CI01000062_03059551_03060037


Basic Information

Item Value
gene id CI01000062_03059551_03060037
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000062
NCBI id null
chromosome length 4496499
location 3059464 ~ 3060202 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000062_03059551_03060037.mRNA
TTATAAAAAGGAACTCATCACAATACCGCAGCTCTTATGACCTGTTAGCTTAAACGGCAAAGAGCTCCACTTAACGCACTGAATAACATGCATTATTCACATGAAGGATGTTTTTTTCCTTGGCCTGGCAGCCTCGGCCCTGCACAGGATGAACCTGTTACTCTGACAGACATGAAACAGCTCGTCCTGAGGAGTGGCAAAGAACTAGAAAATGCGCAAGAGAAAAGCAGATGTCTGGAAAGACATCATGCAGGAGAGAGGAAAGCTGGACAGTCCGACACTTCCATGGCTGTCACTGCAGAGGAGAAACAGACCAGGATCGTTATCTTCCCCAAAGCTCCAGCTCAACATTCCAACACCCAGTGTTTGCGTACCAAAAAAATTCCAGATTCCAGCTCCTAAGAATCGGCCACGTACCACTTAGTACCAGGAGGGAGAGCAATGCTGGAGAGAGAGTGGAAAAGAGACAAACAGAGGGAAAATATGTGGAAACAGCATGGTGTGTAAAGGACAACACCAGCATGCAGGGATGAATCACTTTTGGCCTTTGCAGTGCAGGAACAGAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000062_03059551_03060037.mRNA True 567 mRNA 0.47 2 3059464 3060202

Neighbor

gene id symbol gene type direction distance location
CI01000062_02884548_02919912 NA coding upstream 139189 2883254 ~ 2920275 (+)
CI01000062_02804022_02857974 NA coding upstream 201437 2801162 ~ 2858027 (+)
CI01000062_02663074_02721051 KIDINS220B, KIDINS220, KIDINS220A coding upstream 336959 2663074 ~ 2722505 (+)
CI01000062_02613774_02651046 MBOAT2, MBOAT2A coding upstream 407910 2613774 ~ 2651554 (+)
CI01000062_02568836_02570636 NA coding upstream 488590 2568836 ~ 2570874 (+)
CI01000062_03308286_03311512 DNAL1 coding downstream 248084 3308286 ~ 3312432 (+)
CI01000062_03313225_03326549 NA coding downstream 251992 3312194 ~ 3326725 (+)
CI01000062_03422781_03423731 TMEM121A, TMEM121B, TMEM121 coding downstream 361704 3421906 ~ 3424749 (+)
CI01000062_03480918_03482967 CCDC28A coding downstream 420716 3480918 ~ 3484109 (+)
CI01000062_03487108_03498318 ECT2L coding downstream 426906 3487108 ~ 3498881 (+)
G260510 NA non-coding upstream 28170 3031069 ~ 3031294 (+)
G260486 NA non-coding upstream 32344 3024473 ~ 3027120 (+)
G260508 NA non-coding upstream 35854 3023384 ~ 3023610 (+)
G260504 NA non-coding upstream 41137 3017996 ~ 3018327 (+)
G260485 NA non-coding upstream 76604 2977680 ~ 2982860 (+)
G260526 NA non-coding downstream 6540 3066742 ~ 3067187 (+)
G260572 NA non-coding downstream 99903 3160105 ~ 3161097 (+)
G260581 NA non-coding downstream 125681 3185883 ~ 3186108 (+)
G260582 NA non-coding downstream 126017 3186219 ~ 3186424 (+)
G260592 NA non-coding downstream 147373 3207575 ~ 3207882 (+)
CI01000062_03904672_03920716 NA other downstream 844309 3903987 ~ 3920753 (+)

Expression


Co-expression Network