CI01000062_02568836_02570636


Basic Information

Item Value
gene id CI01000062_02568836_02570636
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000062
NCBI id null
chromosome length 4496499
location 2568836 ~ 2570874 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000062_02568836_02570636.mRNA
TTTTGACTCAAGTGAAGAAGAATGGGAACCAGAAAGTGAGCCAAGCCCCAAAAAACAACGTCTTCTCTTTCAGTCCCCTACCAGCACACCTTGCACCCCCAGAACCCCCACATCTTTTGTCAGTGGTTCCTTGAGTCCGTGGTCAACTCCAAGAGAAAGGTCTCATTCTCCACGGGTGAGGAAAAGGTCTGCAAGTGGCAAGTCAGCGGAGAGTGACACAGGCACTTGGAATGACATCAGCGTGGAGGATGAGGCTCCAGTGCTACCCCATTTTCTTCCAAAGCGAAACCCAGGAGCTCAGCTCATCATGGACAGAATATATTCCCCCTTGGAGCTATTTCAGCTTTTTTTCCCAACCTCTGTGGTGGACACCATTGTGAAGAACACAAATAGTTATGCAAAAATGAGGTCTGAAGCTGGGAAAAAATTCCCTTGGGTGCCTTTGAAAGCGCAGGAACTGTATTCGTATATTGCGCTTGTTATTTACATGGGGCTTCTCAGCGCAAAAAATATTGTAGACTACTGGTCCAGAAAAGACATTTACAGGTTACCTTTTCCAAAATCCGTGATGTCCAGGGCCAGATTTCATGCCATCTCTTGGAATCTGCATCTTTGCGATCTTAAGGAGGATCGAGTGAATGCACTGAAAAAAGGGACTCCTGAGTATGACAGACTTTTCAAAATCAAGCCCCTTTACACTGACATCGTCGCGGCGTGCAAAACATACTTCCATCCAAACAGACAGCTGGCGGTGGATGAGAGGATGGTGGCGACTAGAGCGAGAACCGGCTTCAAACAGTACATGAAGCACAAGCCTACCAAGTGGGGTTACAAACTCTTCGTTCTTGCTGATTCTGTCTATGGCTACACATGGAACTTCTTCGTTTATGAAGGTAAATCTTCGCTGGCCTCTGGTAAAGGACTGAGTTACGATTCCATGATTCGCCTCCTGGATCTGCCTCTTCTTGGCAAAGGCTACCAGGTGTATATGGACAACTTCTATACAAGCCCAGGCCTTTTATTGGACTTGCTGGATAAAAAGACACTTGCGTGTGGCACGATACGTTCCAACACACAGGGCTTTCCTAGAACAATGTCCAATGACCTCAGCCTCAGAGCTCAAAAGGGATCCATACGCTGGCTTCGGGAAGGTAAGCTCCTCTTTGTGAGGTGGATGGACACGAAAGCGGTTTCAATGTGTTCAACGATACACAAGGCATATGATGGTGCTACCATCTCCAGGCGTATCAGGAATCCCAAGAATGAGTGGGAAATTTGCCAAATCCCAATTCCGGCAGCAGCGAAGGACTACAATAAATATATGGGAGGTGTGGACCTTTCGGATGCTCTAATTGGGTACTACAATGTCCTACACAAAACCAAAAAATGGTACAAGACCTTTTTCTTTCATTTTGTTGATATCGCAGTGGTGAACAGTTTTATTCTCCACCAGCAACTGTCCAAATCTCTGAATAAGAGTGCTCTCACCCAGAAGGACTTTAGAGAGACACTTGTGTCTGAGCTGGTAAAGACTGCCACACTGTTCAGCCCATCACCTGCCCCCAAGCCATCCACATCAGAGCCCTCCACAACTGAGGTCGGCTCAAAGGAAGAGCCATGCTGGCCAGAGTATTTTGGGACAGATGCCTCAAGTGGGAGGAGAATCTGTGTCTTGTGCAAAGTTTCAGGTCTCAAAGTAAAGACACCTGTGTACTGTACAAAATGCAGTGTAGCTTTGTGTTTTGTGTCTTCAAGGAACTGCTTCAGAAAATGGCACGCTGAGAAACATGGGGAAAAATAAGTGCATTGTTGTGTTTTGTCAAAAGACGGTTGATTAAAAGTTGTGCCCTCGCCCCACTGAAGTGCTTTTTTCATTATATAGTAACTTCTTACATTGTAGGCTTTATACACATCTGAGGTTTATAAATGTAAAATGTGTTTTTGAACCGCATTTTTTTTTTTTCCCTATATCCATTCCTTTTTTTTTTTTTTGCATCTTTATTTGATCGGACCAACTAGTTGTATTAGTTTTTTGTAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000062_02568836_02570636.mRNA True 2039 mRNA 0.45 1 2568836 2570874

Neighbor

gene id symbol gene type direction distance location
CI01000062_02479461_02482385 ITGB1BP1 coding upstream 85919 2479461 ~ 2482917 (+)
CI01000062_02454917_02471212 ADAM17A, ADAM17 coding upstream 95503 2454473 ~ 2473333 (+)
CI01000062_02432300_02449658 RNF144AA, RNF144A coding upstream 118637 2432235 ~ 2450199 (+)
CI01000062_02407073_02410074 RSAD2 coding upstream 157472 2407019 ~ 2411364 (+)
CI01000062_02131962_02133023 SOX11B, SOX11, SOX11A coding upstream 435229 2131438 ~ 2133607 (+)
CI01000062_02613774_02651046 MBOAT2, MBOAT2A coding downstream 42900 2613774 ~ 2651554 (+)
CI01000062_02663074_02721051 KIDINS220B, KIDINS220, KIDINS220A coding downstream 92200 2663074 ~ 2722505 (+)
CI01000062_02804022_02857974 NA coding downstream 230288 2801162 ~ 2858027 (+)
CI01000062_02884548_02919912 NA coding downstream 312380 2883254 ~ 2920275 (+)
CI01000062_03059551_03060037 NA coding downstream 488590 3059464 ~ 3060202 (+)
G259932 NA non-coding upstream 84706 2483095 ~ 2484130 (+)
G259987 NA non-coding upstream 175747 2392807 ~ 2393089 (+)
G259985 NA non-coding upstream 177346 2391188 ~ 2391490 (+)
G259984 NA non-coding upstream 177994 2390593 ~ 2390842 (+)
G259983 NA non-coding upstream 179056 2389508 ~ 2389780 (+)
G260054 NA non-coding downstream 291466 2862340 ~ 2880526 (+)
G260094 NA non-coding downstream 319565 2890439 ~ 2891693 (+)
G260399 NA non-coding downstream 333419 2904293 ~ 2904594 (+)
G260401 NA non-coding downstream 336215 2907089 ~ 2907396 (+)
G260414 NA non-coding downstream 345318 2916192 ~ 2916433 (+)
CI01000062_03904672_03920716 NA other downstream 1333637 3903987 ~ 3920753 (+)

Expression


Co-expression Network