XLOC_000314 (mxd4)


Basic Information

Item Value
gene id XLOC_000314
gene name mxd4
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007112.7
NCBI id CM002885.2
chromosome length 59578282
location 26071869 ~ 26096572 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00000512
GTTGAGAGTCTGTACGACtcagaattgaaccgttcatatCGAGCGTCatcacttttttgtttatttgtttgtttgtttttattttgtttctctcTTTGATTTATACCTTTTGTTAAAGTGTGCATTCGTTTTTgttgtgtgtaattttatttctgcAAATACACCAGGATGGAACTTAATTCTCTTCTCCTACTTCTTGAGGCAGCAGAGTATTTGGAAAGAAGAGACAGAGAAGCTGAACACGGTTACGCATCTGTTTTGCCGTACGATAGTGACTTTTCCAGAAAGAAAACTAAATCACCCATTTCAAGAAAACCCCACAACAACAGGTCATCACACAATGAGCTGGAAAAACACAGACGTGCCAAACTGCGATTGTACCTGGAGCAGTTGAAACAGCTTGTGCCTTTGGGTCCTGATAGCACCCGTCACACCACACTGAGCCTGCTCAAACGTGCCAAAATGCACATCAAGAAGCTAGAGGAACAGGACAGGAAGGCTCTAAACATGAAGGAGCAACTGCAGAGAGAACATCGCTACCTCAAACGGCGTCTGGAGCAGCTGTCTGTTCAGGGCTTAGAGCGCATTCGCACTGACAGCATGGGCTCCACCATCTCCACTGACTCTGAGCAAGAAGTGGACGTTGACATAGAGGGGATGGAGTTCATGCCAGGTGAAGGTGATAGTGTGGACAGTATTAGCGATGGCGAGGACCACTACAGCCTGCAGAGCAGTTCCAGCGATGGAGGCCACCATTCGCATTCTCACAGATTACAAGCTCACATCTGCTAGGCTGCAACAGTGTATCACCTCCAACTTACCCATCAGCCACTCCCAGCTGGCAGGAAGCACCTGGTTGATTTCCACTCTTCTGAAAACCCTGTCCGCTTTATATCGGAACCCTTTCCCCCACAACACCCCCTGCTCCAACCCCACAAATGCACACAGGCAAGCAATATGTGGTTTAAATAAGTACGTGTGTGGTAACGCAGTTTTATCTTGTCTGTTCTGCTGTGTGAGTGTGAGATTCTATGGCTCTGTTTTAAAACCATAGTAACTGCTTTTACTGTCTAGTATCTAAACAGGTAGTCCTATCATCAAAGGCAGAATCTGTACTGACCTTATATGTGATTAAAAGACACTCTAAAGTTGCTTATATGCATCACACAAATAGCGCCCTTCATGAACCAGTGACTTCATGAAATGTGTCGTCACTTTATTGAAATTTTGGCAAAAGATTTCGATTTGTGTAGTGCATTTTAGCTGCATTTACACTAAAACAAAATCAGAAAGAACAGTTCATTGTGACACAAATTGTTATGCTTGAGTAAACAAAAAACTGCCTCCATTCTGAGCCACTTTCAAAATTGATTTtagatagaaataaaaaaaagtaaaggcACAATTCATCCaaaatttactcacccacaagtggttttaaacaagagaagatattttgacgaaTGTTAGAAACTGGAACCACTGACTCCATAGGACGAAAAACAAATGCTGTGTATGTCAATgtttaccagtttccaacatattttgtgttgaacataaaaagaaactcaaaaaggtttctgacaagtaaatggtgagtaaatctTGACtggtttttgggtgaactgtccctttatgaTTCACTAGTTGGTTCCTTATTTGTGAACGTAAAGAGAAAGTCCTTATTGGTTGAAAGTTGCGACAGCagcaaaaacacaaaaatgacGCTATCCAAAATGCATTAGTGTTTTAGTCTTTATGTTAAACCTTGAGTAGTAAATGATGTAGCAATAAACATAGAAAGCAATGGCTTTCTTATGCAGTGAAATGATTCTGGACCAAACCTTCAAGACATGAAAAGCTTACTAATTCCGTTCGTCTTTTCACCTGATTTGTTTAGATTGTATGCACTCAAACTGACAAGTCAAAATTTGTAAGACTGTAAGTTTTAGGGGGTGGGCAAAACTCTTTGTTGAGTTGTTGGTACTATCAGAAAATGACAATAATGCTTATAGTTCCACGTCTTTCCCCTTAACTTAATTGCTTACGTATGTTTTGAAGCCTTTGTTCCTCAGCAGTATATATGCAGTGCAGTGTGCAATATTCAGAATATAAAAGAAAGGTCTTTGTGCTGGGAATTCCAAATCTTCACAGACAGCCCCAGTTATCAAAGCAGGTCAGAccaaaataaattaggaaacaAATAAGTATGTAAAAGACAAATGTACGTTTGAGAAAAGAAAAAGGTATATTCATCACTGAAAGTGATTTAAACAAGCGTAGTTTATATTTTCTGTAGTAgcttttgtattatattttccTAAATAGTCCTTCATTAAAAGACAAATAGAGGagtatatgaatataaatataaatatataaataaaatatatgaaaatgacAGAACATAAGGCCGGGGCTAATGTTTGGGAGAACTTTTTCCCATATCTCCAACTGTCATGCTGTGCCTTGCCTTGTTGTATCCCCATTTTCTTCCAATCTCCTTCTCACATCCACAACCAGCCAGCTTCCATCCTCACAATACACTCTTTCTTGTCCTTTTGGCCTTTTGCACATAGTGACGAAAAACAAGGCTTTGTCTCCTCAACCTCCATCTTACGGACCTCCAAAAATATGCTTTCAATTTTGCGAAGCAACATCATCCGCATCTGCGACACTGGTCGTCTTCACTCGTGGCAGCTCGTCTCTCCCCATTGAAAAGCTATCTAACCAACTCTGCTCTTGTGGCTCTTTtcattgggttttttttttttgttgttgaattttttaaataGCTGTCTGTTTTTATTGTCCTTATGTTTAAGATGTGTTATGTATTTCAAACAATGAAGTGGAAGACCTTGGGAGAAGAGCATTGGAATCAATCATTAATGGCAGCTCTAGACTTCTCCACCCTCTCTCAATGGTAATTCCTGACGTAGTATTAAAGTCTGCTCAAAGGTATGATCACTTTAGCGTTACTGCTGCGCAAATATCTTGAGCAAAAAATGTCAATAACGTAGAGCTGTGGGTCAAAGACAAAGATTTACAAAGAAATTTATTCATATAGAACCCACTGTAAGTGATAAAGTGTCTGAtttagtgtttacatttttttttgtgcaaaatgtCCGACAATATTTGGTAGACAAGACTGAATCACATATAGTTAATGTATTCTGTAAATCAAGGTAAAAATCTGTGACTGTTGACCTGCTTGAAAATTAACTAAGAAGTGAAACTCAAATTGTGTGGATTAGCATGGCTTGATTTTGCTCATGACATTTCGCCCAGTTACTGTAAATGTGACCAAACTTTAAGCAGATCATAGTATTCGATCCTCTACCCATAAGAGCAATGATACAGCAATATGATTCTTCAATTTGTAAAGCAGTGAGGACTTGAGTGTAATGGTAAACAGCACTGTCTCAATACTATGGTGCATATTGTGACCAACtcataagatttttatttttattttagtttttactattttatttctccatttttttcaacactgaaaggagaaaaaaagtttttttatttttgtttttttaaaagctaCATTTTTATGAAGAGTTTACATTGTATGTCATGGTATGCCTGACTGTTGTAGCAGAATCTGCTTTTTCAATTTGTTGTTCAAGTGACTcattcaatcaaaaaaaaaaaaaagctcttgcACAGAACCTCCCATTACCATGCTTTGAGTGAGAGTTCAGAGAATTGGGGATGAGAATATGAACATATATGTTTGCATGTCTAAGAGATTATAACTTTTAATTGGCATTATAGACGAAGTCACATGTGAAATTAGAGCAATGTCAATTTCCAGTGTGGTGAAAGAAATACTTTATGACAGAGACAGGGTTATTCAGTGGCTGCAGGGTTTTTTAGAAGCTTTAAAAACACTACAGTG

