CI01000062_02804022_02857974


Basic Information

Item Value
gene id CI01000062_02804022_02857974
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000062
NCBI id null
chromosome length 4496499
location 2801162 ~ 2858027 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000062_02804022_02857974.mRNA
GTTTAAAAAAGAGAGCTAGTGGAAATGCAGTACCACCACCATATAAGTGCTAGAAATATTATCAAGACAAAATCATTTTAATATTGTTTATAAATATAATACTCTGGCTGGTATGTAGCTGAGTACATATTCAGACTTTTACAACTGTCTGTGTGTTGTAAGAAATATTGCAATCATCCACTGTTCCCACGTAACATGAAATATTGTGACAGGATAGCATGTTTTATCAGTATCACCAGAAACCCTGTCTGTGGTGAACATTTCTGAACTTCCTCATCATTGAAATACAGCACTAACAGAAGTTATAAATCACTTTAGTGCAGGCCTTCCTCTCCCATGATGCATAACTCTCTGTTGAATGTATAGCCACAACATATTAAACTACCCAACTGTAACTGTGAACTCTAAATCATATTAATCTTTATACAATGATCTGAAACCAGTTTTGCAGTTTGTCTTGTTGTGAAAGGGCAAGTTTTGCAGTTTAGTACTTAATGCTTCACATCTTTCAGGTTTAAGTGTTAACGTTTAACTGACAGGATTGAGATGACACAAACTCTGAATCAACATGCACCACTGCCAGTTATTTTAGAACTGTACATTTTTGACATATGGGCGTCACTTGGACACAGTCACCGATATCAAATTACTCTAAATTGTAATATAGACACATGCATTTTTTGTAAAGCTGCTTTGAAATATGTATTGTGAAAAGCGCTTTTTATATAAATGTGAATTGAATTGATCTTGTAAACATACAACATTTCATGCTGTGCATTACAGTTCCGGCCACAAAATAGCCAAGTGGTGAAATAACCAGTTCAGACCAGCATGAATTTCCACATTGGTTCTTCTAGTTTGGTTTATGTCAGTTAGTTCTGCTTTGGTGGTGGTCTAGCTGGTGGAACATGGTGAAGCTGTTTGAGTAAGAAAGTCTTGTTACTTAAAGGATTAGTCCACTTCAGAATTCAAATTTCCTAGTAATTTTCTAAAAAATATATATAAATAAAAATAATATACTTTTTAACTACAAATGCATTTCGAAATCATGTTGAAAAGGCCACGTGTGACATAGGCGGAAGTACTGATCCAGTGTCTACAACGTGAACGTGCAACGACATGCCTTTACCAAAAAAAAAAAGGTAAAGGTAAAAGATTTTGAAGTTGGAGGAGAAAAATTACATGGAATTTTTCACCCTACCGCGGTACTTAGCGGACCTTTCCAACGTAATTACGTAATGCATGGCGTGTCGCAGAGCCAGTGCAAGATGAGCATTATATATATAATTTTTTTTTTTAGAAAATGACCGATTGTTTCTTTAGATAAGACCCTTATTCCTCGGCTGGGATCATGTAGAGCTCTTTGAAGCTGCGCTGAAACTGCAATTTTGACCTTCAACCCGTTGAACCCTTTTGAAATCCACTATATGGAGAAAAATCCTGGAATGTTTTCCTCAAAAACCTTAATTTCTTTTTGACTGAAGAATGAAAGACTTAAACATCTTGGAGGACATGGGGGTGAGTAAATTATCAGGAACTTTTAATTCTGAAGTGAACTAATCCTTTAAGATCAAATTGTCAAATTGCCTGACGATGTCGTTTTTTTTATTATTATTTTTTGTTTCTTCCAATAAACATTCAAATTATTATATCACAATCAAGTAAATGATATTGAGGTGAATGGGAACACTATAGCCTCTGATATACTCATGGCAAAGTTCTTTGTCGTTTTTCACTTAGGATTAAAAAGAAATTTAACATTCTGGAGCAGCGGTATACTGTTAGCAAAAATTCCAGTGTCACTCATGCTGCTGGAAGTGGCGTTTAGATGAATATGTAAACGTGGTGTGTGCTTTTCTGTCCATAGCAAAATAAACATACAGGAAAAAATGACAGCGGTGAGAAAACGGCTGTTAAGAAAGCATCATAGCGATGTGGATNNNNNNNNNNAAGTTCTTTGTCGTTTTTCACTTAGGATTAAAAAGAAATTTAACATTCTGGAGCAGCGGTATACTGTTAGCAAAAATTCCAGTGTCACTCATGCTACTGGAAGTGGCATTTAGATGAATATGTAAACATGTCATGTGTGCTTTTCTGTCCATAGCAAAATAAACATACAGGAAAAAATGACAGCGGTGAGAAAACGGCTGTTAAGAAAGCATCATAGCGATGTGGATAAGTTGCACCAGCCAAAAAGTTCTCTTTAGCAAACTCCTAAAACAAACTCCGAATTGACTTTGTTTGGCCTAATTTTGTTCGAAATGATGTCTCTCACCAATTCGTTTTTCAATTTCACTTGGGGCCACTCAGGGTCTTGACAGATAGTTTTCTATCGACGTCATACGCTGGAACTCAACTCTCTCGTGAGCGTGCGGACGGCCGTTACTGGAAGCCAGTTATTATAGTATATAAAGTTATAAATATGGATAATTTTCATACAAAACCCATCGCTTCACTTCAGAAGGCCTATATTAACTCTCTTGAGCCGTGTGGATTACTTTTATGATGGATGGTTGCGCTTCTTTTTTGGGCTTAAATCTTGAGCCCCATTCACTACCATTATAAACCTTGGAAGAGACAGGATATATTTTAATATAACTCTGATTGTGTTTGACTGAAAGAAGAAAGTCATACACACCTAGGATGGCTTGAGGGTGAGTAAATCATGGGATAATTTTAATTTTTTGGGTGAACCAACCCTTTAAATCTCAATCTTAATTTTTTTTATTTGTAGCTACTTGCACATCTATGAAATACTGTTTTTGTCATATGTAGTCTTTCTGAAACTGGGCTCTCGTGTATTTTCTCGTTGTTGTCTTCAGCAGGACCTTTTATCTTTTGTTGATCGTGCACTGCTGCCATGGAAACACTTATAATAGTTCATTTACTTGCCGCTCAGACCGAAGAGCGACACATTCCTCAGCAGTTCTTCTTCCTGCCTGGTTTGCTCTCATTCTCACGCTTTCTCTCTATCTCCATATGTGGAACCTCATCCACTAGTCCAAAGATCCTTTCAAGTAAAGTAACACTAAGGGTTTGTGCTGAAGCACCTTCAGCCATCGGCTTATTCCTCCAAGCTACCATACACCATGTTCTTGTATTCACCGCGGTGTGTGTCAGCCTCCTGCAGAGGGTAGAGATCACAGCGGGCGCAGCTGCTATGTTTAGCCCAGTCCTTGTGTGCCTACGCTGGGTACGGCCTCATCCCCTAAAGCCTGGCTCACCTAATCAGCCCTTGTGTAAATCACCAGCAGATGGGGTGCTGACCTCAGGGACTTTTGGAGGCAGCGTGTGGGACTCTGCGTTGGCTGTATTGGTGAGAAGAGAAAATTCATGGTCCTGGTCTACAGCATCTCGCTATAATGAGATCTGTGAAAGTCGAGGCCAGCTGGGCACAGCGGGGCAGCTTCCCACGGGCCCGCTGTTTACGGTCCGACCCCATAATGCCAGTTTACTTCTAGCTCACTGTGGGTCTCTTAACATACAATATAGGTGGTGTATCTCGTGGTGTGGAAATAACTCTCTACCTCTGTCTTTGGTGTATGGAAAATGGGAAGTCAGCAAAGATGATTCTCTGAAAGACCTTAAAGATTGCAAACTTGGAGGTGGAACATTCCAAAGTCTCATCAAGGCATGCAGAACGGATTCTGCTAATCCAATGGTGGAGTTTCTTTCATCTATTGGCTTTTGCCTGAGAGCGCTCTCATCTGTTTCCAGTGTGAGTCCTGAGAGAAAACAGGCAGGTAGTGAAGGAAGATCTCATCCTTTGTCATTTGCTTGTAATTTGGCCCATCGTAAGGGTGAAAAGAAACTCATTCTGAATGAGTTAAAGCACCATCATCTGTCTCTGGCTAATGGGATTGTTGGTGTGAGTCTGGCAGTGAGCAGAGCTCAGTGTGCCTGTGTGAAGGGTTACGGCCAGTGCACTCACCCTGGTGGCAAAGAGCGACCAGAGATGTCCAGTATCCAAGTCAAAGCCAGACACTCACAGTCAGAGCTGGTACACTCGTCTAGACTGAACTCAAGGAAAAAAGAGAAAGAAAAAGTAGAGGAAGAGGAAGGCTTCGCTCTACAAAAAGCAAAAAAAGCAAAAGTTGTGTGGTGCAGAACACTCCGGAAGCCTGCTGCGCCAGATATAGCAGGCCCCCCTGCCGCGCTCCAAAGCTGCCGGCCACAATGCAAGCAGGTGGCCGTGCCGCCTCGCTCAAAGAACGGGCATGCTGAGTGGGTGTCAGGCGACAGAAAAAAAATTCCAAAAATCCCCACTGACCTCCAGCCTTGCCTGTGCTCGCCAAAAAACGGCGACAGCAGTTTTGGGTTGTCCGCTTTTTTCTTTCGCTTTTTGTGCGCCGGCGTATTGTGCGACACAACGAATCCCAGCTTTTTTTTCCACGCCGAAGCTTTCACGAGGCCTCGCGTCCGAATGGGACCTTTAAACCCCCACCTGTGCATTATGACTCCAATAAACCTGTTATCAGCTCATGAAAGTGATGGCAAACAGTGGAGAGCGAGAGAGATCTATTCTCGCCGGCTCTATTCAAGGCTATTATATGGAGTCAGCAGCATTATATCCACTGTTGCGGTGCACAGGACCTCACCTTTATCTGGCAGCACAGCCCTGCAGCTGTGCCTCTGGTCTTTTACCCCACGCTGGCACAATATACAGCATACAGATTGTAGTGTTCACTTTTTTGCTGAGCCCAACCAAACCGGCTGTGTCAGTGAACTCTCTCTTGTCTACCAAACCGCTGCAATGTCCTTACATCGCTTTGCATTTGTGTACCGCTCGCTTGAACAGACAGCGCACTGTGTAGCAAGCCAGTGCGACCACAAAAGGGCCTCAAAAAGGGCCTACAAATCCTCTCTAGAGAACAAATGTGGATTAGTTATTGTGGGGCAATTAACTGTAGCTGAAAATTCTCAAAATTTGTCTTTTTGATGAATATTCAGTATATCTAGTTTGATGTATTCGCTCTGAAATGGCTTGATTGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000062_02804022_02857974.mRNA True 4992 mRNA 0.41 14 2801162 2858027

