G260401


Basic Information

Item Value
gene id G260401
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000062
NCBI id null
chromosome length 4496499
location 2907089 ~ 2907396 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU295590
TCGCATTGTTCTTTCCATTTATTTTAAAGGGGACCTTTAATGCCCCTTTTACAAAATGCAATATTTGTGTCTGGTGTCCCCAGAAAGTGTCTGTGAAGTTTCAGCTCAAAATACCCCACAGATCATTTATTATAGCTTGTCAAATTTGCCCCTATTTGGGTGTGAGCAAAAACACGCTGTTTTTGTGTGTGTCCCTTTAAATACAAATGAGCTGCTGCTCCCGGCCCCCTTTCCAGAAGAGGGCGGAGCTTTAACAGCTTGCACTTTGGTTGCTCAACAACAACAAAGCCAGAGAATCCCACGCAGCC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU295590 True 308 lncRNA 0.44 1 2907089 2907396

Neighbor

gene id symbol gene type direction distance location
CI01000062_02804022_02857974 NA coding upstream 49062 2801162 ~ 2858027 (+)
CI01000062_02663074_02721051 KIDINS220B, KIDINS220, KIDINS220A coding upstream 184584 2663074 ~ 2722505 (+)
CI01000062_02613774_02651046 MBOAT2, MBOAT2A coding upstream 255535 2613774 ~ 2651554 (+)
CI01000062_02568836_02570636 NA coding upstream 336215 2568836 ~ 2570874 (+)
CI01000062_02479461_02482385 ITGB1BP1 coding upstream 424172 2479461 ~ 2482917 (+)
CI01000062_03059551_03060037 NA coding downstream 152068 3059464 ~ 3060202 (+)
CI01000062_03308286_03311512 DNAL1 coding downstream 400890 3308286 ~ 3312432 (+)
CI01000062_03313225_03326549 NA coding downstream 404798 3312194 ~ 3326725 (+)
CI01000062_03422781_03423731 TMEM121A, TMEM121B, TMEM121 coding downstream 514510 3421906 ~ 3424749 (+)
CI01000062_03480918_03482967 CCDC28A coding downstream 573522 3480918 ~ 3484109 (+)
G260399 NA non-coding upstream 2495 2904293 ~ 2904594 (+)
G260094 NA non-coding upstream 15396 2890439 ~ 2891693 (+)
G260054 NA non-coding upstream 26563 2862340 ~ 2880526 (+)
G259932 NA non-coding upstream 422959 2483095 ~ 2484130 (+)
G259987 NA non-coding upstream 514000 2392807 ~ 2393089 (+)
G260414 NA non-coding downstream 8796 2916192 ~ 2916433 (+)
G260425 NA non-coding downstream 14657 2922053 ~ 2922322 (+)
G260433 NA non-coding downstream 21061 2928457 ~ 2928676 (+)
G260485 NA non-coding downstream 70284 2977680 ~ 2982860 (+)
G260504 NA non-coding downstream 110600 3017996 ~ 3018327 (+)
CI01000062_03904672_03920716 NA other downstream 997115 3903987 ~ 3920753 (+)

Expression


Co-expression Network