CI01000299_06130943_06144384


Basic Information

Item Value
gene id CI01000299_06130943_06144384
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000299
NCBI id null
chromosome length 6567443
location 6129073 ~ 6144868 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000299_06130943_06144384.mRNA
AGTATTGTTGTTTCAGAAGGATTGAATGTTTATGGTTTTATTCATGTATGTATCTGCTAAACCAGGGGTTTTCAAACTAGTTAAGAGAAAAAGAGTAAAAAATAATAAGAATATAATTTAACTAAATACATTTGATTTTAAATGTTATCAGGCCAGTCTCGTCAGGACAACATTCAAAGTTTGTCATGAACTTTACTTTGCAGGTTGTCTTTAAGCTCTAGATTCCTTTATTTCCAGTAAAACAGATTCTCCTGAACTCCGTCTGGTTTTGTCGCGTCGCGGTGTGTGTGCGCGCGCGCGCTCCTCCGCTCATGCGTCACCATCAGCTCAGGCGCGTGAGTTTTTGTTGTCAGTCCCGCGCGCTTCACTTTACCTGAGAGGAGCGGCGCGTGTTCACTTACCGCGAGGATTTGTTACAAATACTGAGGAAAATATAAACTTTATTTTGTGGATAGAATTCTGTGTGTGTGTAACATCAGACGCGATGCAGCAGCAGCCGAACGCGGATCCTGCAGATGTGTTTGTGAAGCGGCGGCGGACGGCTCTCTGGTGTTCAGTGTCTCTGTTTGGACTCTCAGTTCTGATTCTGGTGGTCGGGCTGCTGTCAGCCACGCAGACGGATAATGTGGCCGTGTCTGGATACTATCCCGGGATTATACTGAGTTTTGGAGCATTCTTGGGCGTTGTTGGTCTGAACCTGGTGGAGAATCGCCGACCGATGGGAACACAAGGCACATCCGCTGTCAGATCGATGAGCGCGATTGGACACGTGGTCAGTAATGCTGAACGTGATTGGCTGACATGTCAGCTGAATCGGTGTTCGTGTGTGTTTGAATCAGTGAGATCTGTCGCATTTCTCTTCATCTTCAGCTCAAACGCTCTTCTATGTCATAATCTTCCAGCAGATGCTCTCGTCCCCTTCAAATACAAGATCACTACAACATCTGCCCTTGAACGTTTACAAGTGCTTCTGGTGGCGTCCATCATCTTCATCAGTCTGGGAGTCGTGTCATGTTTCCTCTGCTCCATCATCGACGGCATCATCGCGGCAGAGTTCATCGAAAGGAGGCCACTGATGGAGGGCCGCTGTGAGTTTTACTCCAGCTCATCTTCTTACTCCTATGACAGCTACTACACTGAGGTTCACTGTAATCAGTGTAAAATGAAGGTGAAGAGCAACACCTGCTACTGCTGCGACTTATTCCACTGCGACAGTCTGGACTATCAAGTGCAGTACTACGAGTTCACGGGCGTCAGCAGCTGCTGGGACGTGGTGAATCTGTACCGTCTGCTGTGGGCCGGTGTGATGCTCAACGTGCTCGGAGTGTTTCTGGGCATCATCACCGCCGCCTTACTGGGAGCCTTCAAAGACCTGCATCTGAACGGTTACCCAGCTCCATCCGCAGGTCCGTCCGTCCCCGAGGTCTCGGCCTCCCCGTCCGATGAGACTCAGCCGGCCGCTCAGAGCGGGACGAACCCAGGCCCACCGACTCAAACCTCATCTCAGGACACCAGCGGATACATGCTGACTCCAAACGCTCCCTCGCTCTACGCTCACTCCTTAGGGCCCTTTGAGAAGCCTCCGCCCTACGCCTGCTGAAACACCCAAACCAGGAACACTGACCTCTGACGGGACGCCTGACCCGTGAACGTGAAGATCTGTGTGACCGTCGCCGCTAATGACCTCTGTAATCGTCAGTGTTTCTCGTAGCAAATGTGATCGATGTTGTTCTTCAGTAGTTTACCTCTGAACTTTAATGTTTAACTCCCTGTTCCTGTGGTCGGATCTTCATTGTTTGATTCACCGAATCACAACACAAACGCTTCCGGCTGCACAAGCTATTGTGTTGTGAAATGTGTCCGACTCTAGTCATAACACAAGAGTACAACACAATGCTTTAGTCTTCTTCTGCGGGCAGATCAACTAGTCATGAGTTTGAAGAGAATCTGACTGAGAGTTAGTGTCATGTTTATATCAGATTCCTGAATAACACGTATGGTTTAATAACAGGTTCCATTAGTTAACATGAACTAACAACAGTTGCTGAACAGTTGCATTTTTATTAACTAATGTTAAAGATTAACTCTTTCCCCGCCATTGACAAGTTTTTCCGGGAATCCATGCTTTGACTGTTATACGGTAGGGGGCACTATTACACATCTCTGGATCAAAACACAGGTGAAGAAGCAGCAGAAACAAGCGATACAAGCACTGCTGACGCACATAAATAACACGATCATCAAACCTTCAACAGAATAGAAATCAAAACTGTCTAACGTTACTGAATGAAATGTCGAACCCATGAAGAGGAAACGACCGTAAAGCTTTGAGGTGTTGATGGACTCTATCTACTCCATCTGTGTTTTGATCATACGGACAAAAACATGATTTTCTCAGCTTTTTATTCAAAATGTAACTTTTTTTTTTTATGAAACGTACCCACATTCAAGTGATAAAAAAGAATGCATGAAGCTAGAATAAAATGTTTTTGTTGTTTAAAAGCAGAGGATCTGTTCTTTCTTTTGATAATGTTCAGATATTTATACAACAAAATATTCTGGGGGCATGAAAGTTTTGTGAAAATCATCAAAAATGCTGCTGCTGGCTGGCTACTTTTTAAAAACTGTCAGGAGGGGAAAGAGTTAATAAATACTGTAATGCATTAACTAATGGGACTTTATTGTAAAGTGTTACCTCATGTTTTCTAACAAGATTAAGAATATTCTGTTTTCACAAAAGTATGAATGTTCTTATGTTTTTTCTCATGTCCAAAGGCTAAACTGTAGAATTATTTGCTGAATGTTCTCAAAGTTAGGATAACCACCAATTTGTCTTAAAGCCCATGAATTTATTTGGTATTTTCAAATAATAAACATTGCTGCTGCTATGACTATTACTTTTAGATTTTATTTTCATAATGTAGTTATTGTCATTAACACCTCCTCACACACTAAAAAATGAGCATGTGTTTGCTACTTAAAGAGTTAATAGATGGACAAATATATGGTTAGGATTCACTAATGTGAAGTTTTAAATGTTGTACAAGACAAAACGACGCTATAATGTACAATCAGACATCAAAGCCTGTCATTTTATTCTCAAGATGTTCTTAACCCGTTCTGCAAGTTATCAGTGTGAATTAAAGACTTTTTAAGAAAATTTCAGCTAAATCATGAGCTTTTCTTTGGTTTATAGGTTCATTTGTTCTTGAACATTACAGAATTACCTTCAGTTCAGTGTTCTGTCATTATTTTTTATTGCTAAATTCATTCTAGTATTTTATTCACATCCATTTTGTGATGGAGATTGTGTCTGAAAATATGATCAACCAAAGTCCCCTAGATTTAAAAATGTCTCTATAAAGAATGAACAGTTTTTCCACGTGATTTTGTTTTCAGAATTTTCAGCATTGTCATGTTTTCTGTCCAGTCTGCAACACAACCAAAACAACCACTTTTTACCTAATAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000299_06130943_06144384.mRNA True 3470 mRNA 0.42 10 6129073 6144868