Function

symbol description
mxd4 Predicted to enable protein dimerization activity. Is expressed in head mesenchyme; notochord; pronephric duct; and pronephric mesoderm. Orthologous to human MXD4 (MAX dimerization protein 4).

GO:

id name namespace
GO:0008150 biological_process biological_process
GO:0005575 cellular_component cellular_component
GO:0046983 protein dimerization activity molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-050208-44 Predicted to enable protein dimerization activity. Is expressed in head mesenchyme; notochord; pronephric duct; and pronephric mesoderm. Orthologous to human MXD4 (MAX dimerization protein 4).

Ensembl:

ensembl_id ENSDARG00000054031

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00000512 True 3919 mRNA 0.38 6 26071869 26096572

Neighbor

gene id symbol gene type direction distance location
XLOC_000313 BX323448.1 coding upstream 26154 26012668 ~ 26045715 (+)
XLOC_000312 fabp2 coding upstream 220294 25848231 ~ 25851575 (+)
XLOC_000311 gucy1b1 coding upstream 230210 25801648 ~ 25841659 (+)
XLOC_000310 gucy1a1 coding upstream 272818 25783801 ~ 25799051 (+)
XLOC_000309 npy2r coding upstream 338002 25732715 ~ 25733867 (+)
XLOC_000315 ndufb6 coding downstream 2678 26099250 ~ 26103232 (+)
XLOC_000316 toporsa coding downstream 8569 26105141 ~ 26109961 (+)
XLOC_000317 mtap coding downstream 14413 26110985 ~ 26127944 (+)
XLOC_000318 tet2 coding downstream 259633 26356205 ~ 26402046 (+)
XLOC_000319 arhgef38 coding downstream 314924 26411496 ~ 26437820 (+)
XLOC_000308 NA non-coding upstream 350167 25719653 ~ 25721702 (+)
XLOC_000305 NA non-coding upstream 518570 25550053 ~ 25553299 (+)
XLOC_000304 NA non-coding upstream 629168 25440037 ~ 25442701 (+)
XLOC_000301 BX005016.1 non-coding upstream 951664 25120089 ~ 25120205 (+)
XLOC_000300 NA non-coding upstream 1471881 24596326 ~ 24599988 (+)
XLOC_000322 AL954695.2 non-coding downstream 454462 26551034 ~ 26554839 (+)
XLOC_000323 AL954695.3 non-coding downstream 480716 26577288 ~ 26584593 (+)
XLOC_000325 NA non-coding downstream 568117 26664689 ~ 26671210 (+)
XLOC_000327 NA non-coding downstream 643543 26740115 ~ 26741149 (+)
XLOC_000335 NA non-coding downstream 2375627 28472199 ~ 28473413 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location