XLOC_012224 (kcnk2a)


Basic Information

Item Value
gene id XLOC_012224
gene name kcnk2a
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007128.7
NCBI id CM002901.2
chromosome length 53461100
location 32657202 ~ 32698517 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00024086
CACAGACCGTGAAGTGAACACACGGAGACGGACGCGCTCATGATGAGAACAGCCCGTCCAATTATCCGTGTGCCCCCTTTGGACACTCCCTTCTCACTTCACTGCTTACTCAACCACGAAATCCAGCGCTGGATTCCAAGATACTGTTCGCATGGAGCTTTAAAACTGGACAGAGGCATGAAAGCCCAGAAGAGGAGTCGGAGAGAGGCGAGCTCGTTCGTTTGGTGTCATGATTAACGTCCCGTTTTCGCTCGTTTGCTCCTGAGATCATCTAGAAAACAAGTCAAGTGGTCCTGACCTACCTGATGAGGAGCAGCGAGAACAGCAGATCCCACAAAGTAGTAATGGCTGCACCTGATCTTTTAGATCCTAAATCAGCCACGCACAACACCAAACCACGGCTGTCATTCTCCTCCAAGCCCATCGTGTACAACTCTGGAGATGATTGTGAGAGCATAACCACCGTAATGAAGTGGAAAACAGTGCTGGCCATCTTCCTGCTGGTGGTCCTGTACCTGATCATCGGTGCCACTGTGTTCAAAGCACTGGAACAGCCTGAGGAGGGCTTGCAGAAGTATCGCATCATCCAGGAGAAGATCGACTTTCTCTCAATGCACACCTGTGTCAACACCTCGGAGCTGGAGGATCTGGTCAAGCAAGTGGTGTTAGCCATCCGGGCCGGGGTCAATCCATCCGGTCACCCCTCCAATGAGAGCAGCATGTGGGACCTCAGCAGCTCCTTCTTCTTTGCTGGGACCGTCATCACTACTATAGGGTTTGGAAATGTTTCTCCACACACAGAAGGAGGCAGGATCTTCTGCATTATCTACGCCCTGTTGGGGATCCCACTCTTTGGCTTTCTCTTGGCTGGAGTGGGCGATCAGCTGGGAACCATATTTGGCAAAGGAATCGCCAAAGTGGAAAAGATGTTTGTGAAATGGAACGTGAGCCAGACTAAAATCCGTGTGACGTCCACAGTCCTCTTCATCCTGTTCGGGTGTCTTCTGTTTGTGGCTCTTCCTGCCCTTATCTTCCAGCACATTGAAGGCTGGAGCGCTCTCGAGTCCATCTACTTTGTTGTCATCACTTTGACCACAATTGGATTCGGAGACTTTGTGGCAGGGGGCTCGGAGATTGAATATCTGGACTATTATAAGCCCATCGTATGGTTCTGGATCCTGGTGGGTCTTGCGTACTTTGCTGCTGTTCTCAGTATGATTGGAGACTGGCTTCGGGTCATCTCCAAAAAGACCAAAGAGGAGGTGGGAGAGTTTCGTGCTCACGCTGCAGAATGGACGGCTAACGTGTCCGCTGAGTTCAAAGAGACGCGCCGACGCCTGAGCGTGGAAATCTATGACAAGTTTCAGCGGGCCGCGTACATCAAACGCAAGCTGTCATCAGAGCTGGGCCAAAACCCAGGCCAGGACATGATGCCATGCAAGCGAACCCTGTCTGTAAACTTCACAGATGAACTGGAGAAGGAAGGTCTCCCTACTTTGACCAAAAACGGCAGTCTCTATCTGAATGGGCTTACTCCAGACTGTCCCGATTGCAGTGAGATTTCCATCATTGAACATCTCAAATAAGCCTCCCGAGCACATACTAAAATGTAAGCAGAGGAAGATGCGTTTGAGTCTACAGCGGTGTTTTCTCACAGAGCTATCGGAAACTTTCATGTCTTTCCTGGATGTACACAGATACAGTTTTCAACGTACTGAACTCAGAAAGAGCGTGACTTTATGTGCCAGTCAAACGAATCATTTTTTTATAAGAGATGTTTAAAAGAAGTCTGTGTTACTGAAAAGGAAATCATATTTGTGCCTTAAAACCCACCAGGAAAAGACTTCCCAGAAGCTGCTACACTGGATCCTGTGGATAAATGAAATGTATTGTGTTTTTAAGAGATTGAAACAGCAGTCTTGTCTAAACATCAACCAACTTAGGAAGCGTTTACACAtctaaacaacttttttttgtaaCTCATATTGCTTAGTTTACATGACAACAATAAAAGCAAGCTGATAATGGTTTTcatagttcatttttaaaaagcacattgtTATTATCTGCGTAACTAGTCTTGATATTGATCATCGCTATAAAGGGCCGTGCACACCGAGACGATTTTTGCTTGTGTTTTCCGTCGATGTTTAACGCctcatgactaaataaagggggttgatgtgatcgtgcacaccaaagCGCAAAACGACAGGCGTAAAAgcataattgaaaaaaaagccctcatgctcgtttttttttttttttttggtttaacaCAACCTTCTCTACCAATTAGGTTGACACTTTTGTCATCTaaccatctaacgtcaaggagtgattttgcatactcttctgctcgacgccaatCGAAAATCGAAAAGCGCCCCACAGTgcctttacactgtaaaaaattgcttaGGATTGTTGTCCTAACACAcactcaatatttatttatttttttgctgcttgtttaaactacttatttaaaatgagctgaaacaacacaattcttaagatttcatttggacaacttaatttttacatttattttcatgttcaATCTacgtaaatttgttaaaagtgttaagttaacttaatcagtttgtgttgggacaacatgaatgaattgtgtggaaccctgcatttttttacagtgcaaatagattaagttaactataaaaatataagtggattgaacataaatcaaggaagttgtctaaaaaaatctcaagaattatgttgtttcggctcattttaaataggtagtttgaataaacaacataatattttatttgaatgtgGATAGCTCTTGATTTCATTTATTACTCAAATAGATTTTTGCTAGTCGCACGTTTctattgacatttatttgaatTACAAAGCTCTACAAATTCAattcatttcccagagatgggttgcggcaggaagggcatcctctgcgtaaaaatgtgctagataagttggcggttcattccgctgtggcgaccaaggattaataaagggactaagccgaaaagaaaatgaatgaatgaatgaaattcactTCAAGAGCTCTCTAAATTAATTGGTACTagtaacacatttaaaatacagatctCTACAATTGAATTAGgtgtaaattaaatgttttactaGTAAAAGTGAATAATAGAgctatgtaaatacatttttactattaaatgACTACTGTCTAATTGTATGTAATGCAAGATGAATTAAAGAGATCTATGATTGGAGCCAAAATCATTTAGAAAGCTGTCAAACTCCCTCCAATTGTAATTCTACTAGTAAAATTCAATTGCAGAGCTCTAATTGAAAACAGACTGGAAGTCAATGGAGATGCACGACTAGTACAAGTTATTTCATAGATTGAACAAAGGAACAAAAGAGCTATCTGCTTGTGATTGTCGCTAGCAAGAAGTGATTTATAGAGCTCTCTGTATAACATTGTTACTAGTAAGGATTTAACAAGTAACACTGAGAACAGTAACACTGAGACAACAGTGGAAACATCAAATCTATCACAGACACATAGTGTTTCTTTACATACTGACATCACTAATTACTGGCCTGTACGCATAATATGGGAAACATTGACTTTTTAGCACATTGTTGTCATGTAAACTCTTAATTGTTTTTTGGACTGTATCCCAAAGTCAGCATATGTTTCTGTTTATAAACTATAACAGGGTATCTGAGTTTATGATATTGCCACAGCTGTAATTGGTGGAAGATGAGTTTCATTTATATCTTGCATTAGCACTTGTTGATAAAATGAAAGAATCCGTTTGAGAGCAGTTGCGACTGAAATGGCTTTGAAAAGCtttcagttgttttatttttttattgctataTGAAACAGAAGCATGATGCTGtaagaaaatgcttatttttgacACAATTGATTCAAATTGTTCATATGATCATTACACAATGATTAATTAGTAGTTCTATGATAATTAAGAATATGTTGTGTGTTAATgcaatgtataaatgtatttctATTGCATACTTTTTAACATTGTGTAACAGTTCTATTGGCCTTCAGCCTGCATGAGGtttaaaatgagatttttctAGAAAaggtatacactacctgacaaaaagtcttgtcacctatccaagttttaggaacaacaaacaataacttgacgtctagttgattatttggtatcagaagtggcttatatgaagggcaaagcctctagattacacttattttaccaaagtaaaatatgccttgatttttgattatttattaggacagtaaggtttaactttgcttagacaaaagtcttgtcacttcatagaaataatgtacagtatagaatataaagtcatggttaagtgggaaaagaataaatattgtgcatgactgccatgagcttggacgactgcatccacacatctctacagcaaagaaagcattcttgcaggactcccacagTTCATCAAGActttttgaattcatcttcaatgcctcctcattcatcttaccccagacatgctcaataatgttcatatctgatgactgggctggccaatcctggagcaccttgacctcctttgcctttaggaactttgatgtggaggctgacgtatgagaaagagcgctatcctgctgaagaatttgccctctcctgtggtttgtaatgggcagcacaaatgtggtgatacctcaggctgttactctgcagatctctcgcacacccccatactgaatgtaaccccaaaccatgatttttccttcaccaaacttgactgatatctgtgagaatcttgggtccatgcgggttccagtaggtcttctgcagtatttgtgatgattgggatgcagttcaacagatgattcattagaaaatctagcttctgccacttttccaaatgatcaactagaagtcaagttattatttgttgctcttacaactgagatcaatgacaagacttttgtcaggtagtgtattcggtcatcatttattcaccatcagagaatgttattaaaataataaaactaaaacaattgtATTCATTGGAATgcaataaactatatatttttttatttgaatcttAAGTGAATCCGTTAAAAACTCTATTGAACATGTAATTTTGCCTGAAATTACAggattaaatgatgacaaaatgatgATACTTTTTTTCTCCTTAAATTCGCATCATTTAATGCCAAATGTAACTTGATGACTAAAGAGAAAAATGGCCAAAGAGaatgtgttttatttctgctTATGAAAAAAAGCTATGACTTTTCAGACTGTTTAGTTACGATTTGTTTcatagtttaaataataatagcataCATTTGCCAAAACGTGCTGCTTATAGGACTAAATGTACATGAGGGATGTCCTTGAATGTTCTGTCAAATACATGTAGGTCAAAAATGTATCATAACAAAGTAACCTGCatacaatccgcttgttaagtgtgacgtcacgtggaGCGActtctgggtccaagcgctctattcaactgaatggggagattcatgaaatggtaataataaacgtttacaaagcgatttaatactttcgaaagtcacgatcgcaatatgtccatgcctaatatccgatggccagaaagtgattcattgttttataaattgttaaaattttggtatttgttatgcagcaagcccagagattgttgtgaaCACTATGACttcatgtaaaattaactttaatgtgtgataggaataaaaagtgataataaacgaatgatttctccactcaagtgaatggcggcttggacccggaaacagtattacatacgtcacaaacacgtcaccacttaacaagcagattacaTGCAGTGGACTGAGAAATCAAGTGGACAaaacctatttttatttgacattttgtttgtttgtttgtttattatagcATAAATTGAAACCGAAAGACAGTATGTAGCATCTCCTTGTAGTGTAATATAAGATTTGCATTGATAGATTTCTACGGAAAGATTTCAAACACCAGCTAAACGTTGAACTCATGACACTTTTTCAATGTAAAAATGCCATTTATTCGAGTAAGGAATATGCATATCTGTGTGGTGATGTTTTCTGCTTTAAAAACGATCTATTTTTCACAATGTTCTTGCCTTCAAGCGTTTGATTTCTCTGTTGATTGTCAGAAGAGCAGCGCCATACTAACTGTAATGACAGTGTTCATCTTGCCTTTGCTCTGTCTTCACCGCTAAACTGCTCAAATTCTTGCTTGTCAAGCTTGAATCTATCTTGTTATGCTAatatctttgtatttttttaactgcaTTTTACAAGCACTTCCTGAGCgttgtttgtgatgtttataCACTGTTTTACATCTCGGTGCTTTGCctttaaataaagcaaaaccaAAATTCTTATTCTTCAGTagactgagtttttttttatgtctagTAATA
>TCONS_00024087
TGAACACACGGAGACGGACGCGCTCATGATGAGAACAGCCCGTCCAATTATCCGTGTGCCCCCTTTGGACACTCCCTTCTCACTTCACTGCTTACTCAACCACGAAATCCAGCGCTGGATTCCAAGATACTGTTCGCATGGAGCTTTAAAACTGGACAGAGGCATGAAAGCCCAGAAGAGGAGTCGGAGAGAGGCGAGCTCGTTCGTTTGGTGTCATGATTAACGTCCCGTTTTCGCTCGTTTGCTCCTGAGATCATCTAGAAAACAAGTCAAGTGGTCCTGACCTACCTGATGAGGAGCAGCGAGAACAGCAGATCCCACAAAGTATGGCTGCACCTGATCTTTTAGATCCTAAATCAGCCACGCACAACACCAAACCACGGCTGTCATTCTCCTCCAAGCCCATCGTGTACAACTCTGGAGATGATTGTGAGAGCATAACCACCGTAATGAAGTGGAAAACAGTGCTGGCCATCTTCCTGCTGGTGGTCCTGTACCTGATCATCGGTGCCACTGTGTTCAAAGCACTGGAACAGCCTGAGGAGGGCTTGCAGAAGTATCGCATCATCCAGGAGAAGATCGACTTTCTCTCAATGCACACCTGTGTCAACACCTCGGAGCTGGAGGATCTGGTCAAGCAAGTGGTGTTAGCCATCCGGGCCGGGGTCAATCCATCCGGTCACCCCTCCAATGAGAGCAGCATGTGGGACCTCAGCAGCTCCTTCTTCTTTGCTGGGACCGTCATCACTACTATAGGGTTTGGAAATGTTTCTCCACACACAGAAGGAGGCAGGATCTTCTGCATTATCTACGCCCTGTTGGGGATCCCACTCTTTGGCTTTCTCTTGGCTGGAGTGGGCGATCAGCTGGGAACCATATTTGGCAAAGGAATCGCCAAAGTGGAAAAGATGTTTGTGAAATGGAACGTGAGCCAGACTAAAATCCGTGTGACGTCCACAGTCCTCTTCATCCTGTTCGGGTGTCTTCTGTTTGTGGCTCTTCCTGCCCTTATCTTCCAGCACATTGAAGGCTGGAGCGCTCTCGAGTCCATCTACTTTGTTGTCATCACTTTGACCACAATTGGATTCGGAGACTTTGTGGCAGGGGGCTCGGAGATTGAATATCTGGACTATTATAAGCCCATCGTATGGTTCTGGATCCTGGTGGGTCTTGCGTACTTTGCTGCTGTTCTCAGTATGATTGGAGACTGGCTTCGGGTCATCTCCAAAAAGACCAAAGAGGAGGTGGGAGAGTTTCGTGCTCACGCTGCAGAATGGACGGCTAACGTGTCCGCTGAGTTCAAAGAGACGCGCCGACGCCTGAGCGTGGAAATCTATGACAAGTTTCAGCGGGCCGCGTACATCAAACGCAAGCTGTCATCAGAGCTGGGCCAAAACCCAGGCCAGGACATGATGCCATGCAAGCGAACCCTGTCTGTAAACTTCACAGATGAACTGGAGAAGGAAGGTCTCCCTACTTTGACCAAAAACGGCAGTCTCTATCTGAATGGGCTTACTCCAGACTGTCCCGATTGCAGTGAGATTTCCATCATTGAACATCTCAAATAA

