CI01000300_06434048_06444297 (FAM114A1)


Basic Information

Item Value
gene id CI01000300_06434048_06444297
gene name FAM114A1
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000300
NCBI id null
chromosome length 11740502
location 6433689 ~ 6444297 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000300_06434048_06444297.mRNA
AGTGCCAAACGTTCAGGTGACGTCACTGGCCACACAGCCGCACGCGACACTGCTGCCGACGTGGCGCGAGCTCGAGCGGAAGGGTTGCGCGAGCGCGACTGTCAGCAGAACTGTTATTTTGCAAACCTTAGTCAGAGCTCAGCTGTCTCAGCGTTGAGTCGGAAGTTAGTTTGTTGTCATTTACAGCCAATCATCTTCCAGCTGCTTACATGGCCTCTCATTACACTTTGTTTGTTTGTCTGGTTTTATCAGAGCACCATGTCGCAAGATGAGACTGTGGAAGACCTCACTGCAAAATCTCCCCCTTCCCTCCACGCAACTGCCTCTGATGAAACTGCCCCCATAGCTGCAGTCAGTACAGATGAGGTCCCGTCTTTATCACAGCTTTCACTAAACACAACGACCCCTGACCCAACAAATGCGGCTGCGGAAGAACACGGTACAGCCAAAAGTACTGAAGAGAAGCAGCCCCTGGATGAGTCTAAATCTAAAGGCTGGAGTAGTTGGGGCTCCTGGGGGAAGTCACTTCTGACCACTGCTACATCCACTGTGGGTCAAGGGTTAAGCTCTGTAAAAGAGAAAGCAGGTGTGGCGTTCCGAATTCGTCAGAGCTCATCATGTGAGGAGGCAGAAGAGGCCCATGAGCATTCTGAGACAGAGATGGCAGAACATGTACATTCAGAGGAGGTGCACAGAGGAGTACTGTCAACCATCAGCAGCGCTGTTCAGAACACTGGAAAGTCAGTAATAACAGGAGGTCTTGATGCTTTGGAGTTTATTGGAAAGAAGACCATGAATGTCTTGGCAGAGAGTGATCCAGGCTTTAAAAAGACTAAAATACTGATGCAGAGAACTGTCTCTCTTTCTCAGATGTTAAAAGAAGCAAAGGAAAAGGAGAGAGAGAGAATGAGCAGTCAGATGGTCACAGAACCAACCGCCCACTATGGGATCTTGTTTGATGATTACCAAGGCCTGTCTCATCTTGAGGCACTGGAAATTCTTTCCAATGAGAGTGAAGGAAGGGTGCAGGAATTCTTGTCCTCTTTGGAAGAGGAAGATTTGGAAGTTCTGAAGAAGGAGCTTATTGCGATTAAAGAGATCTTCATCACTCGTGAGGAGGAGGAAGCTGATGCCATCTCAGAGGAAAACGGTGATCTTAATTCACAAATTCATTGTTCCACTCCTCTCTCTGCTGATGGAGAGGAGTTTGTCAGCGTTCTTACTGAGCTTCTCTTTGAGCTCCACGTCGCTGCAACTCCAGACAAACTAAACAAAAAGGTGTATCTGTCATCAGTGGGCAGTCTTGCTGAAGTTACCGCTCGTAGTATAGAACAGCTACACAAAGTGGCTGAGCTGATTTTACACGGACAAGAGCTGGAGAAGCCAGCCTGCCAACAGGCCAGTATACTGGTCAGGTTAACCAGTGCCATGTGTAAGGAGGTTGGATGCCTGGCCCGAAAGTTTTCGGACACATTACTGGCTGTAGGGAATCAGAGAAAGGCAGAAGAAGTAAATCCTCTAGTGGACAGTGTGATGCTGGAGGGTTGTAATAGCACTACCTACATCCATAATGCATTCCAGCTGCTGTTTCCTGTTCTTCAGGTCTCACACATCCAGACCAGCAGAACCGCAGTCAAGCCAGCCCCAGAACCAGCATCCACAGAATAGTGCCTTCGTTCTGTTTGTGTGTGTTACTGTCTGTGTTTGTCTGTATCTGTGTATTGTGTTTAGGTATGTTGCTTCAATATGAGAGCTTAAACCAAAAAAGTGCAATTCTAGTCTATATATAGACTCTTACAAAGAGATAATTAAGAAAATAAGATTGAAACTCCTAACTTATTTAGGAAGCTGCTTAATTATGTATCATCCTCTTGATACTATGTCCATTCTTTTTTTTTAAGTTACTTTACTGAAAATGAAGATTATTAATCATGTGTTGCATTGTCTGAGCAGATTTGGAGGTCCAACTGTCATTCGCCTAAATTAATCAATCACTCATACACAATACTGTTTTTATTTTGAATAAA

