CI01000299_06145156_06154533


Basic Information

Item Value
gene id CI01000299_06145156_06154533
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000299
NCBI id null
chromosome length 6567443
location 6144955 ~ 6154533 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000299_06145156_06154533.mRNA
ATGAAGGCGGCTGAAGCTAACATCAGCGCTCTGACTGAAGAGAGAGACCGGCTGCTGGAGTCGCTGCAGGCCGTCAGAGACCAGAGAGAGCAGCTGGAGAAGAGCGAGATGATGGTGCTGTTGAGGCAGGAGCTGCTTTCTGCTTGTGCTGAGAGAGACCGTCTGCTGGCAGAGAGAGCGAGAGATGCTGCATGTAACCAATCCAGCGCTTCCACCAGTATGACATCACTGACTGAGGGAGGAGACCTTCAGGAGATCCTGCAGGGCGTCAGAGAGCTGATCCAGGTCCAAGGAGAGCTCAAACAGAAGAAGCATCAGGTGTCAGATCAGCTGAGTCCCACAGAGAAGCAGAAAGTTCAGCTTGAGCAGATTCAAGCTCTCAGGGAGGAGCTGGAGTCTCTGAGGAGTCAGAGGGAGGTGCTCCGGAAAGACCTTCAGGAGGCAGCAGCGATTTCTAAAATGTATCAGGACTTACTGCATGTGACTAAGGAGGAACTGAAGCAGCAGCAGAAAGAGAAGGAAGACCTGATGGAGCAGAGTGCAGAGAAAGAGTCCCAGCTTCAGCGGCGATTGAGTCAAATGAGTGAAGATCTCTCGGCCGTACAAGACCAGCACAACACAGAGATCCAAAACCTCCAGACAAACCTCACCTCGCTTACGGAAGAGAAGGATGAGCTCCTGGAGACACTGAGGAGAACGAGAGAGGAGGGAGACCTACTGAGACAGGATCTTCAGAAGAGTGAGCAGACGAGAAACCGGCTGACCGAGGAGCTCGAGTCTCTCACTGGTGTGACCGATCAGCTGGAGAATGAGAAGACTTGTGCTGAGCAGGTCCTCGAGTCTTTAAGAGACGTCACAAAAGAGAGGGATCAACTCAGACGAGAGCTGGAGGGAAAGCTGGAGAAGCTGACACACATTGAGTCAAAAGCAGAGAAGCTGGAGAAACAGAAGATCCTGCTGGAATCTGAAGTCCATTCTCTCAGTCAGTCTCTCACTGAGGTGAACTGTAGCGTGTCTTCTGATCAGCTCAAACACAGATCTGCACATCTGATTTCTGAGATTGATGCATCTGATGGGAAGCTGCAGGCGGCGTTTGCGAAGCTACAGCTAATCATCGATCGTCCCACTGACGCTTTATCTGAGGTGAATCGTGAAGAATGGACTGTGATCTATCAGCTGCTGCAGTTCATTCCTTTGGCTCAGAGGAGCGTCCACGCGACACACACCACTAAAACCACCAGACTGAATCACGTGCTGATCAAGACTGCGGAGGCGTACAGGAGACTAGCGCAGCGCTGCAAGACACACTTCGAGACGGAGGTGCAGCGTGACATGGCTTCGTTTGAGGAGTCTCGACTCCAGGACCTGCTCGTCCTCATGACTCAGGATCCGTCACGGGCTCTCCGATCTCTTCAGGATGACTTCCAGCAGGTCTGGGATCAGAGACTGTCACGTCTGGTGGAAAGACGTCAACAGTACCTGCAGAAATTGGAGAGCATTCTAAGGGTTCTGGAGGGCGGTTTAGCCAAACACGCAGTGATGATGTCAGAGGAGTGTCAGCACAGGACTCGTGAGCTCGAGGATCTCAAGGCTCTGCTAAGATCTCCTCAGACGGCCGCTATTGTACATCTGCACGAGCAACAAATCGCTCGTCGCACTAAAGCGACCGAGCATCTGAACACACATTATGTTGCTCTGCTGAACGAATGTGAGTCTGAGAGCTCCCCGCTCAGATCAGCATCTTCTGAGTCTGAGCGGCGGCTGGAGGATCTGAGAAGAGAGACTGTAACTCTGCTGCAAGCGCAAAACGGCACCCTGCCCAAAACTGAGGCGGAGCTTCTGCGGGACAATCAACATCTGTCACTGCAGCTGCAGCAGACGCAGAAGCAGATGGAGGAGATTCAGGATCAGATGAAGGAACTGAAGGTTCAGTCTGATTCCTTGAACCAGAAACATCTTCAACTCCAGGAACTCGGTGCCCAGCTGAAGCAGAAGGAAGCTCTCATCCAGAAGTTAGAAGCCAAACTTAAAGAGTCAGAGGTCCTGTCTAAGAGGAACATGACACCAGCTGCCGCTGAACTCGCCGCCCTGAAGGACAAACTCGTCAAAATGGAGCTGGATCACATCGCAGTCACCACAAGTCATGAGAAAGAAATCGCACAGATGAGCTCCATGTTGGAGCACAGAGCCGACGTCATTCGCAAGCTGAAAGAGACCCTGAGGAAAATGCAGCAGGACGATGAACAGTCCTTCGCAGACGGTGAGGAGTTTGACCTTAAATTGAGCTCAAACAGACCAGTCACATCAACTCAAGACAAGAAGATGGAGGAGTTGCAGAAGAAGAACGCTCAGTTTGAGAGTCTGCTGAGCAAACAACAAGAGGAGATCAACAAATGGAAGCGGCGAGCGTACAGGATTAAGGAGAGCAGGAAAGACGCTCTATCTACTCCAACCAAACGCCAGCCTCCTCTGACGGAGACTGAAGTCAACTCGCCCAAGAAGGCCTTCCTGGACTCTCCCAAGAGCAAGTTCTTTGACGTGCGCTCCAGTGTTCCCATCTCCCTCAACCATCCCACGCAGTTCTTCGACAACTCCAGCCTCGGGACGGTTCCAGATTCCAGCGCAGCCGTCGCATCCAGTGCCGCACCGCTTGACGACTGGTGGAAGATTTCTGACGCTTCGCCCACAAAACACGATGCTAGCATCAATGCTAACGCGTGCCCAACGCAGTGATCTGCCCTCATGCCGTGGAAGTTGCCGTGTTGGAAAGTTCTGAAGTCATGCATTGAAATGCATTTTATGATGCACAAACTAATGTTCACAGATCTTCACAGCTGGAGCTTCAGTGAGCACTAAGATTGTTCTTTTACAAGTCTAGATTTTTCTTTCATGTATGTTTGCCTTTTTAATGTTGTGGTGTTTTATGTAAATAAA

