CI01000299_05974659_05985294


Basic Information

Item Value
gene id CI01000299_05974659_05985294
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000299
NCBI id null
chromosome length 6567443
location 5974391 ~ 5985606 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000299_05974659_05985294.mRNA
ATTTCCTGCTGGTAACTTACTGGAGTCGAACCAGCAACCGACTCTCTAACCAACAGCCCCAAGAATTTTGTAATTATTGGTATTAGATGATTTGTTAATTGCATTCAATAGCATTCAATATAACATCTGCAGCTGCATGTTAAGTTTTTGCTGTAGAGACCAGTTTCTAGCGTTTCGGAACAGTGAATCATTCTGCGAAGCAATTGATTCAAAGCATAGGTTCAAAGCTTCGGAAAGCTGTTTCTCCTTAGAGCCCTGCACAGGCCTCAAATTTAGGCCCTGGCCCTAAACGCTCAGACCCGAGCCCAGCCCATGTCCGACATCTTGTCAGAATTCTCGGCCCAAGCCCGACTGGAGCACTTCAGTCGTATCAGGAGATATTTGATAGACTATAACATTTCTACTGAGTTTGTTTCAGAAATATTTGAAACTGTTCTGGTGTTCAAATTGCTGAAGAAAATGATTCACCCGATTTTCTTCCATATGTGCCTGTGGTGTGTAGTTGGAGTTTTTAGTGTTGATGCAGTGACGCCAGTGTCAGTGACGGAGGGAGATTCAGTCACTCTGAACGTACAGAGAGATGATGAGATCGAATGGAGGTTTGGAGATACAAACATTCTCATAGCTGAAATCAGAAAGGACAATAAAATCGCGTGTTATGATGATAGTGCCAATGGGAGATTCAAAGGCAGACTGAAGATGGATCAGAATGGATCTCTGACCATCACAAACACCAGAATCACAGACTCTGGACTTTATAAAACAAGAAACACGAACACCCTGCTGAACACATTCAGTGTTACTGTCTATTCTCGTGTTCCGGTTCCTGTCATCACCAGAGACTCTCCACAGTGTTCATCATCATCATCATCAGAAAGGTCTTCTTCATGTTTACTGTTGTGTTCAGTGTTGAATGTGAGTCATGTGACTCTCTCCTGGTACAAAGGAAGCAGTTTATTGTCCAGCATCAGCGTGTCTGATCTCAGCGTCAGTCTCTCTCTACCTCTGGAGGTGGAACATCAGGATAAAAACACCTACAGATGTGTGCTGAACAATCCCATCAGCAACCAGACCAAACATCTGGATATCGGTCGACTTTGTTCTGAATGTTGCTGTTGTGGTTTCACTGAAGCTGCGATCCGATTGGCTCTCTCTGCTGTGGTGGGCGTGGCCGGGGTGGTCGTCCTGGTTTATGAATTCAGAACCAGAAAACTTCAACAGAAGAAGAGCGTGAAGAACGCAGCAACAAACACTGATCAACCAGATGAAGTTGCCTCTGAATGATTCCAGCATTATATCACAAGTAAATGTCATTTCCATGATTATTTCATTTTTATTATCATAAGGTTGATATGTCACGTCTTTAACACCCTTTGCATCTTATTACCTAATGTTAAATGTTCATAAATATCTCTGTTGATACAGTGACCCTGCTGAAGCTCCACCTAGTGTTTTTTTTTTCACTAACATCTCTTGCTGTAATATTTGATAGTATAAAACTTAATATTGCTTTTATTACTTTATGCCTCTTTGTTTTATAATATTAAATAAA

Function

NR:

description
hypothetical protein cypCar_00035111

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000299_05974659_05985294.mRNA True 1552 mRNA 0.41 5 5974391 5985606

Neighbor

gene id symbol gene type direction distance location
CI01000299_05946615_05949088 NA coding downstream 25157 5946333 ~ 5949234 (-)
CI01000299_05927821_05933216 BLZF1 coding downstream 39559 5927314 ~ 5934832 (-)
CI01000299_05919510_05924061 TXNL4B, TXNL4B.S coding downstream 49763 5919128 ~ 5924628 (-)
CI01000299_05896205_05898855 NA coding downstream 75534 5896043 ~ 5898857 (-)
CI01000299_05856747_05860959 NA coding downstream 111405 5856716 ~ 5862986 (-)
CI01000299_06037407_06054548 TPP2 coding upstream 50611 6036217 ~ 6054548 (-)
CI01000299_06130943_06144384 NA coding upstream 143467 6129073 ~ 6144868 (-)
CI01000299_06145156_06154533 NA coding upstream 159349 6144955 ~ 6154533 (-)
CI01000299_06185794_06195015 GRK1A, GRK1 coding upstream 199882 6185488 ~ 6195015 (-)
CI01000299_06197276_06199730 TFDP1 coding upstream 211000 6196606 ~ 6199730 (-)
G407825 NA non-coding downstream 4835 5963680 ~ 5969556 (-)
G407827 NA non-coding downstream 28366 5945375 ~ 5946025 (-)
G407858 NA non-coding downstream 43845 5929639 ~ 5930546 (-)
G407848 NA non-coding downstream 198850 5774249 ~ 5775541 (-)
G407881 NA non-coding upstream 32936 6018542 ~ 6023664 (-)
G407884 NA non-coding upstream 39419 6025025 ~ 6025802 (-)
G407885 NA non-coding upstream 40509 6026115 ~ 6026325 (-)
G407810 NA non-coding upstream 44670 6030276 ~ 6030985 (-)
G407829 NA non-coding upstream 101558 6087164 ~ 6088221 (-)
G407805 NA other downstream 138402 5835889 ~ 5835989 (-)
CI01000299_05428160_05443433 APP, APPA other downstream 518283 5427661 ~ 5443433 (-)
CI01000299_04913779_04927715 NA other downstream 1045573 4913373 ~ 4927715 (-)
G407413 NA other downstream 1423670 4475994 ~ 4550721 (-)
CI01000299_06526127_06532048 CEP97 other upstream 546395 6526127 ~ 6532048 (-)

Expression


Co-expression Network