Function

symbol description
fam114a1 Orthologous to human FAM114A1 (family with sequence similarity 114 member A1).

GO:

id name namespace
GO:0005575 cellular_component cellular_component

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000300_06434048_06444297.mRNA True 2027 mRNA 0.45 12 6433689 6444297

Neighbor

gene id symbol gene type direction distance location
CI01000300_06347127_06393685 KLHL5 coding downstream 40004 6346937 ~ 6393685 (-)
CI01000300_06282739_06327586 MTNR1AA, MTNR1AB, MTNR1A coding downstream 106103 6282739 ~ 6327586 (-)
CI01000300_06039087_06039798 NA coding downstream 392819 6038932 ~ 6040870 (-)
CI01000300_05982822_06013144 SORBS2A, SORBS2 coding downstream 420545 5982379 ~ 6013144 (-)
CI01000300_05966800_05976695 PDLIM3A, PDLIM3 coding downstream 456994 5966112 ~ 5976695 (-)
CI01000300_06445229_06453282 NA coding upstream 862 6445159 ~ 6453282 (-)
CI01000300_06557191_06577750 PGM2 coding upstream 112714 6557011 ~ 6578140 (-)
CI01000300_06716502_06718598 NA coding upstream 271688 6715985 ~ 6718785 (-)
CI01000300_06750413_06795270 PTPRDB coding upstream 305588 6747460 ~ 6795270 (-)
CI01000300_06873593_06881540 RBM47 coding upstream 429178 6873475 ~ 6882386 (-)
G412452 NA non-coding downstream 1379 6431939 ~ 6432310 (-)
G412639 NA non-coding downstream 94983 6338507 ~ 6338706 (-)
G412633 NA non-coding downstream 100587 6332894 ~ 6333102 (-)
G412607 NA non-coding downstream 166240 6266951 ~ 6267449 (-)
G412604 NA non-coding downstream 169041 6264346 ~ 6264648 (-)
G412657 NA non-coding upstream 36615 6480912 ~ 6481133 (-)
G412668 NA non-coding upstream 137982 6582279 ~ 6583399 (-)
G412665 NA non-coding upstream 156074 6600371 ~ 6603957 (-)
G412692 NA non-coding upstream 163965 6608262 ~ 6608475 (-)
G412736 NA non-coding upstream 259055 6703352 ~ 6706924 (-)
G412555 NA other downstream 218110 6214920 ~ 6215579 (-)
G412378 NA other downstream 672500 5711685 ~ 5761189 (-)
G411012 NA other downstream 2038568 4390320 ~ 4395121 (-)
CI01000300_04075307_04079312 NA other downstream 2351587 4074636 ~ 4080539 (-)
G410498 NA other downstream 2625482 3801139 ~ 3808207 (-)
G412681 NA other upstream 208701 6652998 ~ 6690333 (-)
G413140 NA other upstream 1702235 8146532 ~ 8146889 (-)
CI01000300_08959695_08973598 UGDH, UGDH.L other upstream 2525151 8958963 ~ 8973750 (-)
G414498 NA other upstream 3213752 9658049 ~ 9713722 (-)
CI01000300_10698449_10700497 NA other upstream 4251714 10696011 ~ 10701375 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location