Neighbor

gene id symbol gene type direction distance location
CI01000062_02663074_02721051 KIDINS220B, KIDINS220, KIDINS220A coding upstream 78657 2663074 ~ 2722505 (+)
CI01000062_02613774_02651046 MBOAT2, MBOAT2A coding upstream 149608 2613774 ~ 2651554 (+)
CI01000062_02568836_02570636 NA coding upstream 230288 2568836 ~ 2570874 (+)
CI01000062_02479461_02482385 ITGB1BP1 coding upstream 318245 2479461 ~ 2482917 (+)
CI01000062_02454917_02471212 ADAM17A, ADAM17 coding upstream 327829 2454473 ~ 2473333 (+)
CI01000062_02884548_02919912 NA coding downstream 25227 2883254 ~ 2920275 (+)
CI01000062_03059551_03060037 NA coding downstream 201437 3059464 ~ 3060202 (+)
CI01000062_03308286_03311512 DNAL1 coding downstream 450259 3308286 ~ 3312432 (+)
CI01000062_03313225_03326549 NA coding downstream 454167 3312194 ~ 3326725 (+)
CI01000062_03422781_03423731 TMEM121A, TMEM121B, TMEM121 coding downstream 563879 3421906 ~ 3424749 (+)
G259932 NA non-coding upstream 317032 2483095 ~ 2484130 (+)
G259987 NA non-coding upstream 408073 2392807 ~ 2393089 (+)
G259985 NA non-coding upstream 409672 2391188 ~ 2391490 (+)
G259984 NA non-coding upstream 410320 2390593 ~ 2390842 (+)
G259983 NA non-coding upstream 411382 2389508 ~ 2389780 (+)
G260054 NA non-coding downstream 4313 2862340 ~ 2880526 (+)
G260094 NA non-coding downstream 32412 2890439 ~ 2891693 (+)
G260399 NA non-coding downstream 46266 2904293 ~ 2904594 (+)
G260401 NA non-coding downstream 49062 2907089 ~ 2907396 (+)
G260414 NA non-coding downstream 58165 2916192 ~ 2916433 (+)
CI01000062_03904672_03920716 NA other downstream 1046484 3903987 ~ 3920753 (+)

Expression


Co-expression Network