CI01000300_04100876_04103178


Basic Information

Item Value
gene id CI01000300_04100876_04103178
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000300
NCBI id null
chromosome length 11740502
location 4100876 ~ 4104415 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000300_04100876_04103178.mRNA
AGACGTGACCAGCAGGAGCGCAAGCGTGTGCAGAGGGAACTCAGAGTCCAGATCAGGGAAGCAAAAGAGCGGTACAGGAGGAATCTGGAGCAGAAATTGCAGAACAACAGCTTGAAAGAGGTGTGGGATGGGATGAAAATCACTGGATGCAGCTCCAAGAGGGGCAACACCATTGAAGGAGATGTGGAGAGAGCGAACCAGCTGAACAGCTTCTTCAACAGGTTTGACCACCCCAACTCACTTACACCTCATAACGCTGCACCCCTCACCCCCCCTTCTGCTCTTTCTGTCCCCCCAGGTACCAACCTTAGCACAGAGGAGAATGATCACCCTCCCATGATTACAGCAGCCCAGGTGTGCAGAGAGCTGAGGAGGTTTTGTCCCAGCAAAGCAGCGGGTCCAGATGGAGTATCTCCAAGACTGCTGAAGGCCTGCGCGTTAGAGCTGGGAGACCCTCTACAGCGCATCTTCAACATGAGCCTGGAACAGGAGAGGGTCCCTCAGCTATGGAAAACATCCTGTATCATCCCAGTTCCAAAGAAACCACACCCTGGAGGACTGAATGACTTCAGGCCAGTTGCCCTGACATCACATGTAATGAAGACCATGGAGCGGGTGCTGCTACACCACATGAGGCCACAGGTCCGCCATGCCCTCTACCCTCTGCAGTTTGCATATCAGGAGAAGTGCCTTCAACACCATCCAACCGCTGCTCCTCAGAGACAAACTGACAGAGATGTTCAGACTGTGGTGGCGAGTGCCCTCTTCTCTGCGGCGGTGTGCTGGGGAGGCAACATCAAGAAGAAAGACGCATCGCGTCTGGACAAGCTGGTGAGGAAGGCGGGCTCTGTCGTGGGCACAGAGCTGGATAGCCTAACAACTGTGGCAGAGCGATGGGCGCTGAGCAAGCTCCTGTCAATTATAGACAATCCATTGCATCCATTACACAACATCATCTCAAGGCAGAGGAGCAGCTTTAGTGACAGGCTGCTGACCACAGACCAAGGAGGGGAAGGTCAAGGCAGACATTTATCACTGATATCACTGATCTGAACTGTACTATACACTGTACTATACACTGTACACTAGGTAGCATAAATTGTGATTTGCACAGGACCTTTTTTACTTTTTAATTGAAATTTTATTACTTTTACATTCTTAGTATTATCGCATGCCTTATTGGTTGTGTATATTGCTAGAAATTGTGAATTTCCCTCTGGGATAAAGTATCTATCTATCTAGAATGCGCAAGTTGACTTGCGCCAAATGAGTAATCCTCTGACGCGATGTATGATGCAGGATGTAGGAGTATTGTAAGCTTATAAGCTTCTGGCAGGTCACGTCAGTCAAGCTCGCATCAGCTGACTCCCCGGTGACTCATGTCTACCTATGGGAATACAACGCCTATCACAGCATCCATATATAAGCTCCTCAGTATTATCAGCAGCTATTGCATTTCTCAGGAGCTAATTACCCTCCTCCATCCCCAGCTCCTCCTCTCTTCAGTCTGGATTTGCCTTATGATTCCCCTGAATCAAACTAATTCTTGAAATATGTGTTCGTTAAATTATATCTGCATATGTTGGTTCTGGTCTGTTTACCCTAGGGGGGGTTATTGCTGCTCTCCCTGCTCTTATCCATACTAGGCCGCATGGATGCGCAGGGAGTTCTTGCTCAGAACAGAACCATACTGCCAGTACAAACTCTATGCAATTATCAATCATATTTGACGATAGTGGTCCTGACAGAAATAGGGCTGTGCAACAAATTTAAGCTCCTCTTCTCTTATATTGAAATCCTCCAACATTTCTCTTTAAAAATGATCATTTTAGATTTATAATCTGTGACCGGTGATTTGTTTTTCTCTATCCTCTGTGTTTCTCTGCGTAATTATGTTGTGCGTCAGGTCTAAGGATACTCTTCCGCCGCAAATCGACTTTACGGTCGTCCACCGGAAGCTTGCTATTTGAAGTTATAAAGTTTTAAATATGGATATTTTTCTTACAAAATGCATCGCTTCGCTTCAGAAGACCTTTATTAACCCACTGGAGTCGTATGGATTACTTTTTTTATGGATGGACGCATTATTTTTGGCTTCAAAACACGGCCCCCCATTCACAACCATTATAAACCTTGGAGGACTAAGGATATTTTTAAATATATCTCTGATTGTTTTCGTCTGAAAGAAGATAGTCATTTACACCTAGGATGGCTTGAGGGTGAGTAAATCATGGGATAATTTTCATTTTTGGATGAACTAACCCTTTAAGAACTATTAATTGCTCGTGTA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000300_04100876_04103178.mRNA True 2290 mRNA 0.46 3 4100876 4104415

