CI01000204_00231342_00236857


Basic Information

Item Value
gene id CI01000204_00231342_00236857
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000204
NCBI id null
chromosome length 519198
location 230996 ~ 236857 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000204_00231342_00236857.mRNA
TTATAAAAACACGTTTTTAACAAAGCGAAGTTGACAGATTTACAATATTATCATGTTTTAGCGACGTGCCGCCCGATAATCTCAATGTAAAACTTTCGCACTGTTGTTAGTTACCCCCTCAGGTGAATGTTCGCGGTACTGACTATAAGGTGCGGTCACATTAGCGTTATTTCAGCGAAAAGGTCCTTTGTCTGTTGTCAATGATTCGTTTAAAAACTTTGTTTAAAAGCCATTCGTTAAAAAAAATTGTTAAAACCATACGTAGTTTAAATCAGTTTTTTATTATTATTATTCTGATGTTTTTGTTTTATTTTGGCATTAGATGTCGCACCACAACAGCGATCAAATGAGGGGATGCCTCACTCATACAAATGGAAACACTGATGATCATTCATCAAGAGGAGAATCCAGAAACCAGCGCTCACCGACTGATCCTGCAGGCAAAGGGGCCACAAGCCAGACCACATCTAGTGACACTGGGGGCACAATGAATAAAAAACCACCACCATATAGTGAGACTAGAGGTGAAGGGAGAGTAGAAGAAATGGCTGCATCTTTTGAGAATGCACAGAAAGGGGGCAAAAAATCCACATATGATGAGCATAGAGACAAAAAGTTCCAAAACCCATCCTCATATAGTGCATCTGAAAACTGCAGGGCCTCAAACCAGCCCTCTAAAAGTGAACCTATGGACACTTCAGATGCTTTCAGCTCAGGAACAAGACCAAAGCCTGTGATTCATCTGGGACCAACATATCCCATCAAGAACCTCAAGAAAATGGAAAACTTCAGCACAGATTCCCATGAAAGGCCAACTCCAATGAATGGACATACAATACTGATAGATATTCCATATTTCCGAAGAGGTGTAATTGTCCCTCACGAAGGGAAACACGTTTGGGATTCCAACCATGTGAAGTTACCACATCTGTATCCACAACCTGCATCCCACCAGAAGTCCCGTCCATCACCCTCTCGCTGGGACGCCACTTGTGAAGCGTTGAACAGACTCACCAAAGGAAGTTTATCTATTGGGGATATTAAGTCCGCAATAATGTCTTACAATTCCAGCAACAAGGACAAATGGACATTTGAAGCATTTCATTATTACGGTCAGAACGTACACGCAATGGACAATAATCTCCACATGGTGATCCCAAAGATGGCCAAACTGGCACTTGATTTACCTGATCTCATCAAACGGCCCATTCCTCTACTGCGACAGCAGCAGAACCAGGCCATAACACTGTCTCAGCAGCAGATTTCCTGTCTGTTAGCAAACGCCTTCTTCTGCACCTTCCCTCACAGGAATGACACTAGTCCTGGTTCAGAATACGCCAACTACCCAACCATTAACTTCAGCAGCCTGTTTGGTAGCCGGAATGACCCAGCGAAATCAGCCCTACAGGCAGAGAAACTGAGAGCCATATTCCATTACTTTGACACAGTGACAAATGAAAGTTCTCATCAAGATTCAGCATCAAAACCTGATGGACTGGTTACTTTTGAAAGGGTTTGCATTCCGCCACAACAGCTCCCTAACTGGAAGAATCGGAAGGAAACCCTGAAGAACCTCCACATCTCTTCAGAAGGATCCATTGAGCAAGAGGGAACAGGCATGCTACAGGTGGACTTTGCCAGCAAATATATTGGTGGTGGAGTGCTAAAGTCAGGACTGGTTCAGGAGGAGATCCTCTTCCTCATGAGTCCAGAGCTCATCGTGGCCAGACTCTTCACAGAGAAACTGGCTGATAACGAGTGTCTAAAGATCACAGGTCCTCAGATGTACAACATTACTACTGGCTACAGCAAAACCTTCTCTTGGGTGGGTCCATACATTGATCTCACAAAGCGGGACACGTGGAAGAGACGTTATCGGCAGATTGTTGCCATCGATGCTCTGGACTTCAAGAACCCGAAGGAGCAGTACACCAAAGAGACTATAACACGAGAACTCAACAAGGCATATGTGGGACTCTGTGGACAACCGAAAACAGCCATCGCAACGGGAAACTGGGGCTGTGGAGCTTTCAAAGGGGATCCTAAACTAAAAGCTCTCATCCAGCTGATGGCTGCTGCGGTGGCTGATCGAGACATGGCTTACTTCACGTTTGGCAATGAACATCTTGCATACGAAATACAAAGAATGCATGATATACTGGCCAAAGAGAAAGTGACTGTGG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000204_00231342_00236857.mRNA True 2183 mRNA 0.45 14 230996 236857

Neighbor

gene id symbol gene type direction distance location
CI01000204_00223112_00227527 PARGB coding upstream 3432 223112 ~ 227564 (+)
CI01000204_00185946_00198530 NA coding upstream 32163 183842 ~ 198833 (+)
CI01000204_00183202_00183616 NA coding upstream 47359 180937 ~ 183637 (+)
CI01000204_00142534_00146693 NA coding upstream 84128 142332 ~ 146868 (+)
CI01000204_00131925_00133878 DUSP26 coding upstream 96202 131925 ~ 134794 (+)
CI01000204_00338062_00338298 NA coding downstream 101205 338062 ~ 338801 (+)
CI01000204_00347970_00349394 MRPS24 coding downstream 111113 347970 ~ 349606 (+)
CI01000204_00361326_00370615 POLM coding downstream 124469 361326 ~ 371385 (+)
CI01000204_00380801_00383770 NA coding downstream 143756 380613 ~ 383984 (+)
CI01000204_00392220_00393113 PURBB, PURB, PURBA, PURB.L coding downstream 154819 391676 ~ 393358 (+)
G388795 NA non-coding upstream 16750 213881 ~ 214246 (+)
G388688 NA non-coding upstream 79947 149852 ~ 151049 (+)
G388757 NA non-coding upstream 81400 149058 ~ 149596 (+)
G388729 NA non-coding upstream 160741 27272 ~ 70255 (+)
G388726 NA non-coding upstream 211218 19459 ~ 19778 (+)
G388800 NA non-coding downstream 395 237252 ~ 238099 (+)
G388692 NA non-coding downstream 29026 265883 ~ 270196 (+)
G388701 NA non-coding downstream 34180 271037 ~ 271434 (+)
G388704 NA non-coding downstream 35934 272791 ~ 273007 (+)
G388713 NA non-coding downstream 37236 274093 ~ 275346 (+)
G388799 NA other upstream 8224 220155 ~ 222772 (+)
CI01000204_00033958_00057140 NA other upstream 196504 33908 ~ 57362 (+)
G388806 NA other downstream 113852 345436 ~ 388631 (+)

Expression


Co-expression Network