CI01000062_03422781_03423731 (TMEM121A, TMEM121B, TMEM121)


Basic Information

Item Value
gene id CI01000062_03422781_03423731
gene name TMEM121A, TMEM121B, TMEM121
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000062
NCBI id null
chromosome length 4496499
location 3421906 ~ 3424749 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000062_03422781_03423731.mRNA
ATATAAAAAGAAGGAATTTTAAATTAAAAGTATTCAGAAGTGTTCAATCACAGAAAGAACCTGAGGAATGAGGTTAGATGTTAAAGAAAAAAGACCTTGAAATCATAATTCAGGCTATATTGTGTCCTGTTCTATGTACTGTAAGTGACTGAATGCTTACCTTTACGCACAGAAACGTATTCCTGTTTGGATATTTAAACATGACAAATGCAGTGTCCTTCAAAACTGCTAAATCCTATTCAACATAAAAGGCTTCAGAGAAATGTGAAACAAACCCAAGGACCTGTGGGATGGTTAGTTACACCTGATTGTGCTAAATTACCACAGTGACCCCTAGTGTTTTGTTTTAAAGCTTCACCAGTTGGAACAAGGTCAAAAACATTCTCTGAAGAGAACAAATTTTTCTTTCTTTAACAGATGCTCCAAGCCGGCAGAGCAGAAAGAGAGCTGTGACCTCCCCTTCCGTCTTCACGACTGACGATACTCCTGTGCACGCTTGGCTCCGATGCTGGAGTAAGAGACAACAAGAGACCAGCACAGCCATGCTGTTTATATGGGTCAGCTGACACAGACAAGCAGGCCCATGTCGGTAGGAAATCGACACAATCTGCCTCAGCAGTGGATACACGTACAGATATATCACGGTCACGTTGAATCATTGAAGAGACATTGACATACTAAACTACTGTGGAGGCCATGTGAAGCTCGAAATGCGGTAAAGAGCGGCCATTGGACTGTGTGGAGCTTTGCTAAACGGGCTCCTCAGTCACCACCAGCATCGATGGACAACGGATTGCACACCATGAACTAACCTTGCTACTTTTTTTGAAGGATACGATTTGTTCGTTATTTTACTTCGATAAACAGACAGCACCATGGTTCTGCCGCCACCCGACAAGCGGCATGTGTGTTTAACCACCATTGTGATCATGACCAGCATGGCCTTCATGGATGCCTACCTTGTGGAGCAGAACCAGGGCCCACGCAAAATCGGCGTCTGCATCATCGTCCTGGTCGGAGATATTTGCTTTCTTATAGTGCTGCGTTATGTGGCGGTTTGGGTGGGTGCTGAGGTAAGGACTGCGAAGCGAGGCTACGCCATGATCCTCTGGTTCCTCTACATCTTCGTTCTGGAGATCAAGCTCTACTTCGTCTTCCAGAACTACAAGGCTGACCGTAAAAGTCTGGAGACGGTAGCTCGGAAAGCATTGACTTTGTTGCTCTCGGTTTGCGTACCCGGACTCTACCTTGTCCTGGTCGCACTTGACAGCATGGAGTACGTAAGAACCTTTCGGAAGAAGGAGGACATGCGGGGTCGACTATTCTGGGTGGCTCTTGACCTTCTGGATGTCCTGGACATCCAGGCTAACCTTTGGGAGCCACAGCGGACAGGTCTGCCCATCTGGGCCGAGGGTCTGATGTTCTTCTACTGCTACATCCTGTTGCTCATCCTGCCTTGTGTTTCTCTGAGCGAGATCAGCGTGCAGGGCGAGCACGTGTCGCCTCAGAAGATGATGCTCTACCCGGTCCTCAGCTTGGTGACCATCAACATTGTCACCATCCTCATCCGAGGTGTCAACATGGTGTTGTTCCAAGACAGCCGAGTCTCGACCATCTTCATCGGGAAGAATGTTGTTGCCATCGCCACTAAGGCCTGCACCTTCCTGGAGTACCGGCGGCAAGTTAAGGAGTTTCCCCCGCAAGATCCTGCTGGGATTGCAATGGAGATACAGCAGAACTCTGTGCCACACAATCAAACTTTACCGAACGCCACGACCACCCTTCCCGAAGAGCACTCACCGGCCCGCGAGGTCATTGACACGTGACCAGAGCTGACAAAAATGTCAAAGACTTTAATGTTAAGGGGGGAAGAAGAAAACCTTAGTTAGTTTAGACCAGGAAAATATGAAGTATCCTTCTTCTGGTCCCTTTACTACTGAGCAAGGAGTTTTTGAAGAATATTTTTAAAGTGCAACTCATCTAGGCTGAGTGTTCAAAGGCCATTGATGCTCGGATGCACAAATGGCAGCTCACAAGATCTTGATTTTAACCAGATTTTGTAATTTCACGCAGCTGTTTTGTGACGTTAGATATGGGATGTTTTTAAAGAGATTTGTGTGATGGTGGATCACCTTGGAATCTGCACAGATTTCTGTAGAATCTGAATGCTTGTCGTTTTCAAAGTTCCTCAAAGTTGCCCTGCCCTTTGTGTGTTCATTTATAAAATATTTTGGCTAGTTTGAATATGCTTTCTGCTATCAATACTCTCAGCTCATCATGTTTAAATCAATTTCACACAATTCTGCTGATTTTCCCTCCGAAAATCTGTGCATAAAATGTGAGGAAATTCCCATCTGGGCTTGCTGATGAGTGAAAAATGAGAAACGAAGCACACCAAGTAGTTAAGTCCACTCCTCTTACCACAATCTGTAAACAGATCTGAGGCAAGAAGTGAACTTCAAATTATGTTTGAAAGATTTGTGTGATTTGAAGATGAAAATCATTTTTTTGCGTGTTGAGATGTGAGCATGTTTTAAAGTAAAACAACTCTCACAGGATTCTTTTCCTGGGGATTCAAATGGAAACTAGAAACTTTTAATTAGCCAAAAACAATTTTCAGTCTTTATTAAGTTTTGTATGCCTGTATGTGTGGGTGGATAGAATGGAAGAGAGTACGGAAGAGAGTTCATTAGAAAAAACAGATAATATTGGATGATAATACATGAATTAATATACAGTCCAGTCATGTTTTTAAAGAGGATCATTGTATTATTATTATGATTATTATTATTATCTTGTTTTTCTTTTCTTTTAGATGTGACATTTTAAATGTTGCAAAGTGTA

