G388795


Basic Information

Item Value
gene id G388795
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000204
NCBI id null
chromosome length 519198
location 213881 ~ 214246 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU445070
AATGACAATATTTTCAAACAATGCTAACAGGCTGATATCTAGCTAGCAAGCAAAAGGACAATCAAACATTTTATATTTAGTACAAGGTTTTAAAATTTATAGCGGTTGTACCGAATGACCTGATGTTTCGGGACATGCGTATGAGCGAGTGAAAACATGAATTTTTCAAATAGTTAAAAGAGAGTTAGTTACTTTGCTTCATGACCATGTGGTCCTTTGCAGGTGTCTGAATGATGTCACATCCTGTCACATGATATTGACCGCATGACTTGATCCAAAATGGTCCCTTTATATTGGTTACTCCGAATGACATCAATGAAATTCATTTTTCCAGACATTCTTTCTC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU445070 True 346 lncRNA 0.36 2 213881 214246

Neighbor

gene id symbol gene type direction distance location
CI01000204_00185946_00198530 NA coding upstream 15048 183842 ~ 198833 (+)
CI01000204_00183202_00183616 NA coding upstream 30244 180937 ~ 183637 (+)
CI01000204_00142534_00146693 NA coding upstream 67013 142332 ~ 146868 (+)
CI01000204_00131925_00133878 DUSP26 coding upstream 79087 131925 ~ 134794 (+)
CI01000204_00116059_00127754 NA coding upstream 85969 116059 ~ 127912 (+)
CI01000204_00223112_00227527 PARGB coding downstream 8866 223112 ~ 227564 (+)
CI01000204_00231342_00236857 NA coding downstream 16750 230996 ~ 236857 (+)
CI01000204_00338062_00338298 NA coding downstream 123816 338062 ~ 338801 (+)
CI01000204_00347970_00349394 MRPS24 coding downstream 133724 347970 ~ 349606 (+)
CI01000204_00361326_00370615 POLM coding downstream 147080 361326 ~ 371385 (+)
G388688 NA non-coding upstream 62832 149852 ~ 151049 (+)
G388757 NA non-coding upstream 64285 149058 ~ 149596 (+)
G388729 NA non-coding upstream 143626 27272 ~ 70255 (+)
G388726 NA non-coding upstream 194103 19459 ~ 19778 (+)
G388800 NA non-coding downstream 23006 237252 ~ 238099 (+)
G388692 NA non-coding downstream 51637 265883 ~ 270196 (+)
G388701 NA non-coding downstream 56791 271037 ~ 271434 (+)
G388704 NA non-coding downstream 58545 272791 ~ 273007 (+)
G388713 NA non-coding downstream 59847 274093 ~ 275346 (+)
CI01000204_00033958_00057140 NA other upstream 179389 33908 ~ 57362 (+)
G388799 NA other downstream 5909 220155 ~ 222772 (+)
G388806 NA other downstream 136463 345436 ~ 388631 (+)

Expression


Co-expression Network