Function

symbol description
kcnk2a Enables mechanosensitive ion channel activity. Predicted to be involved in potassium ion transmembrane transport and stabilization of membrane potential. Predicted to act upstream of or within ion transport. Predicted to be located in membrane. Predicted to be integral component of membrane. Predicted to be integral component of plasma membrane. Is expressed in brain. Orthologous to human KCNK2 (potassium two pore domain channel subfamily K member 2).

GO:

id name namespace
GO:0071805 potassium ion transmembrane transport biological_process
GO:0006811 ion transport biological_process
GO:0030322 stabilization of membrane potential biological_process
GO:0005887 integral component of plasma membrane cellular_component
GO:0016020 membrane cellular_component
GO:0016021 integral component of membrane cellular_component
GO:0022841 potassium ion leak channel activity molecular_function
GO:0015271 outward rectifier potassium channel activity molecular_function
GO:0005267 potassium channel activity molecular_function
GO:0008381 mechanosensitive ion channel activity molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-061226-2 Enables mechanosensitive ion channel activity. Predicted to be involved in potassium ion transmembrane transport and stabilization of membrane potential. Predicted to act upstream of or within ion transport. Predicted to be located in membrane. Predicted to be integral component of membrane. Predicted to be integral component of plasma membrane. Is expressed in brain. Orthologous to human KCNK2 (potassium two pore domain channel subfamily K member 2).

Ensembl:

ensembl_id ENSDARG00000055123

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00024086 False 6426 mRNA 0.38 7 32657202 32698517
TCONS_00024087 True 1568 mRNA 0.51 7 32662042 32698503

Neighbor

gene id symbol gene type direction distance location
XLOC_012223 cgref1 coding downstream 20669 32630789 ~ 32636533 (-)
XLOC_012222 xkr5b coding downstream 36099 32608010 ~ 32621103 (-)
XLOC_012221 grhl1 coding downstream 230789 32391056 ~ 32426413 (-)
XLOC_012220 klf11b coding downstream 287155 32365941 ~ 32370047 (-)
XLOC_012219 CR407546.1 coding downstream 410947 32246129 ~ 32246255 (-)
XLOC_012225 cenpf coding upstream 21896 32720413 ~ 32743249 (-)
XLOC_012226 smyd2a coding upstream 47246 32745763 ~ 32779556 (-)
XLOC_012227 prox1a coding upstream 124071 32822588 ~ 32865788 (-)
XLOC_012228 NA coding upstream 435302 33133819 ~ 33138376 (-)
XLOC_012229 NA coding upstream 447077 33145594 ~ 33162478 (-)
XLOC_012218 NA non-coding downstream 521074 32127897 ~ 32136128 (-)
XLOC_012208 BX539317.1 non-coding downstream 1272654 31384434 ~ 31384548 (-)
XLOC_012203 BX571712.2 non-coding downstream 1471959 31181950 ~ 31185243 (-)
XLOC_012201 BX571712.1 non-coding downstream 1559661 31096326 ~ 31097541 (-)
XLOC_012230 AL590149.1 non-coding upstream 508263 33206780 ~ 33231714 (-)
XLOC_012233 CR628327.1 non-coding upstream 719745 33418262 ~ 33460893 (-)
XLOC_012235 NA non-coding upstream 866365 33564882 ~ 33571806 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) CI01000062_03957204_03981763 KCNK2 coding CI01000062 null 3956792 ~ 3981912 (+)