XLOC_000313 (BX323448.1)


Basic Information

Item Value
gene id XLOC_000313
gene name BX323448.1
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007112.7
NCBI id CM002885.2
chromosome length 59578282
location 26012668 ~ 26045715 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00000511
atctcACCTCAGAACATGTTTTTGGCAGAAAAAATACAGTGTGTTCATAAAAGTTCAGGCAATTATATGAAAATTACAATAAAGCatcatgatggACAGAGTCAATCTGACTGCAGATCAACTGTAACCGCATTATCCAAAcctcagaaaaatagtgaaagtagttttaaaacacttagtagatatttactaaatttttttacgGATTTActgatattttatataattacccTGCTGAAG

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000116236

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00000511 True 240 mRNA 0.31 12 26012668 26045715

Neighbor

gene id symbol gene type direction distance location
XLOC_000312 fabp2 coding upstream 161093 25848231 ~ 25851575 (+)
XLOC_000311 gucy1b1 coding upstream 171009 25801648 ~ 25841659 (+)
XLOC_000310 gucy1a1 coding upstream 213617 25783801 ~ 25799051 (+)
XLOC_000309 npy2r coding upstream 278801 25732715 ~ 25733867 (+)
XLOC_000308 NA coding upstream 290966 25719653 ~ 25721702 (+)
XLOC_000314 mxd4 coding downstream 26154 26071869 ~ 26096572 (+)
XLOC_000315 ndufb6 coding downstream 53535 26099250 ~ 26103232 (+)
XLOC_000316 toporsa coding downstream 59426 26105141 ~ 26109961 (+)
XLOC_000317 mtap coding downstream 65270 26110985 ~ 26127944 (+)
XLOC_000318 tet2 coding downstream 310490 26356205 ~ 26402046 (+)
XLOC_000305 NA non-coding upstream 459369 25550053 ~ 25553299 (+)
XLOC_000304 NA non-coding upstream 569967 25440037 ~ 25442701 (+)
XLOC_000301 BX005016.1 non-coding upstream 892463 25120089 ~ 25120205 (+)
XLOC_000300 NA non-coding upstream 1412680 24596326 ~ 24599988 (+)
XLOC_000322 AL954695.2 non-coding downstream 505319 26551034 ~ 26554839 (+)
XLOC_000323 AL954695.3 non-coding downstream 531573 26577288 ~ 26584593 (+)
XLOC_000325 NA non-coding downstream 618974 26664689 ~ 26671210 (+)
XLOC_000327 NA non-coding downstream 694400 26740115 ~ 26741149 (+)
XLOC_000335 NA non-coding downstream 2426484 28472199 ~ 28473413 (+)

Expression


Co-expression Network