CI01000299_06299968_06305021


Basic Information

Item Value
gene id CI01000299_06299968_06305021
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000299
NCBI id null
chromosome length 6567443
location 6298896 ~ 6305158 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000299_06299968_06305021.mRNA
ACATCATTACTGACTGCATCAGTGGCTCCACCTGCTGGTGACACACAGAACAGCTTCAGTCACAGGATTGTGCAATGATCTTCTGTCCGACGCCTACGAGTGTCCAGACCAGACTTTGATCCTGAAGCTAAAACATCATGGAGTTCAAGCTGAACAGAATGAAGCTCTGCCACATGATCCTGATGCTGCTCGCCGTCCCAGAGTGCTTTGGGCTTCAGTCAGTGTTCCTCAGTAAGTCTGAGGCCAGCCGGCCGTTATCTCATCGTGTCAGGCGGGCCAACTACTTCCTGGAGGAGCTGAAGCTGGGAGATCTGGAGCGAGAGTGTCTGGAGGAGATCTGCTCGTATGAGGAGGCCAGAGAGATCTTCACCATCCCCAAACAACTGGAGGAATTCTGGAAGAGATACACAGCGGTGGATTTCTGTCAGTCGGGACCGTGTCAGAACGGAGCCACATGTGTGGATCAGATGGACACCTACATCTGCATCTGTCCAGTGAACTTCGAGGGGCGACACTGTGACAAAGAAATATTACCACACAGTTCCTACGGATGTCTGTACAGGAACGGCAACTGCGAACACTTCTGTGTGGAGATCACCAATTCGACTCATCGCTGTGATTGTGCTCCCGGATACACACTGCACACAGACAACAGCAGCTGTGTGCCGCAGGGTGGTTTCCCGTGTGGCAGGCTGGTGGAGAAGGGTGTGGGTCCGAGGATAGTGAAGGGCGACGTGTGTCCTAAAGGACAGTGTCCGTGGCAGGCTTTACTCAAGTATGCTGGAGTGTATAAATGCGGTGGTGTTATTCTAAATTTCCAATGGATTCTCACCGCGGCTCATTGTGTCTGGAATAAAGATCCATCCCTCTTACAAGTGACAGTCGGTGAACACATCCTCGATAAAGACGAAGGAACAGAGCAGATGAGGGAAGTGTCTAAAGTGTTCATCCACCCGCGGTACAACCACTCCAGCACGGACAGTGACATCGCACTGCTGCGTCTCCTCAGCCCCGTCACGCTCGACCGCTTCGCCATTCCCGCCTGCCTTCCTCCTGCTAACGGCACGTTCGGACGCACCATAGGAGCCATCCGCATGTCCACTGTCAGCGGGTGGGGTCGCATGGCGCAGTCGGGACCGCCGTCTCTGGTTCTCCAGAAGCTGGAGGTGCCGAGGGTCTCCTTAGAGGAGTGTCGGGAGAACTCGGGTCTGAAGGTGACCAGGAACATGCTGTGCGCCGGCTTCATCGAGGGCGGCCGTGACTCCTGTCAGGGGGACAGCGGAGGGCCGCTGGTCACCCGCTACAGAAACACATGGTTTCTGACAGGAATCGTGAGCTGGGGGAAAGGCTGCGCACGCGCCAACGTCTACGGCATCTACACGCGGGTGTCCGTCTTTGTGGAGTGGATTCTGAAGACTATGGCCAGCGTATGAATACAAGAGTTTCTGAATGTTATGTAAGGTGAAGTGTGTTCAGATTTTCACAGTCACTGAAGTCAGTCATGAGCTATGTTTCCATTGACCAGTTTTTATGTGAATTTTGGGATATTGCATGTAAAATTGTTGGATGGAAACGCCAAGATGCACATGAATTCTAAAAAAAGTACGAGCTCAATTGAGGCAGATCATTTTTTTAATCCGATAAGAAGACATGCACATAAATTACGATAGTTTTATAGAATAAATCCCTCAATGCACAACAAAAATTCATGGTGCAAAATATAAAACTCTAAACTGGCTTTTTTTCCCGCATCATAAATGAGTTTGTCTCAGAGCGTCAGACGAAACACAATAAACGCTGTCATGTTCTCTTTCGTTTGGAAGTGGATGCCTGATGATGCGTAAAAATTCTAAAAATGTGCATAAAAAATACACCCAATTAAGGCAGATAATTTTTTATCCAATAAGAAGACGTGCATAAACTACGTTGGAAACACATTTACTGAATAATCCTTTGATGCACAACAAAACGCTCGTGTGACTCTGTGATTGGATAACTGGACTAACCAGCGGACCAATCGCATCGCAGCATCTCAAATGTTGGTTTGGTGGTTCTGAAACGTCTGAGTCAAAGTCTGTCATCAGAATGATTTGGTTTAATTCCCTCCAGAAGCGTCTCACACGATTGTGTTCCCGAACACCAGCATCCGAACGCAAGATCACATGACAGTTTTTGTGTTTCGTCTGACGCTCTGAGACAAACTCATTTATGATGGAGGAAAAAGAGCCACTTCAATTTTTATTACTGATATTTTGTGCCAGTTTCCCAGAAAGTGATAATTTTGTTCTATTGTATGGATGGAAACGCTGCTTTATTTGGAAATGTTTTATGTGATATTCCAATTTTGTGCTCAAGTTAAATTTGCAACTTCCCGAAGAGTGACGCTTCCACAACACTGAACACTGGCAAACACCAGAACATGTACTTTTGCAATTAAAAAAAATGGCACACTTGTGAGTATATATAATAATCAATGGCAGAACATGGTTATATATGAAAAATAAA