Function

symbol description
tmem121b Predicted to be located in membrane. Predicted to be integral component of membrane. Orthologous to human TMEM121B (transmembrane protein 121B).
tmem121 Predicted to be integral component of membrane.

GO:

id name namespace
GO:0016021 integral component of membrane cellular_component

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000062_03422781_03423731.mRNA True 2844 mRNA 0.43 1 3421906 3424749

Neighbor

gene id symbol gene type direction distance location
CI01000062_03313225_03326549 NA coding upstream 95181 3312194 ~ 3326725 (+)
CI01000062_03308286_03311512 DNAL1 coding upstream 109474 3308286 ~ 3312432 (+)
CI01000062_03059551_03060037 NA coding upstream 361704 3059464 ~ 3060202 (+)
CI01000062_02884548_02919912 NA coding upstream 501631 2883254 ~ 2920275 (+)
CI01000062_02804022_02857974 NA coding upstream 563879 2801162 ~ 2858027 (+)
CI01000062_03480918_03482967 CCDC28A coding downstream 56169 3480918 ~ 3484109 (+)
CI01000062_03487108_03498318 ECT2L coding downstream 62359 3487108 ~ 3498881 (+)
CI01000062_03575943_03597236 EFR3BA, EFR3B coding downstream 151194 3575943 ~ 3598565 (+)
CI01000062_03608961_03614541 NA coding downstream 184094 3608843 ~ 3615453 (+)
CI01000062_03846495_03878349 PROX1, PROX1A coding downstream 420153 3844902 ~ 3878863 (+)
G260723 NA non-coding upstream 36928 3384764 ~ 3384978 (+)
G260720 NA non-coding upstream 41142 3379795 ~ 3380764 (+)
G260719 NA non-coding upstream 42150 3379374 ~ 3379756 (+)
G260673 NA non-coding upstream 68462 3353238 ~ 3353444 (+)
G260669 NA non-coding upstream 76310 3345346 ~ 3345596 (+)
G260700 NA non-coding downstream 35909 3460658 ~ 3471691 (+)
G260741 NA non-coding downstream 63794 3488543 ~ 3488791 (+)
G260745 NA non-coding downstream 72116 3496865 ~ 3497168 (+)
G260698 NA non-coding downstream 176537 3601286 ~ 3605087 (+)
G260764 NA non-coding downstream 193527 3618276 ~ 3618638 (+)
CI01000062_03904672_03920716 NA other downstream 479762 3903987 ~ 3920753 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_012234 tmem121aa coding NC_007128.7 CM002901.2 33501766 ~ 33552363 (-)
bowfin (Amia calva) AMCG00000350 tmem121a,tmem121,LOC107594772,LOC107377718,LOC107674105 coding CM030141.1 CM030141.1 11570345 ~ 11571229 (+)