAGAGAACGTGTCCTCCAATAATCTGCAGTAAAGACCGGATCATTTCAGCGCTCTGTTTATTTTTATTGACTGATGTCGGATTGACGGGTGCACGCAGAACACGCCCACCTCCCCGCGCGCGTTGGAGCGCGCCTTCATCAGTGTGCGGGAGCGCGCAGTCAGTGTGGAATGATGCTGCCGGCGAGTGTGCACGCGGTTCAGATGGTCGGATGGTTTCTGGAGGCTCGAGGCGGGTTCAGGCGTCTGAAGATGTTTTCCATCATCCTGTGAGGCTGTTTCTGCCCAGATCCAGGATGCAGGAATATCTGTCTCATCTGGGCAGGACGGTTTTGGCCAGTTTCCCCGTTCAGGCCACGCTGCACTTTTACAACGATGACGATTCCAGCTCTGAGGAAGACGACGATGGAAACGGTGCTGATCCACGGAGATTCTCACCTGAGACGAGCAGGTATACGGCGCGACAGGTCGGGTCACGCGGCAGCGAGACGGGTCACGCCATCAAAGAGAAAACAGACCTTTGATCTGAGGAACATCCGTTCACATCATCCCACATCTGGGAACGTCTTTAAGGTGTCTTTAAATATTATCCCTAATAGTGTTTCATTAGTATGTTATCATTATTTCCATTATATCATTATTGTAACTAATCATTATTTTAATGTTTATTACTGTGAAGCTGCTTTGAAACAATCTGTATTGTACAACTTCAGAGAAATAAATCTGACTTGTTATTGCTGGAAATCTAAACACAAATAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000203_00132981_00136502.mRNA False 2804 mRNA 0.42 5 132745 138512

Neighbor

gene id symbol gene type direction distance location
CI01000203_00118686_00131344 NA coding downstream 1401 118686 ~ 131344 (-)
CI01000203_00103997_00118416 TTC3 coding downstream 14329 103867 ~ 118416 (-)
CI01000203_00086596_00095920 DYRK1A, DYRK1AA coding downstream 36573 84952 ~ 96172 (-)
CI01000203_00069971_00082234 NA coding downstream 49267 69479 ~ 83478 (-)
CI01000203_00138806_00154529 KCNJ9, KCNJ6 coding upstream 49 138561 ~ 154554 (-)
CI01000203_00184424_00196181 ERG coding upstream 45770 184282 ~ 199866 (-)
CI01000203_00205967_00209724 NA coding upstream 67384 205896 ~ 212692 (-)
CI01000203_00229325_00233430 NA coding upstream 90784 229296 ~ 234414 (-)
CI01000203_00237223_00242867 NA coding upstream 98396 236908 ~ 243584 (-)
G388456 NA non-coding downstream 113030 17196 ~ 19715 (-)
G388469 NA non-coding upstream 16879 155391 ~ 180464 (-)
G388467 NA non-coding upstream 30678 169190 ~ 262632 (-)
G388470 NA non-coding upstream 88214 226726 ~ 227497 (-)
CI01000203_00294049_00335783 AKT2, AKT2L non-coding upstream 165125 293775 ~ 335783 (-)
G388500 NA non-coding upstream 200298 338810 ~ 339163 (-)
G388477 NA other upstream 32651 171163 ~ 172264 (-)
G388454 NA other upstream 78277 216789 ~ 218925 (-)
CI01000203_00287087_00290157 NHLRC3 other upstream 147200 285712 ~ 290157 (-)

Expression


Co-expression Network