Neighbor

gene id symbol gene type direction distance location
CI01000299_06037407_06054548 TPP2 coding downstream 74525 6036217 ~ 6054548 (-)
CI01000299_05974659_05985294 NA coding downstream 143467 5974391 ~ 5985606 (-)
CI01000299_05946615_05949088 NA coding downstream 179839 5946333 ~ 5949234 (-)
CI01000299_05927821_05933216 BLZF1 coding downstream 194241 5927314 ~ 5934832 (-)
CI01000299_05919510_05924061 TXNL4B, TXNL4B.S coding downstream 204445 5919128 ~ 5924628 (-)
CI01000299_06145156_06154533 NA coding upstream 87 6144955 ~ 6154533 (-)
CI01000299_06185794_06195015 GRK1A, GRK1 coding upstream 40620 6185488 ~ 6195015 (-)
CI01000299_06197276_06199730 TFDP1 coding upstream 51738 6196606 ~ 6199730 (-)
CI01000299_06208641_06214104 TMCO3 coding upstream 63744 6208612 ~ 6214104 (-)
CI01000299_06242885_06246604 LAMP1 coding upstream 97128 6241996 ~ 6246604 (-)
G407895 NA non-coding downstream 14583 6108478 ~ 6114490 (-)
G407912 NA non-coding downstream 21820 6099848 ~ 6107253 (-)
G407909 NA non-coding downstream 29615 6093291 ~ 6099458 (-)
G407949 NA non-coding downstream 37192 6091491 ~ 6091881 (-)
G407967 NA non-coding downstream 40347 6088502 ~ 6088726 (-)
G407971 NA non-coding upstream 629 6145497 ~ 6145924 (-)
G407975 NA non-coding upstream 38267 6183135 ~ 6183535 (-)
G407923 NA non-coding upstream 75898 6220766 ~ 6222379 (-)
G407939 NA non-coding upstream 81544 6226412 ~ 6232275 (-)
G407986 NA non-coding upstream 244508 6389376 ~ 6389644 (-)
G407805 NA other downstream 293084 5835889 ~ 5835989 (-)
CI01000299_05428160_05443433 APP, APPA other downstream 672965 5427661 ~ 5443433 (-)
CI01000299_04913779_04927715 NA other downstream 1200255 4913373 ~ 4927715 (-)
G407413 NA other downstream 1578352 4475994 ~ 4550721 (-)
CI01000299_06526127_06532048 CEP97 other upstream 387133 6526127 ~ 6532048 (-)

Expression


Co-expression Network