CI01000204_00380801_00383770


Basic Information

Item Value
gene id CI01000204_00380801_00383770
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000204
NCBI id null
chromosome length 519198
location 380613 ~ 383984 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000204_00380801_00383770.mRNA
CTATAAATACTTGAGCCCCATGCTGGAGGTGTTGATCAGTGAACCCAAAGCCACGCTTATCAGAACACAAACACAGACCTGACTCGCTCAGTCACGGGACTCCACTTCTGGAAACAAGAACAACTGCATTACCTTGTTTTATACCGGATATTTGTCTTTCTTTGCTGGATTTGGACACGTTCTCTGAGATGAAGGGGCATTTTTCCATCGAGTGGCTTTCTCAAAGCAGCCAGGCCTTGTGTAGCTCGGCTTCCACACATCCCTCCAACTCTTGGGACTCTCCCGGCCGGGACAGCCCGAGCACCTCCGGCACAGCCTCCGAGAGCCTTCCAGGCTTCTACAGCAGATGGAGACCGGAAAACACGGAGGTTCAGGAGAAACGTATGGAGCCAGCGCAGCCGGGAAACAGTTTGCTGTGTACATCTACACAAGAGACTGAGTCAAATGACAACAATATCATCCAGCAACGCACTCACGCATCAGAACCAGGTTTCAGCAGCAGCACAGAGGAGGAGGAGACGTCAGGGTACGAGAGCGAGGGTGGGCGTTCTCTCTCACCTGGGGCCCTCAAAGAACCGGCTCCATCTGCATCGCCCTCTACTGGCCGCAGACCCCGAACGGCTTTCACCGCTGAGCAGATCAACAGTCTGGAGAAAGCCTTCAAGAGAAACGCTTATCTGGGAGCCCAGGACAAAGCTGAGCTCTGCAAAAGACTAAATCTGTCTGATAAACAGATCAGAAACTGGTTCCAGAACCGACGCATGAAGCTGAAACGGACCGTTCAGGACAGCCTCGCTCACGCCTGCCAGGCCAAGGTGGCCTCGCATTTGATGCATTACTCCGACCTGCACAGTTTCCGTACCGCTCCGTATCCCAGCTTCTACCCGGGGGTCCAGGAGAGCCCGGCACCTTACGGCTCCGGATTCCACTACGGTCCTGCCACGGCCGGAAGCCTGCCGAGCCTGCCTGTGGAGGCCCTGTATCAGTACAGCACCCTACAGAGTCTTCCCGTCCATCCCAGCAACGCTTCCATGATGACGCCGTACCCGCCGTACCACTCTCACTTCTACAGCACACAGTGAGAGGAGAGACCGCCAACAAAACTTCATTTCTGCCTGTTAGTCAAGGCGTTGCGTCTTAGGCTTTGTTTACATCTTTACTTTTGTGAATACAGGGTGAAGTGCAATAACAAATGTGATCTTTTTTTATTGTTTTGATGAATTATTTAAATATGTTTTGTAAATCTTGAAAAAGTTCTATTTCGTTCATGTCTATGTGTACAAAAGGAGTGTATAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000204_00380801_00383770.mRNA True 1296 mRNA 0.52 3 380613 383984

Neighbor

gene id symbol gene type direction distance location
CI01000204_00361326_00370615 POLM coding upstream 9228 361326 ~ 371385 (+)
CI01000204_00347970_00349394 MRPS24 coding upstream 31007 347970 ~ 349606 (+)
CI01000204_00338062_00338298 NA coding upstream 41812 338062 ~ 338801 (+)
CI01000204_00231342_00236857 NA coding upstream 143756 230996 ~ 236857 (+)
CI01000204_00223112_00227527 PARGB coding upstream 153049 223112 ~ 227564 (+)
CI01000204_00392220_00393113 PURBB, PURB, PURBA, PURB.L coding downstream 7692 391676 ~ 393358 (+)
CI01000204_00472720_00477135 TUBA3A, TUBA3C, TUBA3E, TUBA1C, TUBA1A, TUBA7L coding downstream 88736 472720 ~ 477170 (+)
G388822 NA non-coding upstream 95281 284951 ~ 285332 (+)
G388802 NA non-coding upstream 95706 283898 ~ 284907 (+)
G388721 NA non-coding upstream 97036 282805 ~ 283577 (+)
G388711 NA non-coding upstream 98810 277295 ~ 281803 (+)
G388713 NA non-coding upstream 105267 274093 ~ 275346 (+)
G388805 NA non-coding downstream 11948 395932 ~ 397003 (+)
G388821 NA non-coding downstream 18832 402816 ~ 407868 (+)
G388817 NA non-coding downstream 93230 477214 ~ 478418 (+)
G388877 NA non-coding downstream 111622 495606 ~ 495999 (+)
G388799 NA other upstream 157841 220155 ~ 222772 (+)
CI01000204_00033958_00057140 NA other upstream 346121 33908 ~ 57362 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_003092 ved coding NC_007121.7 CM002894.2 44997062 ~ 45002196 (-)