Neighbor

gene id symbol gene type direction distance location
CI01000300_04054526_04057476 NA coding upstream 43363 4053498 ~ 4057513 (+)
CI01000300_04035454_04049805 STIM2A coding upstream 51055 4034317 ~ 4049821 (+)
CI01000300_04021130_04027987 RBPJ.S, RBPJ, RBPJA coding upstream 71267 4019875 ~ 4029609 (+)
CI01000300_04008515_04015444 SLC34A2A coding upstream 85320 4006977 ~ 4015556 (+)
CI01000300_03994394_03997804 CHIC2 coding upstream 102113 3994394 ~ 3998763 (+)
CI01000300_04105718_04107800 NA coding downstream 1303 4105718 ~ 4107849 (+)
CI01000300_04211928_04219961 NA coding downstream 106754 4211169 ~ 4220143 (+)
CI01000300_04391216_04429569 PCDH7A coding downstream 286343 4390758 ~ 4430154 (+)
CI01000300_04439356_04442462 NA coding downstream 334803 4439218 ~ 4442690 (+)
CI01000300_04443587_04462530 HGSNAT coding downstream 339172 4443587 ~ 4462719 (+)
G410368 NA non-coding upstream 15694 4083018 ~ 4085182 (+)
G410383 NA non-coding upstream 47555 4050447 ~ 4053321 (+)
G410366 NA non-coding upstream 81135 4019536 ~ 4019741 (+)
G410359 NA non-coding upstream 121607 3979044 ~ 3979269 (+)
G410354 NA non-coding upstream 147462 3953176 ~ 3953414 (+)
G410375 NA non-coding downstream 22761 4127176 ~ 4129355 (+)
G410649 NA non-coding downstream 165900 4270315 ~ 4270720 (+)
G410659 NA non-coding downstream 203155 4307570 ~ 4307813 (+)
G410710 NA non-coding downstream 300386 4404801 ~ 4407968 (+)
G410733 NA non-coding downstream 424617 4529032 ~ 4560250 (+)
CI01000300_03901275_03902800 NA other upstream 198725 3901148 ~ 3902892 (+)
G409984 NA other upstream 828478 3271685 ~ 3272398 (+)
CI01000300_02313596_02320912 NA other upstream 1786982 2312515 ~ 2321088 (+)
CI01000300_01753916_01754815 NA other upstream 2341840 1753916 ~ 1754980 (+)
G408910 NA other upstream 2465907 1633030 ~ 1634969 (+)
G410382 NA other downstream 19283 4123698 ~ 4124416 (+)
G410388 NA other downstream 91231 4195646 ~ 4196555 (+)
CI01000300_05891147_05892754 HELT other downstream 1786652 5891021 ~ 5892824 (+)
G411777 NA other downstream 2364830 6469245 ~ 6469705 (+)
G413459 NA other downstream 4840068 8857687 ~ 8948603 (+)

Expression


Co-expression Network