CI01000062_04160274_04162768 (KLF11B)


Basic Information

Item Value
gene id CI01000062_04160274_04162768
gene name KLF11B
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000062
NCBI id null
chromosome length 4496499
location 4160274 ~ 4163440 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000062_04160274_04162768.mRNA
GGAGCTCGGATGGAGGTGTGTGAGGATTTTCTGGAAGGGAAAAAGCACAGTGAGCACACTTCATGCAGTGTTCTGGAATACAATGATCTTGAGGCTGCTGAAGCTCTCGTCTACATGAGCTTCTGGAGTCAGATGTCTCCAAAACCCAGTGCCTTCAAACCTCGCCCTCTCACACCAGCGTCAGACTCTTGCGATTCTCTCCTGCCCCCCGAACCACCAGAGACCCCGAGGGACTTTGTCTCGCTCTCTTCACTGTGTATGACCCCACCACACAGCCCCAGCTTTACTGAGACCTCCAACACCACATCAGTGCCAGCCTCCCCCTCCCCACTTACCCGGCCCTGTCCCAGCCTCCCCAGCCCGAGAGCTGCATGCCCCACCATGGCCTCCATCACTCAGTTGCCATCTTCTGGGGAGCCCACAGAAAAGACCACACCCCTGCCTTGCAGAGCCATGGCAACCAGTGTAATACGCCACACGGCTGACAGCTCCCTGTATCAGAACATTCCACAAAAGACTGTTCCTTCATCACCCACCCAGTCCTGCCAACCCCAGACCAACACCACAACGGCATGCCAAAACAGCAGCAGACTTCTTCCTAAGGAAGACAAGTGCTTCATTACATCATCTCCTCAGCCGCCGCCCCCAACCTCCAGTCCACCAATCATATGCCAGATGTTCCCGGTGGCCCAACCTGGAGTCATATCAGCGACGTTTATTCAGAAGCCCAGCCCTGGGGTGAAGTCTATCTTACCACAGCCACTCCTGATGGGCTCTCAGGGCACGGTGATGTTCGTGATGCCCCAGTCGCCAGTGTCTTCGGCTCCACAGTGCCAACAGACTGTTATGACCCTAGGCAACACCAAGCTCTTGCCTCTGGCTCCCGCGCCTGTTTACGTGCCCTCGGGGCAGAGCAGCACCACGCAGGTCGACTTTTCCCGCAGGCGCAACTACGTCTGCAATTTCCCAGGTTGCCGGAAGACCTATTTTAAAAGCTCTCACCTAAAGGCGCATCTCAGAACCCACACAGGAGAGAAACCTTTTAGCTGCAACTGGGAAGGCTGCGATAAGAAATTCGCTCGCTCTGACGAGCTCTCACGGCATCGGCGAACACACACAGGGGAAAAGAAATTTGTCTGCCCGGTGTGTGACCGGCGGTTTATGCGCAGCGACCACCTCACCAAGCACGCACGGCGACACATGACCACCAAGAAGATCCCATCCTGGCAAACGGAGGTGCGGAACCTCAACAAGATCACCGCAGCCAAGGCCTTGCCCACTGGCACAGCACTACCGGTCAGCATGTTGCTGCCAGCCTCAAACTGACTGTGATGGAGACTGAACTCTAAACCCTCACCAATCTTATGCAGGGACTCGTTTTATGAGGGCAAGGCTGCTGATTCCCTCATGGGCAAAAAACGTGATTATGCACTGGACTCTTTGCTGCACATATTTCGCACTCTGCAATGGAACATTTTGTTTACTATTGTGTAAAAGATTTATGCACTCTTTTGCCAAAGTCTTTGTACTATGTTTGTCTTAAAATGTATTCCTTTTTCTGCTTCTTCTTTTTGTATACATTTATATGTACATATCTAATGGAAATGTATGATGTATGCTAAACTACACAAAATTAGAAAAATATGTAAAAATGTATATGTGGATAATTATCTACACTGTGATTATCATATAATACTTTTATTTAATACTCTTTTTTTTTTATTAAACAGTGAAGATTAAGTGTGTTTTTTTGGTTTTCTTAAGCACTCGAGACTTGTCAAGACTGTTCTGCTTTTCGCTGCTCTTGGCGGTAACAGAACTTACTCACGTTGCTGACATGATGCATCACTTCCTGTCGGATTCGTGAGGTCTGTGTACTGGAACTTTTGTCTCACGCATCATCTTTAAAATCTCAGCAGCAAGTTGACACGTTATTTCATTCGCTGACAGTAGCCATTAGCTCAGTAAAAAGTTTACAAAGTTTACCCTTTATTTAAA

Function

symbol description
klf11b Predicted to enable DNA-binding transcription factor activity, RNA polymerase II-specific and RNA polymerase II cis-regulatory region sequence-specific DNA binding activity. Predicted to be involved in regulation of transcription by RNA polymerase II. Is expressed in liver. Human ortholog(s) of this gene implicated in maturity-onset diabetes of the young type 7 and type 2 diabetes mellitus. Orthologous to human KLF11 (Kruppel like factor 11).

GO:

id name namespace
GO:0046872 metal ion binding molecular_function

KEGG:

id description
K09209 KLF10_11, TIEG; krueppel-like factor 10/11

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000062_04160274_04162768.mRNA True 1998 mRNA 0.49 3 4160274 4163440

Neighbor

gene id symbol gene type direction distance location
CI01000062_04121615_04144068 GRHL1 coding upstream 14786 4121615 ~ 4145488 (+)
CI01000062_04011834_04018478 NA coding upstream 141796 4011834 ~ 4018478 (+)
CI01000062_04010092_04010726 NA coding upstream 149526 4009311 ~ 4010748 (+)
CI01000062_04000935_04003736 NA coding upstream 156069 4000935 ~ 4004205 (+)
CI01000062_03957204_03981763 KCNK2 coding upstream 178362 3956792 ~ 3981912 (+)
CI01000062_04184671_04191613 NA coding downstream 21231 4184671 ~ 4191677 (+)
G260999 NA non-coding upstream 10760 4149292 ~ 4149514 (+)
G260997 NA non-coding upstream 13103 4146956 ~ 4147171 (+)
G260985 NA non-coding upstream 52089 4107985 ~ 4108185 (+)
G260975 NA non-coding upstream 69764 4090257 ~ 4090510 (+)
G260974 NA non-coding upstream 70266 4089804 ~ 4090008 (+)
G261005 NA non-coding downstream 1670 4165110 ~ 4165368 (+)
G261006 NA non-coding downstream 1942 4165382 ~ 4166002 (+)
G261065 NA non-coding downstream 94451 4257891 ~ 4289668 (+)
G261478 NA non-coding downstream 145245 4308685 ~ 4309226 (+)
G261616 NA non-coding downstream 287455 4450895 ~ 4451151 (+)
CI01000062_03904672_03920716 NA other upstream 245124 3903987 ~ 3920753 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location