CI01000304_09622805_09640521



Basic Information


Item Value
gene id CI01000304_09622805_09640521
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information


Item Value
chromosome id CI01000304
NCBI id null
chromosome length 18613800
location 9622376 ~ 9640540 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence


>CI01000304_09622805_09640521.mRNA
AATAACCAGAAGGATCACGATGGACGAATATCCCATCATTGTAGAAGGAGACTGGGGGCCTGAACACACAAAAAGTGTGAAAAATAAACTTCATATTCACTTTCAGAGCAAGAAGAAATCCCAGGGAGGAGACTGCGTCGTGCAATATAATGACAAGAGCAACTCTGCTACGATTCTGTTCAAATCACCTTACGTCCGAGATGCCGTACTCTCCCAGGCAGAACACATTATTACTATTGACAGTAAGCAAATCAAGCTGAAAGTGTTCAAACCCAGCGATGTAGAGGAACAAGCAGACAACACTGGACAAAAGACGCAGCAGGCATGTGGAAATCAGAAATCAAGCCAAGATGATGTTCTCTCCCAGAAGAAACATGTTATTACCACTGAGAGTCAGAAAGAGTTCAAATCCAGTGATGCAGAGAAACAGGCAGACAGCACTGGACAAAGAATGGAGCAGGCAAGTGGATATCAGGAACCAAATCAAAGTGTCCTACAAACTAATTTGGATGTGAAGAAGCCTCAAGAGTCAAGTGCTGTGGTCCTGGAGGACCTTCCAGATGATTTTAATCAAGATGTTTTGACTCTTTTGGTGGAGAACATCACCAGTCTTTCTGAAAATGACTTTGGCATGGAATTAATACCAGAATTAAGAAAAGCTGTTGTGACCTTTAAAAATCTCAGTGATGCAGGAAAGTTCCTTGTGGACAGCAGGACACATGAAAAGTTCAAGAAGAATAATCTGAGGGCCCGTGCACTGGAGAGAAGCACGTGTGTGCGGGTGGAGAACCTTACAGATGAGGCCAGCACAAACAAGATGCTGCTGGAACTGTATTTTGAGAAATGGGGTGGTCCAGTAGAGGAAATTATCACAAATCCATCAGAACAAGCAGCCATTATTACCTTTAAGGAGGAAGAAGTCAAGATATATCCCTACTTTAAATCACTGGATACAGTCTTGTATGGTGGAAACAGACCACATTTGAAGCTGCCTGATCCCATTACAGTCAGTGTACATCCTGCCATCAGAGAGTTACTTCTCAAGAAAGGGGAGATTTCCTCTATTAAATGCCAGATGAGCTCACACTTCTGCCAAATAAACATGGACAAACCTGAAGCTTTGCTCAGTCCTGATCCAGCATTACTGAAACAGAAAGGAGTTACCAGAAGACACGTTGACGGCTGGAGTAAGAATGCCTGTGATGCCTTCATGAAAATAATCTCAAAGTACACAACATCTGAGTGGCCGGTGTCACACCCCTTGTGGTCTAAAGTGGAGAGTGATGTTAAGGAATTGGTGAAAGATAAGGTTTTCACAGATATGGATGCCTCTAAAGGTGTCCTGACACTGGCGGGAATGACCCATGAGATAATTGGACTGAAACTCATCATGGAGAAAATTTTAGAGAGAGCAACAAATCACATGGAGAGAGAGAAGAACAGTGTGACAGAACAAATGGAGATGTCTCCTGCCATGTACTCTCTGCTTTTACAAGATGGCCTGAAAAGTGCTGTTTCTCCACATCTACACATTGACTACAACAAAAAAATGAACAGGCTAAATTTATCCGGTCTTCATACAGAAACTCTTACCTTCAAGAATTGGGTCCTTGAGAAGAAAATAAATATGAAACAAAAGCCCTTAAAGATTGACCGTTCAATCCTGGAGTTCCTTAGATCAGTGGATTGTAATGAAATGTCCACAGATCTCTTCATATCTCATGGAATAACTGCTGTCTACACAATCGAAAATGGAGATGTTGTTTTGACTGGGAGCACAGAAAAAGCACTTGTTGAGGCAGAGAAGAGGGTGAATATGGTTCTTACATCCAAAGACCTCATTATAGAAGATCAGGGTGTCCTTCAAATGACAGAGTGGCAGGATCTCAAAAAACAATTGCAAAAATCATTCAATACATCCAAAAATATATCTGTGTTGAATCTTTCACAGAGAGACAAAGTAATAGTGACCGGATTCAGAGATCCAGTGATGAAGGTCAGTGAGAGCTTAGGACGTTTCATTGAGAAACACACTAAAATTGAAGAAACAGTTCGTGTAAAATCACATGCAGTGGTTGAATTCATAAAAGACAGAAAAACACAAGACTGGCAGCACATTATGAAGTCTGATAAAATTAAAGTGAAATTTGATTCAAAGAGACCCTGGATCAAACTGTCTGGAGAGCGAGGATTTGTCCAGCCAGCTATGACTTTCTTTAAAAGGTTGGCAGATTCTCTCCACACAGACACACACATCATTAAAAAGGCAGGAGCAAAGAAGTACTTCAAGGAACAGGGTAAAATGATGCTGTCAATGCTGTTGAAGGAAAAAAGATTTGTGGTGGTTCTCCAGGAAGATGACATGCTGGAACAGGAAGAGGATGAATTTACTGAAAGCAGTTTTGAAGATTTTGGCCAGGTCTCTTGCGAGGTTCGAATGCCAAGTGGAGTAACTGTTACTGTCAGGATGGCGGACATTTGCAAGCTCAGTGTTGATGCTGTGGTCAATGCTGCTAATGAAGATCTGAAGCACATTGGTGGTTTAGCTTTCGCACTTCTCCAAGCTGCTGGACCACGTCTACAGCATTATTGTGAACATTACATAAAAGAAAATGGGCCTCTGAAACCTGGAGATGCCATCATCACTGACGCTGGTCGTCTTCGCTGTAAATATGTGGTACACGCTGTTGGACCTCGCTTCAGCGATTCAGACCGACGCACCACTGTACAACGCCTGAGACATGCTATAAGGGAAAGCTTGAACAAGGCATCGAGCAAAAACTGCTCCTCCATTGCAATTCCAGTTATTAGTTCAGGGATATTTGGTTGTCCTCTTGAACTTTGCACTGAATCAATTGCCAAGGAAGTGTGTGAGTACATCGAAAATCAAAACCGCAGAGGTTCCAGTAGCACATTAACTGAGATACAGTTGGTTGACAATAATGGCAGCACTGTAAATGCCATGGCTCAAGCTGTCCGAAAGGAGTTTGCTGCTTATAACCCCAAAATTAATTTCCCTCATCAATCCAAACCTCATGGGTATAGTAACGATAGACAAGGCTATCGTGGAAGTGGTCATGGTAGTGGCCGTGGACGTGGACATGGAAACGGCTATCGTGGTCATGGAAATTATGGTCATAGAAACCAAGAGTTTGAAGGTCCCAAAGTCCGTGGTAATAGAGAATTTGAAGGACAAGCACACTCAAGCTCTGGTGGCAGATCAGATACATTTGAAGGATTGAGTGTTCTTGAGACCAAAACTACAAAAGAGGGACTAAAAATCATTCTGAGCAAAGGGAACATCCAGGATGCACGTGCTGATGTCATTGTAAACACTATATCGGAGGACTTGGACCTCAGTAAAGGTGCCGTCTCCAAAGCACTCCTTCAGACTGCTGGTCATCAGCTCCAGTCAGAAATCACCACAGCTGCGCGCTCAAACAATCTAAATTATGGTGAAATGGTCATCACAGATGGTTATAAACTGAAATGTCGAAAAGTCTTCCATGTAGTTTCTCCATTTTGGAAACAAGGCTCAGCAGATAGGGTACTCATTCAGATCATTAGAGATTGCCTGAGAAAAGCAGAAACCCGTGGAATGGCTTCAGTCGTCTTCCCAGCTATCGGTACTGGGAATCTTGGCTTTCCTAAAGATCTCGTGGCCAAAATCATGCTGACAGAATTCCAGGAATTTAACTCTACAAATCTTCGAGAGGTAACTGTGATTGTGCACCCATCTGACAAGGAGAGCATTCAGTGCTTTACCAGCATCTTTAGAAATGGGATCCAGGGTCCCAACACAAAAGGACCAGATCGACTTGCCATGAATAAAACAAATATTTCTGGCAAGTCAGCTCAGACCTCTGGGATTGTTGGCAAAGTCTCCTCTCCCTCTCTTGGGGTGCACACTATGCATCTGGGTCAAGTGACTCTGGAGGTTTCATCTGGAGACATAACTAAAGAAAAAACTGATGCAATTGTCAACTCCTCAAATCCGACATTTTCTCTGAAAGCAGTGGGATCATCAAACATTCAGCAAACAGAGATTGTGACCTCAGCCGGGCACCTGCCATGTGGAAAGATCATCCATATTATTGGACGCAATGGCCCATCTGAAATTAAGGATGTAGTTTTGTCTGTTCTGAAATTGTGCGAGTCACGCCAGATTACTTCTGTCGCCTTCCCAGCTCTTGGCACTGGTCAGGGTGGTGCACCACCAGCTGATGTTGCAGATGCAATGGTTGATGCAGTTGTTGACTTTGTGAAGAAAAAGAAACCTGTGCATGTAAAGTTTGTGAAGTTTCTTATATTCCAGACAAACATGTTGTCAGACTTCCACCAAAGCATGGTCAGAAGATCTGGTGAGAAAGTAGAAGAGGATAAAAGTCTGTTTACCAAAATTAAAGACTATTTTTTGGGGGAAAGTTCAGAATCTCCCAAAAATGATGAGTTTGTGATGGTGGTTGAGGAAATTGAGCCAGCTGTGTTCCAACTGTGTGGAGAGACATCAGAGGACCTGAGGGAAGCCAAGGATATGATCCACAGCTTCATAGTACGGGAGCATATGACCATCCCAATCCATGATCCAGCCATTGCTGATTTCACCAAGGGGGATGCAGAAATGCTTAACTCCATGCAGAGGGAATTCACAGTCAGTATAAAACTTGAGAAGAAAGGCCGAGATTCTGTCGTCACATTGGAAGGCCTGACAAGAGACGTTCACAGTGCAGAGAGACGTATTCGGGACATGATCCGCAAGGTGGAAAGAAATGAAAGCCAAAGACGTGAGGCATTTATAGTCAGCAGTATGGTTAATTGGCAATATCAGGAGAATGGACGCAACCTCAAAAACTTTGATATGTTGACTAATTATGAGCTGGAACAGGCCTATCAGAAGAGACAGCCTTCAGTGAGAATCAAGATTAATAATGATGATTATGAGGCTGATTTATTTCGCAAAGAGGCCACAAGAGGGAGAATGAGGATTGAACTGAACAGAGTAGATCTGAAAGGAGCCATGTATGGGAATGGTACATATTTTGCTGTGGACCCATGTTACTCAGCCCAAGGCTACTCTAAACCTGACGTCAAAGGACATAAACGCATGTATCTCGCCAGGGTGCTTGTCGGTGATTTCACTCAAGGAAAACAAGGCCTTCCTGTTCCCCCTGCGAAGAGCTCCAATAGTGCTGATCTCTATAACAGCGTGACTGACAACATCAACAACCCAACCATGTTTGTGATTTTCCATGATGTACAGGCTTACCCAGAATACCTAATCACCTTCCAGTAATGATTATGAGGTCTCAGTTTCTGTTCAGCTAGTGTTTTTGCTGCTGTTTTACGTTGATTTGGTGTAGCTGAACATACTGCTATGTGCAATTTTTACTGGCAATGTAGACTGTAGGTAGCATCATGCTTATATAAATGACAAAAACTAACAGAACAGTGATTTATCCTGAGAAAGTCTTTGTCCAATTCCCAAAACTTTTAGACTGTCCATTTTATCTTGAGCTGGTTTTCTGAAATTAGCTGCTTAATGTTATGGTTTGCTTCTAATCTTTACTTAGGCTAATCAGCAGATATTTGTTGTCATATATTGAAGAATTGCTTAACAAAGAAAATAGTTTGTGTTGAACATATACAGTATATGGGGATTATGTTTATGTGGATTAAAGGAGCACATTGATTAAAATTAGACATATCATTATGTAACAATAAA

