CI01000304_13578347_13595075


Basic Information

Item Value
gene id CI01000304_13578347_13595075
gene name NA
gene type misc
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000304
NCBI id null
chromosome length 18613800
location 13578049 ~ 13595097 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000304_13578347_13595075.mRNA
GTATAAATCTCACTCCTGTCAAACTCCGCCAGGGCATTTTCAGAGAGAGATACCCCTCCACAAGCTTTCATTACTTAAACTAGGGGTTTTCAGGGCAGACTTTTCAGATGAGACGGTTTTGTGCTCGGGTTTCTCGCTCCGTTCAGTCAGATAGAATAAAAGTAGCTGGCTAGCCTGCTAGCCCCTGTGATGCGAGATTGCTCTAGCTCGCCTGAACGTGTCATTAGCAGACCCATATGCAATAATCGCACAGTCGGTCGTACATGTTAAAATCGTCGTGAATTTCACAGAAACCCTGATGTTCGGTGAGAGCAGGTGTCAAACACGCCTAACACCAAAGTTGTTTATGCCGAAGCACAACAAACTGGCACGTATTTCGCACTGTCTAAGCGAGAGCTCCCGATCAATCGGAACTCGGGGCTTTTCGCAAACAAAATATGTCCAAGTTTTCAGTCATCGCGGCATATGTGAAAGCAAACTTACCCCTGAAATCCAGTCGAAACGCCAGGGCCTTCTCATTCCAGCCTCAAACTTATTGACACATCAGAACAGTTATGCACTGGCCGTCCGTACAGTAGCCCCACAGACACTTATATTATTTTTACCGGATGCTTGGAATGGAGCGACACCTCAGCGTGAAGTCGACAAAACTACATCACAATCGCGCCGATCACTCCGAAAACGAGTAACGCTGGTTGACCAAATATCAGCTTTACTACCTTATGAGGAGCTGAGGATGACACGACCATACTGGGAATGCTTTTCTGATTCAGATCCACTATCTCTAGAGCTTCCTGGATGTTGTATATTAGTGTCAGATCGGCGTTGCGCTGATCAATGGCAAAAGGCACAAGAGTTGTCCTGCCCTTTGGCCTCAGAAGATAAGGAGAAGAGAATCCATTCATCTCACGCAGGGGGCAGCTGGCATTTATGGCAGGGGAGAAGAGAGGGGAAAGCTAGTGGGCAGAGAGATTTGAAATGGAGATTCTCTGTGTGTGCGTCTCTCTTTCTGCTCCCCTGGCGTCCCGTTTATCTGACACTAACGAGCTTCAGAGCCATTGAAGTAGACACAGTCCCTCTTTACTTACTGTGTTACATTACATCTCATTTTCGCATCCTGATGAAGTCATTGACTATGCAAAACACTAGCGTTGCGTCAAGATATGAGACATTTTTGGATACTATGCCAGGAAGTGGCTTTGCTGAAAACGCCAGTTTTGTTGAGTTGTTTGAGCTTTACCGAGGTCAGCTCACAGCCATGTCAACACTGCCATTTAACAAAAGACCACTGACAGGAGATCAGACACTCATCCCAGAAAAGATCATTTACATGGTCCGGCGTGACATTTACACTGATGAAAAACACAGGGTGCTTCGAGTCACTTTTGATTACATGATACCCAGATGGTCTTTTAGGACTCTTGTTTAGTGAACTTAGACGCTCTGTAATA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000304_13578347_13595075.mRNA False 1451 mRNA 0.46 7 13578049 13595097

Neighbor

gene id symbol gene type direction distance location
CI01000304_13435609_13438459 PTRH2 coding upstream 139319 13435507 ~ 13438730 (+)
CI01000304_13331382_13338351 RNFT1 coding upstream 238801 13331382 ~ 13339248 (+)
CI01000304_12828251_12839287 NA coding upstream 738058 12827314 ~ 12839991 (+)
CI01000304_12819247_12825161 NA coding upstream 752736 12817979 ~ 12825313 (+)
CI01000304_12744525_12773999 NA coding upstream 803737 12744059 ~ 12774312 (+)
CI01000304_13613026_13686604 CBLB coding downstream 17929 13613026 ~ 13686604 (+)
CI01000304_13731299_13731640 NA coding downstream 136145 13731242 ~ 13731650 (+)
CI01000304_13744571_13748279 NA coding downstream 148578 13743675 ~ 13748318 (+)
CI01000304_13932457_13932762 NA coding downstream 336852 13931949 ~ 13933084 (+)
CI01000304_13947668_13967998 PICALMA, PICALM, PICA coding downstream 351061 13946158 ~ 13969190 (+)
G426512 NA non-coding upstream 3023 13574511 ~ 13575026 (+)
G426380 NA non-coding upstream 27966 13546562 ~ 13550083 (+)
G426360 NA non-coding upstream 44968 13519424 ~ 13533081 (+)
G426369 NA non-coding upstream 52111 13519885 ~ 13525938 (+)
G426498 NA non-coding upstream 62217 13514906 ~ 13515832 (+)
G426377 NA non-coding downstream 20890 13615987 ~ 13618730 (+)
G426348 NA non-coding downstream 85528 13680625 ~ 13689596 (+)
G426526 NA non-coding downstream 144603 13739700 ~ 13741560 (+)
G426592 NA non-coding downstream 277808 13872905 ~ 13873118 (+)
G426307 NA non-coding downstream 381868 13976965 ~ 13978162 (+)
G425718 NA other upstream 1138963 12436554 ~ 12436605 (+)
CI01000304_10555326_10571933 NA other upstream 3022345 10555216 ~ 10572164 (+)
G424251 NA other upstream 3385154 10188822 ~ 10189404 (+)
G424246 NA other upstream 3450727 10116343 ~ 10127322 (+)
CI01000304_09564068_09565679 HRH2B other upstream 4012476 9561005 ~ 9565778 (+)
G426312 NA other downstream 734951 14330048 ~ 14330886 (+)
G426828 NA other downstream 1353793 14948890 ~ 14950592 (+)
G427860 NA other downstream 2290357 15885454 ~ 15889591 (+)
G428017 NA other downstream 2488133 16083230 ~ 16083714 (+)
CI01000304_16505174_16506124 NA other downstream 2909765 16504764 ~ 16513625 (+)
G426497 NA non-coding upstream 51309 13504792 ~ 13505142 (+)
G426518 NA non-coding downstream 1990 13580837 ~ 13581043 (+)

Expression


Co-expression Network