Function

NR:

description
Zgc:152925

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000299_06145156_06154533.mRNA True 2934 mRNA 0.51 19 6144955 6154533

Neighbor

gene id symbol gene type direction distance location
CI01000299_06130943_06144384 NA coding downstream 87 6129073 ~ 6144868 (-)
CI01000299_06037407_06054548 TPP2 coding downstream 90407 6036217 ~ 6054548 (-)
CI01000299_05974659_05985294 NA coding downstream 159349 5974391 ~ 5985606 (-)
CI01000299_05946615_05949088 NA coding downstream 195721 5946333 ~ 5949234 (-)
CI01000299_05927821_05933216 BLZF1 coding downstream 210123 5927314 ~ 5934832 (-)
CI01000299_06185794_06195015 GRK1A, GRK1 coding upstream 30955 6185488 ~ 6195015 (-)
CI01000299_06197276_06199730 TFDP1 coding upstream 42073 6196606 ~ 6199730 (-)
CI01000299_06208641_06214104 TMCO3 coding upstream 54079 6208612 ~ 6214104 (-)
CI01000299_06242885_06246604 LAMP1 coding upstream 87463 6241996 ~ 6246604 (-)
CI01000299_06257032_06266210 CUL4A coding upstream 101324 6255857 ~ 6266210 (-)
G407895 NA non-coding downstream 30465 6108478 ~ 6114490 (-)
G407912 NA non-coding downstream 37702 6099848 ~ 6107253 (-)
G407909 NA non-coding downstream 45497 6093291 ~ 6099458 (-)
G407949 NA non-coding downstream 53074 6091491 ~ 6091881 (-)
G407967 NA non-coding downstream 56229 6088502 ~ 6088726 (-)
G407975 NA non-coding upstream 28602 6183135 ~ 6183535 (-)
G407923 NA non-coding upstream 66233 6220766 ~ 6222379 (-)
G407939 NA non-coding upstream 71879 6226412 ~ 6232275 (-)
G407986 NA non-coding upstream 234843 6389376 ~ 6389644 (-)
G407927 NA non-coding upstream 237511 6392044 ~ 6392356 (-)
G407805 NA other downstream 308966 5835889 ~ 5835989 (-)
CI01000299_05428160_05443433 APP, APPA other downstream 688847 5427661 ~ 5443433 (-)
CI01000299_04913779_04927715 NA other downstream 1216137 4913373 ~ 4927715 (-)
G407413 NA other downstream 1594234 4475994 ~ 4550721 (-)
CI01000299_06526127_06532048 CEP97 other upstream 377468 6526127 ~ 6532048 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location