Function

NR:

description
Zgc:163025 protein

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000299_06299968_06305021.mRNA True 2505 mRNA 0.47 8 6298896 6305158

Neighbor

gene id symbol gene type direction distance location
CI01000299_06295715_06298755 F7 coding downstream 121 6295613 ~ 6298775 (-)
CI01000299_06291499_06294321 F7 coding downstream 4021 6290549 ~ 6294875 (-)
CI01000299_06281861_06289368 NA coding downstream 8871 6279383 ~ 6290025 (-)
CI01000299_06274590_06278765 PROZ coding downstream 19764 6274427 ~ 6279132 (-)
CI01000299_06268189_06268676 NA coding downstream 29501 6268189 ~ 6269395 (-)
CI01000299_06306931_06307410 NA coding upstream 942 6306100 ~ 6307410 (-)
CI01000299_06310939_06311125 NA coding upstream 5781 6310939 ~ 6311229 (-)
CI01000299_06320613_06321046 NA coding upstream 15406 6320564 ~ 6321046 (-)
CI01000299_06337727_06341840 NA coding upstream 31981 6337139 ~ 6341840 (-)
CI01000299_06352251_06359190 DUSP27 coding upstream 46277 6351435 ~ 6360203 (-)
G407939 NA non-coding downstream 66621 6226412 ~ 6232275 (-)
G407923 NA non-coding downstream 76517 6220766 ~ 6222379 (-)
G407975 NA non-coding downstream 115361 6183135 ~ 6183535 (-)
G407971 NA non-coding downstream 152972 6145497 ~ 6145924 (-)
G407895 NA non-coding downstream 184406 6108478 ~ 6114490 (-)
G407986 NA non-coding upstream 84218 6389376 ~ 6389644 (-)
G407927 NA non-coding upstream 86886 6392044 ~ 6392356 (-)
G408001 NA non-coding upstream 111968 6417126 ~ 6432767 (-)
G408009 NA non-coding upstream 134363 6439521 ~ 6439736 (-)
G408010 NA non-coding upstream 135089 6440247 ~ 6440470 (-)
G407805 NA other downstream 462907 5835889 ~ 5835989 (-)
CI01000299_05428160_05443433 APP, APPA other downstream 842788 5427661 ~ 5443433 (-)
CI01000299_04913779_04927715 NA other downstream 1370078 4913373 ~ 4927715 (-)
G407413 NA other downstream 1748175 4475994 ~ 4550721 (-)
CI01000299_06526127_06532048 CEP97 other upstream 226843 6526127 ~ 6532048 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_000006 f7l coding NC_007112.7 CM002885.2 109798 ~ 119146 (+)