Function


NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
CI01000304_09622805_09640521.mRNA True 5722 mRNA 0.42 16 9622376 9640540

Neighbor


gene id symbol gene type direction distance location
CI01000304_09609674_09619712 NA coding downstream 2346 9609510 ~ 9620030 (-)
CI01000304_09577749_09578512 NA coding downstream 43864 9576119 ~ 9578512 (-)
CI01000304_09566730_09575706 NA coding downstream 46670 9566730 ~ 9575706 (-)
CI01000304_09508090_09519201 NA coding downstream 103043 9507297 ~ 9519333 (-)
CI01000304_09342385_09345935 NA coding downstream 276441 9341854 ~ 9345935 (-)
CI01000304_09699524_09703985 TLX3B coding upstream 58828 9699368 ~ 9706659 (-)
CI01000304_09720695_09725068 UGT5G2 coding upstream 79736 9720276 ~ 9725068 (-)
CI01000304_09726631_09727403 NA coding upstream 85407 9725947 ~ 9730308 (-)
CI01000304_09737662_09738777 NA coding upstream 96686 9736746 ~ 9738777 (-)
CI01000304_09751291_09754997 CLDN7B, CLDX, CLDN7 coding upstream 110381 9750921 ~ 9755245 (-)
G424181 NA non-coding downstream 59287 9562722 ~ 9563089 (-)
G424162 NA non-coding downstream 91052 9529683 ~ 9531324 (-)
G424158 NA non-coding downstream 101975 9520143 ~ 9520401 (-)
G424052 NA non-coding downstream 119065 9499007 ~ 9503311 (-)
G424065 NA non-coding downstream 124783 9471070 ~ 9497593 (-)
G424187 NA non-coding upstream 4957 9645497 ~ 9645723 (-)
G424188 NA non-coding upstream 5274 9645814 ~ 9646065 (-)
G424190 NA non-coding upstream 9121 9649661 ~ 9649877 (-)
G424170 NA non-coding upstream 17790 9658330 ~ 9659287 (-)
G424196 NA non-coding upstream 19043 9659583 ~ 9660325 (-)
G423386 NA other downstream 757080 8862223 ~ 8865296 (-)
G422810 NA other downstream 1969673 7630159 ~ 7652703 (-)
G422378 NA other downstream 2839330 6744679 ~ 6783046 (-)
G422354 NA other downstream 2990877 6631086 ~ 6631499 (-)
CI01000304_10160458_10161768 VAMP2 other upstream 512906 10160458 ~ 10163762 (-)
CI01000304_10191594_10192287 RNASEKB, RNASEK other upstream 550034 10190574 ~ 10192357 (-)
G424808 NA other upstream 803815 10444355 ~ 10542665 (-)
CI01000304_11338304_11348212 ILK other upstream 1706480 11338019 ~ 11348212 (-)

Expression



Co-expression Network