CI01000256_00042139_00049433


Basic Information

Item Value
gene id CI01000256_00042139_00049433
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000256
NCBI id null
chromosome length 242357
location 41383 ~ 50689 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000256_00042139_00049433.mRNA
GAATAAAAGAGCACTGGCACAGGGAAAACAGTGTTAGCCATGTGTTGGAATTGATAGTTCATCTGTTGTTGGTTTTATCAACTAGCTAGTCAAATGTGTTTACAGTTTGCTAGGACTGGGTGATATGATATAAGCTTATTTTTTTTAATGTTGTTTATATATCACGGTATGCAAATCTATCCGTGCAGCTTTTAGTGGGCAGGAGTTATTGACACGTTAGAGCGATAAAGAAACCTGAACGAATGAGTAATAGAGCTGGACACGCTTAATGATAAAATGAGTCTTTAAAGGGGACCAATTCTGCCCCTCTTTACAAGATGTAGTCTCTGGTGTCCCCAGAATGTGTCTGTGAAGTTTCAGCTCAAAATACCCCACAGATCATTTATTATATCATGATGTAAATGGCCATTTTTGAGTGGAAGGAAAAACTGTTTTCATGCTTGTGTGAAAATGAGCTGCTGCTCCCCGCCCACTTTCCAGAAGTTAAAATTTCCGTTAAAATTTTTGCTGTGGTATCTAAACTGGTATTGAGAATTATGAAATTTGACTGTTATCTAAAATTTTGGTATCGTAACAACAACCTTATTTCCAGAAAAAAATCATGATATATATTGTTACTGTGAAAATTACTCATATCTTGATATACAATTTTGGTTATTTGCCCATCCCTACTCCTTCCCACAGTTTTACACATGATTTATTTAGCAGTGTTCACCGCAAGTAATAGGCTGCAGTGTCACCTGGTCAGAAGTAGGAATGGCGCACAGACGAAAAGCAGTCTTTTTGAACAGCTGGTGGTACAGAGGATACCATCCCGTCAAGATAGGGGACCTTTTCAACGGCAGATACCATGTGATCCGGAAGCTGGGCTGGGGTCACTTCTCCACCGTCTGGCTGTGCTGGGATATTCAAGCAAAGCGTTTTGTTGCAATGAAGGTCGTGAAGAGCGCACAGCACTACACAGAGACGGCACTGGATGAAATTAAATTACTCCGATGTGTGCGTGAGACGGATCCTGATGATCCTAATAAGGACATGGTTGTTCAACTCATAGACGACTTCAAGATCTCAGGGGTGAACGGGATTCGTATCCTCACAGTCTATGTGTGTATGGTGTTTGAAGTTCTCGGTCATCATTTGCTCAAGTGGATCATCAAGTCTAATTATCAGGGTTTGCCGTTACCCTGCGTCAAGAGCATCATTAGACAGGTTCTGCAGGGGCTGGATTACCTTCACAGCAAGTGTAAGATCATCCACACAGACATCAAGCCGGAGAACATCCTCATGTGTGTGGATGACGCCTTCGTGCGCAGGATGGCGGTCGAGGCCACAGAGTGGCAGAAAGCAGGAGCGCCGCCGCCGTCAGGATCCGCTGTCAGCACGGCTCCTCAACTCAAACAGGTGGGGAAGATCTCCAAAAACAAAAAGAAGAAGCTGAAGAAGAAGCAGAAGCGGCAGGCGGAGCTTCTGGAGAGACGTATGCTGGAGATCGAAGCTCTGGAGCGAGAGGCGGAGAAACAGAGAGCGGGCGGAGCCTCAAACTCCGCCCACAGCCCCACCCTGGTGCTGGTGGACAGTGCAGAACCGGATCAGGATCAGCAGGACATTGAGGAGAATGAGGAAGATGGTGACGTCCTGTCCGCTCCCGACTGTCCCACTGAAGAAGAGTCACACACACGCACACACACTCCACCCGGACAGCAGGAGGAGCAGGAAAACTCAGGAGAACATGAAGAGCAGGATGGAAATGAAGATGAGCATCTGTCGCCGCCAGATCCCAGCGTGCCGCAGTCCTCACCGCTCCTCTGCCCTCTGGTGGAATCGGAGATCAGCACGACCGACCGCGACGCTTCCGACGCCTCCTACGAACTTTACAATGGAGAAATGGCCGGACTCACCAACGGAGCGCGGCACCGCGGCACCACACCGCGCTTCCCCGAGCTGCCGCTGGATCCCGCCCCGCCCGACGGCGTGCCAGACGAGGCCCAGGCTCTCAGCACAAACAGCGACCGCAGCCGAACGGTGTCGTCGTCCAGCACCGGAGACACGCCCAAAGCGACGAGGCTCCGAGCGGCTGATCTACTGGTGAATCCTCTGGATCCGCGGAACGCAGAAGTTCTGAGAGTCAAAATCGCTGATCTGGGAAATGCATGCTGGGTGCACAAACACTTCACTGAGGACATCCAGACGCGGCAGTACCGCTCTATCGAGGTTCTGATCGGCGCGGGATACAGCACTCCGGCCGACATATGGAGCACAGCCTGCATGGCGTTCGAGTTGGCCACCGGCGACTATCTGTTTGAGCCGCACTCGGGGGAAGACTACTCTCGTGATGAAGGTGAGCTGCGGCACATCACGAAGCTCAAGCCCTGGTCTCTGTTCGACGTGCTGGTGGAAAAATACGGCTGGTCGGCCGAGGATGCTGGTCACTTCACACACTTCCTGTTGCCCATGCTGGAGATGGTGCCAGAGAAACGAGCCTCCGCTTCAGAATGCCTCAACCACCCCTGGCTGAACTCGTAGCACTTTTGTCCTTCAGACTCATTGACGCCCCCCTGCGGCCCTGTCCTGAACTGCAGCCCACCGTCATTAGAGAGGAAGAACCAGAGACGAGGGGCTTCAGAGAGACGAGGGTGGGCTTCAACACACACACACACACACACACACGCGCGGGAGAAACAAGCCTGTCTTTACCTGGAGCTTCATTCACCGTCTTCCTCGACCTCATTCAACAGAATTTTACAGACTGAACACAGAAAGTGAGATCATTTCACATTATCTGACAGATAAAAAAAACTTTTATGTGATTCATTCTCATGACATTTTAAGGTGTTTAATTTTAAGAAACGGGACAGGGTTTTGGTAAGGTTTAAAACTTGTAGAACTCAGTTTCTTCTTGAGGCCTTCAGTTAAACTCTTGTGAATGTCCTAGAAAAGCAAACATTCATACAGATGAATTAATTGACAGATTAATATATGTGAGCAGTCAGTAACGGTTCGTCTCAGTGACTGAATTTGAGAGTTACTGTCACAGCAGTGAATGTGTGTGTGTGTGAGTAACACAGACTGCTAGTTGATGTTTCTGACATTCAGGAAGCCCACCTGAGATGCTCTGCATGAAGCCCCGCCTCCTTTCGCCCCACTGTCCAATCAGGTTCTGCAACGGAGCTGTTTACAAACCTCACAGACACACACACACACACACAGACACACACACTGCCTCTGGAAAACATGAATCCAGAAAGAGATGCTTTGGTTTGCGGAGAGACGGATGGATGGACATTTCTGCGTTGAGTTCCTCGACTGGTTTTATGTTTTTATTCAGAGTTTTAAATCTCCCAGTTCCAACGACAACATTCCTGATTCTACAGCGGTGCATCTGCTGCACTTATGACTTTCTGCACTTTCTCTGGCAGGACGGGCGTCCCGTTTTAATGAGGCCGCACTTGTGTTTGTACGTTTTGTTCAGGGAATCTTACTGATGTACAGAGATCCAGCAAACTGTCCAAAAACTCGCAACTGCTTGAGCGCAAGATAAACACACAACGCTGTTAGGAGACACGCATCACGGTGGCGGTCGTCATGGAGACGAGCATTATGGTGGCGGTCGTCATGGAGACGAGCATCATGGCGGCTGTTGTCATGGAGACGAGCATCATGGCGGCTGTTGTCATGGAGACAAGCATCATGGCTTCGGCCGTCATGGAGACGAGCCTGACGCTGCTCTAAATACATCATCATCATCATCACCACAGTTAGTCCAGTTGCCTATTTTCGCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000256_00042139_00049433.mRNA True 3779 mRNA 0.49 14 41383 50689

Neighbor

gene id symbol gene type direction distance location
CI01000256_00072914_00083834 NA coding downstream 21226 71915 ~ 83974 (+)
CI01000256_00084647_00096001 AQP9A coding downstream 33900 84589 ~ 96001 (+)
CI01000256_00119208_00121266 NA coding downstream 68126 118658 ~ 121375 (+)
CI01000256_00188080_00194733 NA coding downstream 136794 187483 ~ 195611 (+)
G400290 NA non-coding upstream 20196 19530 ~ 21187 (+)
G400281 NA non-coding downstream 6618 57307 ~ 60168 (+)
G400313 NA non-coding downstream 101292 151981 ~ 152629 (+)
G400317 NA non-coding downstream 132951 183640 ~ 184811 (+)
G400326 NA non-coding downstream 147844 198533 ~ 204038 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_024355 CABZ01113818.1 coding NC_007136.7 CM002909.2 222921 ~ 225964 (-)
bowfin (Amia calva) AMCG00013843 NA coding CM030125.1 CM030125.1 45359187 ~ 45373711 (-)