CI01000062_03608961_03614541


Basic Information

Item Value
gene id CI01000062_03608961_03614541
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000062
NCBI id null
chromosome length 4496499
location 3608843 ~ 3615453 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000062_03608961_03614541.mRNA
GCATTAAACCATGGGGAAATAAGTTTTACCAGTCTGAGAACCCAAACAGGATTCAGGGTCTGATGAGGATTTCACTCCCCAGTCCTTACTTTTCTGGAAAACTTCAGTCTTTTGCAGAATGAGGTTGTCTGTGATGTATGCTTTTTGGTCAGCATGGGCCCAATTTCTTGGTGTCAAATCCAAAGACGCTGTTGAAGAGTCTAAAACAGACACTTCTCAGGGTAACACACATCGAGTTAGCAGTGGTCTAATGCAGTGTGGTGAATACAGCAATGAAGTGATGCCAAATGGACAGTGTCGTTTAATAGCCACATTACCCCAGCTGGAGGAACAGCGGTGTCCTGACATGTTCCGCTGTACAGATGAGGTCTCCTACTGGCTGCGTGAGAATGAAGAACGCAAGCAGCAGATGCAGGACCTGAAAGAGACCATCTCAGAGCTTCAAGAGGAGCTGAGGAATCACAGGCATCGCATCAAAGTGCTGGAGTTGCAGAGCGAGGAGAAGTATGGAGTAAACTCGTCTTTAGAGCATCGCTTTCACACGCTGCAGCAGATCTATGAAGAGGCCAATGCGCTGCTGCATATCCACGGATCACTCATCTATGAAATGCAAACACAAATTCGCAACCTCACTATGATAGTAGACCGTGTGAGGCGCAATCCAGGCTGTATGATCAATATCATCCGCACAAGCCCGCTTCTCAGCGCCCAAGATACCCTTCACCCAGAGGTTCAGCACGTAAGAAACTGTCCAATTGACTGTGCATCACTGTTCTACAATGGAGTCCACCGATCTGGGATTTTTACTGTTGTGCCCTCGTTGGGATCGACTCCAGTGGAAGTTTATTGTGATATGGAGACTCAAGGAGGTGGATGGACCATGTTTCAACGTCGGCAGGATGGAAAGGTCAATTTTAACCGCAAATGGACAGAATACAGGGATGGCTTCGGAGATCTGCATGCAGAATTCTGGCTGGGAAATGACCACATCCATGATATCTCCAGCCAGGGAGAGTATTCCCTTCGCATTGACCTCGAGGACTGGAATGGCAAGCACAAACACGCACTGTACCAGAACTTCTGGTAAACTTTTGGAAAGATAGTCTGATTACTTCAACTAAGAACATTTCCTTATTTTTTGATTTCAGTATACTTTGATAAAATAATTTAATAATATTAAATATTATTAATACATTTAAATTAGAAAAAATACAATTAATAATAGTAATATGAAGGCTTGTTTCCGCCATGGAATAAGAAAATAAAAATTGCCACTTTTTATCCTGCAATTGCAAGTTTATATTTCACAATTCTGAGAAAGAAGTCAGTCATGTGAGTTTATATCTTGCAATATGTTTTTCTCAGAATTGTGAATTTTTTGCAATTATGCTTATATTGCACAATTCTGACTTTTTTTAATCTTGCTGTTCAGTTAATATCTCACAATTCTGACTTTTTTTCTTCGCAAATCCGAGTTTATATCTCACAATTCTGAGAAGAAGAAAAAAAAAAAAAATCAGAATTGTGAGTTACAGGCCCGGTTTCACAGACAGGGCTTAGATTAAGCCAGGATTAGGCCTTAGTTCAATTAGGGCATTAAAGAATATAAACATGCCATAAAAAACATTACTGGTGTGCATCTTGAGACAAAACAATGGCCCTGACATTTTTTAATATAAGTCAGTCTAAGTTGCTTTCAGTTACAACAGCTCAAACATGCATTTTAGCCTGGGACTAGCTTAAGCCTTGTCTGTGAAACTGGGGGATATTCTCACAATTGCAAGAAAAATTGTGAGTTTATATCTTAAAATTCTGATTTTTTCTCCCAATTGTGCTTATATTGCACAATTCTGACTTTATCTCGCTGTTCAGTTTATCTCACAATTCTGACTTTATTTCTCGCAATTCCGAGTTAATATCTTACAATTCAGAGAAGAAAAAAAAATATATCAGAATTGTGAGATAAACTGAGTAACAAGATAAAAATCAATTCTCTCAA

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000062_03608961_03614541.mRNA True 1999 mRNA 0.40 4 3608843 3615453

Neighbor

gene id symbol gene type direction distance location
CI01000062_03575943_03597236 EFR3BA, EFR3B coding upstream 10278 3575943 ~ 3598565 (+)
CI01000062_03487108_03498318 ECT2L coding upstream 109962 3487108 ~ 3498881 (+)
CI01000062_03480918_03482967 CCDC28A coding upstream 124734 3480918 ~ 3484109 (+)
CI01000062_03422781_03423731 TMEM121A, TMEM121B, TMEM121 coding upstream 184094 3421906 ~ 3424749 (+)
CI01000062_03313225_03326549 NA coding upstream 282118 3312194 ~ 3326725 (+)
CI01000062_03846495_03878349 PROX1, PROX1A coding downstream 229449 3844902 ~ 3878863 (+)
CI01000062_03904672_03920716 NA coding downstream 288534 3903987 ~ 3920753 (+)
CI01000062_03927588_03933449 NA coding downstream 312135 3927588 ~ 3934032 (+)
CI01000062_03957204_03981763 KCNK2 coding downstream 341339 3956792 ~ 3981912 (+)
CI01000062_04000935_04003736 NA coding downstream 385482 4000935 ~ 4004205 (+)
G260698 NA non-coding upstream 3756 3601286 ~ 3605087 (+)
G260745 NA non-coding upstream 111675 3496865 ~ 3497168 (+)
G260741 NA non-coding upstream 120052 3488543 ~ 3488791 (+)
G260700 NA non-coding upstream 137152 3460658 ~ 3471691 (+)
G260723 NA non-coding upstream 223865 3384764 ~ 3384978 (+)
G260764 NA non-coding downstream 2823 3618276 ~ 3618638 (+)
G260768 NA non-coding downstream 23165 3638618 ~ 3639073 (+)
G260779 NA non-coding downstream 40760 3656213 ~ 3656451 (+)
G260803 NA non-coding downstream 90294 3705747 ~ 3705968 (+)
G260810 NA non-coding downstream 99336 3714789 ~ 3715088 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location