CI01000242_00025780_00032789 (NAALAD2)


Basic Information

Item Value
gene id CI01000242_00025780_00032789
gene name NAALAD2
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000242
NCBI id null
chromosome length 629286
location 25722 ~ 32789 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000242_00025780_00032789.mRNA
ATGCTGCGCGGTGACTTCGGAGATGAATCAAGCGAGTTGGTGAGTCTTTTTCACTCAAAGGAACCGATTCGCTGCAATGAACTTTTCAACGCAAGCCAACCAAGTCCCGCCTACACACATCTATCTCGTCGTAGTACTAGTTCTCCAACTTTCAACGAGATATGTGCGGCGTTTAGTCAAATGGGAAGTGAGGATAAAATAATCAGCTGGGTCTGCCGGTTAACGGTTATTACAGCTTTCTTCTTGGTTGGCTTTATTATTGATGTCCTGCGCTGCATTCCAGAGATCTTGAATGCCTTTAGGACAGGCTGGTTTGCTCGACCTACTTCTGTCAATCATGGACACGCAACAAAAAGCTTCCTGCGCGACTTTCTGGATGAGATGCGAGCAGAGAATATTAAACATCATCTCAGGAAGTTCACAAGACTGCCACACCTGGCAGGAACGCAGCAGAATCTGGATCTAGCGGAGCGGATTGGAGCGGAGTGGATGGAGTTTGGGCTGGACTCGGTAGAGCTGGTTCCGTACGACGTGTTGCTGTCATACCCAAATGAAACAAGTCCCAACTACATCTCAATAGTGGACCACCTGGGCAATGAGATCTTTAGCACCTCTCTGGCTGAGCCGATCCCTGAGGGTTATGAAGATGTGACCGATATTGTCCCTCCTTACAGTGCTTTCTCTGCAAAAGGTCAACCAGAGGATGAGCTGGTGTATGTTAATTATGGACGGACGGAGGATTTCTTTAAGCTGGAGAGAGAGTTGGGAATAAACTGTACGGGAAAAATTGTCATCGCTAGATACGGCAAAATCTTCCGTGGAAACAAGGTGAAGAATGCGATGTTAGCGGGAGCTAAAGGGGTCGTGCTGTTCTCTGACCCTGCGGATTACTGTGCGGAGGGCGTTGAGCCTTATCCCAAAGGCTGGAACCTGCCAGGAGGAGGAGCTCAGAGAGGGAATGTCCTGAATCTTAATGGGGCGGGAGATCCGCTCACACCTGGCTACCCTGCGAAAGAATACACCTATAGGTCCAGCCTGGAGGACGCAGTGGGGCTTCCCAGGATTCCAGTGCATCCCATTGGCTATCATGATGCAGTTCACCTGCTGCAGCATATGGGAGGGCCTCTTCCGCCGGATAACTGGAAAGGCGCACTTAACGTCTCATACCGACTTGGACCAGGATTCATGGACGGTTTTAATCAGAATAAAGTACGTATGAACATCCACACCAACAATCAGGTGACCCGTATTTACAATGTGATTGGCTGGATCCGAGGAGCCGTGGAGCCAGACAGGTACATCATTCTGGGCGGCCATCGTGACGCGTGGGTGTTCGGAGGGATTGATCCCGTGTCAGGAGCCGCCGTGGTGCACGAGAACGTGAGAGCAGCTGGAAAACTCATGAAGAAAGGTGTGTGTCATCTCACCGTCTAGTTAAATGCTAGTTTAAACAGGACACTTTTTAGGTTCTTAGCTTCTTTTTCTAATTAAA

Function

symbol description
naalad2 Predicted to enable carboxypeptidase activity. Predicted to be located in plasma membrane. Predicted to be integral component of membrane. Is expressed in epidermis; nervous system; otic vesicle; periderm; and pronephros. Orthologous to human NAALAD2 (N-acetylated alpha-linked acidic dipeptidase 2).

GO:

id name namespace
GO:0016021 integral component of membrane cellular_component

KEGG:

id description
K01301 NAALAD; N-acetylated-alpha-linked acidic dipeptidase

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000242_00025780_00032789.mRNA True 1492 mRNA 0.49 11 25722 32789

Neighbor

gene id symbol gene type direction distance location
CI01000242_00037939_00038523 NA coding upstream 4763 37552 ~ 38939 (-)
CI01000242_00054328_00061612 TYR coding upstream 20432 53115 ~ 61966 (-)
CI01000242_00209467_00209713 NA coding upstream 176470 209259 ~ 209713 (-)
CI01000242_00230847_00255610 NA coding upstream 198058 230847 ~ 256208 (-)
CI01000242_00264251_00267773 NA coding upstream 230424 263213 ~ 267773 (-)
G398211 NA non-coding upstream 2009 34798 ~ 35121 (-)
G398229 NA non-coding upstream 9609 42398 ~ 42639 (-)
G398231 NA non-coding upstream 10676 43465 ~ 43974 (-)
G398234 NA non-coding upstream 15485 48274 ~ 48495 (-)
G398236 NA non-coding upstream 18084 50873 ~ 51260 (-)
CI01000242_00300190_00331091 NA other upstream 269136 300147 ~ 331091 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_008780 naalad2 coding NC_007126.7 CM002899.2 43906043 ~ 43942064 (+)