CI01000300_10661680_10669987 (MXD4.L, MXD4)


Basic Information

Item Value
gene id CI01000300_10661680_10669987
gene name MXD4.L, MXD4
gene type misc
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000300
NCBI id null
chromosome length 11740502
location 10661680 ~ 10674265 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000300_10661680_10669987.mRNA
ACGTGCCAAACTGCGATTGTACCTGGAGCAGTTAAAACAGCTTGTGCCTTTGGGTCCTGATAGCACCCGTCACACCACACTGAGCCTGCTCAAACGCGCCAAAATGCACATCAAGAAGCTGGAGGAACAGGACAGGAAGGCTCTAAACATGAAGGAGCAACTGCAGAGAGAACATCGCTACCTCAAACGGCGTCTGGAGCAGCTCTCTGTACAGGGCTTAGAGCGCATTCGCACTGACAGCATGGGCTCCACCATCTCCACTGACTCTGAGCAAGAAGTGGACATTGACATAGAGGGAATGGAGTTCACGCCAGGTGAGGGTGATAGTGTGGACAGTGTTAGCGATGGTGAGGACCACTACAGCCTGCAGAGCAGCTCCAGCGATGGAGGCCACCATTCACATTCCCACAGATTACAGGCTCACATCTGCTAGGCCGTGTCAGAAGGCAACAGTGTGTCACCTCCAACATACCCATCAGCCACTCCCAGCTGGCAGGAAGCACCTGGCTGATTTCCACTCCTCAGAAAACTCTCTCTCCCCTCTCAACCCTTGCAACACTTTATATCAGACCCCCCTCCAACCCCACAAATACACACAGACAAGCAATATGTGGTTTTAGTGAGAACATGTGGTGTGGTAATGCAGTTTTCACTTGTCTGTTTTGCTGCTGTGTGAAATTGTGGCTCTGTTCCTAAACCTAGTAACTGCCTTGCTGTCTATCATCTACATTGGCAGTCTACATTGGTATCATCTAAGGCAGTATCTTAACTGAAATTGATCAAAATTATAAAACACTATATAGGCTTGCTTATGTGCATCACTCACATAACTCACATTTTAATCAAATATATCCAATTCCCATTGGAATTCCAAGCCACCACAGGCGAGGGCAACACATTTACCCACAAAGATAACTTCTCTTAATGTGGAGCACACATGCCTGTGCACCCTCACACAAAAACTTGCAGCTTCTTTTACTGAGGCAAAAATTTATAAATAGAAGATTGCACACACACACACACACACACAGGAACACAGAACCTTGTTTTGAGCCGCTGCCCTGTGAATTTTATAAATAAAATAGCTTCACTACTGAAAGCTACAATATATTTTTCAGCAACAAAGGGGATAACGTTGCTGTTTTTGAAGCCATTAAACTCACAGCTTCACTATATAAACTAGATGCAAGTAAATCACATGCACAGTCTCTTTATCGAATACATTCAAATAATCTTAGAAGGTTAGATCCAAGTTACAAGTTGTTACAAGATACAAGTTGTGTCTTAAATGACTAAACAAGTGGGACAAAAAATCGGATATGGTCAAAAGATCACATCTGTGCATTAAGCCTTGTACTGTAAACACAGCCTTTGACTGTTCCAAAAAGTTGGAAGTTAGACTATAATATCTAAAAATGTTGTCTATCTAGGCAGCTTGCTAGTTTTGGGAATAGAGCTTGCTTGTGTGCCAGTTCATTTTGCACAATGGGCTTGAACAGAATTCTTGTGTTTCTTGAAACTGCAAGACATAGCATTAAGCACATTAATAGACTCCTTAATAGACTAATGGAAAGGGAGCAAAAGGCTAAAACTTCAGGGTACTTCTAGGAATCAGTGGTTTCTATTTCAGATTAAAAAATGTTATGTTCTCACCACACAGTTAAAATGACCTTGAAGTTCATTAATTTGTTACTTTTTTGTGAAAGAAGAAAGAATATTAATATCTAATGGCTGATTACTTGTGTAATTAATTAAAACACTCAGTTGCGACAGGAACAAAAAAAATGGTGCTGTCCAGATGCATCACTACGACAGTCTGTTGTCAATACTTTTAGTAGTAAATTATGTAGCA

Function

symbol description
mxd4 Predicted to enable protein dimerization activity. Is expressed in head mesenchyme; notochord; pronephric duct; and pronephric mesoderm. Orthologous to human MXD4 (MAX dimerization protein 4).

GO:

id name namespace
GO:0005634 nucleus cellular_component

KEGG:

id description
K09114 MXD, MAD; MAX dimerization protein

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000300_10661680_10669987.mRNA False 1852 mRNA 0.42 3 10661680 10671406

Neighbor

gene id symbol gene type direction distance location
CI01000300_10604458_10604787 NA coding upstream 56647 10604458 ~ 10605033 (+)
CI01000300_10496235_10498777 FABP2 coding upstream 162736 10496174 ~ 10498944 (+)
CI01000300_10445111_10492819 GUCY1A3, GUCY1B3 coding upstream 168138 10445111 ~ 10493542 (+)
CI01000300_10401994_10404248 NPY2R coding upstream 257005 10401565 ~ 10404675 (+)
CI01000300_10387736_10392987 LRAT, LRATA coding upstream 268638 10387176 ~ 10393042 (+)
CI01000300_10675299_10675754 NDUFB6 coding downstream 3183 10674589 ~ 10676912 (+)
CI01000300_10682604_10685243 TOPORSA, TOPORS coding downstream 9911 10681317 ~ 10685274 (+)
CI01000300_10688627_10696530 MTAP.L, MTAP coding downstream 17221 10688627 ~ 10696530 (+)
CI01000300_10764813_10766212 NA coding downstream 92727 10764133 ~ 10766249 (+)
CI01000300_10854388_10857566 NA coding downstream 182982 10854388 ~ 10857574 (+)
G414455 NA non-coding upstream 28100 10632727 ~ 10633580 (+)
G414444 NA non-coding upstream 105261 10555288 ~ 10556419 (+)
G414432 NA non-coding upstream 232536 10428815 ~ 10429144 (+)
G414424 NA non-coding upstream 241900 10419553 ~ 10419780 (+)
G414423 NA non-coding upstream 242541 10418559 ~ 10419139 (+)
G414488 NA non-coding downstream 29378 10700784 ~ 10701961 (+)
G414495 NA non-coding downstream 55834 10727240 ~ 10727441 (+)
G414496 NA non-coding downstream 62210 10733616 ~ 10738720 (+)
G414840 NA non-coding downstream 69331 10740737 ~ 10741038 (+)
G414860 NA non-coding downstream 88186 10759592 ~ 10759872 (+)
G414249 NA other upstream 287782 10369911 ~ 10373898 (+)
G413459 NA other upstream 1713077 8857687 ~ 8948603 (+)
G411777 NA other upstream 4191975 6469245 ~ 6469705 (+)
CI01000300_05891147_05892754 HELT other upstream 4769255 5891021 ~ 5892824 (+)
CI01000300_11704476_11708232 NA other downstream 1032078 11704476 ~ 11708351 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_000314 mxd4 coding NC_007112.7 CM002885.2 26071869 ~ 26096572 (+)