CI01000062_03957204_03981763 (KCNK2)


Basic Information

Item Value
gene id CI01000062_03957204_03981763
gene name KCNK2
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000062
NCBI id null
chromosome length 4496499
location 3956792 ~ 3981912 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000062_03957204_03981763.mRNA
GTTTTAAAACCCTGCAGGTGTCTGTGCCTTTCACAGCTGCTATTATTTATTAATGGCTCCATGTAAAAAACATAAATGTGTTTTCGTTCGTGTACAAAGACACATGGAAAATAAATATAGATCTACAGTATACATAAAGCAGGATTACAAAATTATCAGCAGTTATTTCTTTCAAATTACTGCTGCCTTTTATAACCCATCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTCATTTGCTCTCTCTTACCTTCTCTCTCCCTTTGTTCCCTCCAGTGGCTGCACCTGATCTTTTAGATCCTAAATCAGCCACACACAACACCAAACCACGGCTGTCGTTCTCCTCCAAGCCCATTGTGTATAACTCGGGTGATGATTGTGATACCATAACCACCGTAATGAAGTGGAAAACAGTATTGGCGATCTTCCTGCTGGTGGTTCTGTACCTGATCATCGGAGCCACGGTGTTCAAAGCTCTGGAACAGCCCCAGGAGAGCTCGCAGAAGTACCTCATCGTGCAGGAGAAAATTAACTTTCTCTCTAGTCATACCTGTGTCAACACCTCTGAGCTGGAGGACTTGGTCAAGCAAGTGGTGTCTGCTATCCGGGCCGGGGTCAATCCCTCGGGTCACCCCTCCAATGAGAGCAGCATGTGGGACCTCAGCAGCTCCTTCTTCTTTGCAGGGACTGTCATCACCACTATAGGGTTTGGAAATGTCTCTCCACACACAGAAGGAGGCAGGATCTTTTGCATTATCTACGCCCTGCTGGGGATCCCACTCTTTGGGTTCCTCTTGGCTGGAGTGGGCGATCAACTGGGAACAATATTTGGCAAAGGAATCGCCAAAGTGGAAAAGATGTTTGTGAAATGGAACGTGAGCCAAACTAAAATCCGTGTGACATCCACGGTCCTGTTCATCCTGTTTGGATGCCTGCTGTTTGTGGCCCTCCCCGCCCTCATCTTCCAACACATTGAAGGCTGGAGCGCTCTGGAGGCCATCTACTTTGTTGTCATCACTTTAACCACTATTGGATTTGGAGACTTTGTGGCAGGAGGCTCTGAGATTGAGTATCTGGACTATTATAAGCCCATCGTGTGGTTCTGGATCCTGGTGGGTCTTGCCTACTTCGCTGCAGTTCTCAGTATGATTGGAGACTGGCTCCGGGTCATCTCCAAGAAGACCAAAGAGGAGGTGGGAGAGTTTCGCGCTCACGCTGCAGAATGGACGGCTAATGTGTCAGCGGAATTCAAAGAGACACGGCGCCGCCTGAGCGTGGAAATTTACGACAAGTTTCAGCGGGCAGCATACATCAAGCGCAAGCTGTCGTCAGAGCTGGGCCAAAATCCAGGTCAGGACATGATGCCGTGCAAGAGGACCCTGTCCGTGAACTTCACAGATGAACTAGAGAAAGAAGGTCTCTCGACCCTGACCAAAAATGGCAGCCTGTACCTAAACGGTCTTACCCCGGACTGCCACGATCATGGCGAGATCTCCATCATTGAACATCTGAAATGCTAAAACACTGATAAAGAAGACCTGGAAGGTACTTTTGTGTCTACAGCTATGCTTCATCACAAAACTATATCTTTCCTGGATGAACTGGAATCTGTGAGAGGGTGACTTTATGCCTTGTGCCAGTGAAACGATTCTGTCTACGTTTTACAGGA

Function

symbol description
kcnk2 Predicted to enable outward rectifier potassium channel activity; potassium channel inhibitor activity; and potassium ion leak channel activity. Predicted to be involved in potassium ion transmembrane transport and stabilization of membrane potential. Predicted to act upstream of or within G protein-coupled receptor signaling pathway; potassium ion transport; and regulation of membrane potential. Predicted to be located in endoplasmic reticulum and plasma membrane. Predicted to be part of voltage-gated potassium channel complex. Predicted to be integral component of plasma membrane.

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000062_03957204_03981763.mRNA True 1683 mRNA 0.48 6 3956792 3981912

Neighbor

gene id symbol gene type direction distance location
CI01000062_03927588_03933449 NA coding upstream 22760 3927588 ~ 3934032 (+)
CI01000062_03904672_03920716 NA coding upstream 36039 3903987 ~ 3920753 (+)
CI01000062_03846495_03878349 PROX1, PROX1A coding upstream 77929 3844902 ~ 3878863 (+)
CI01000062_03608961_03614541 NA coding upstream 341339 3608843 ~ 3615453 (+)
CI01000062_03575943_03597236 EFR3BA, EFR3B coding upstream 358227 3575943 ~ 3598565 (+)
CI01000062_04000935_04003736 NA coding downstream 19023 4000935 ~ 4004205 (+)
CI01000062_04010092_04010726 NA coding downstream 27399 4009311 ~ 4010748 (+)
CI01000062_04011834_04018478 NA coding downstream 29922 4011834 ~ 4018478 (+)
CI01000062_04121615_04144068 GRHL1 coding downstream 139703 4121615 ~ 4145488 (+)
CI01000062_04160274_04162768 KLF11B coding downstream 178362 4160274 ~ 4163440 (+)
G260892 NA non-coding upstream 69861 3886637 ~ 3886931 (+)
G260795 NA non-coding upstream 117346 3838254 ~ 3839446 (+)
G260796 NA non-coding upstream 119065 3837320 ~ 3837727 (+)
G260884 NA non-coding upstream 127132 3829440 ~ 3829660 (+)
G260883 NA non-coding upstream 127415 3829103 ~ 3829377 (+)
G260902 NA non-coding downstream 1723 3983635 ~ 4005133 (+)
G260908 NA non-coding downstream 17520 3999432 ~ 4000653 (+)
G260905 NA non-coding downstream 24736 4006648 ~ 4008187 (+)
G260901 NA non-coding downstream 53467 4035379 ~ 4070400 (+)
G260904 NA non-coding downstream 98640 4080552 ~ 4082535 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_012224 kcnk2a coding NC_007128.7 CM002901.2 32657202 ~ 32698517 (-)