CI01000304_14286960_14294449


Basic Information

Item Value
gene id CI01000304_14286960_14294449
gene name NA
gene type misc
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000304
NCBI id null
chromosome length 18613800
location 14286960 ~ 14294449 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000304_14286960_14294449.mRNA
TGGTTCTCACGCACTTCCGCTGAACATCTCGCGAGAACAAGTTTCCCTGGCAACAATACACGGTGTTTTCATGGAGAGGTCTGAGCGACAAAAGATTCAACTCGCAACCAACCAGCCATACGACGAGAGTTTTGAGGTGAACGCAGACGAGGCGGCCAGCGTTCACACACCATCCCCCCGACAGACAGTGTCCAGGAGGGCAGGCAGGCAGAAGCAGAGCGCCATGGCCAGTTATGCTGGTGAGAAACTAGAAGAGGACACTAAAGTAAGATTAAATGCATATGACCCGGCCGATTATGAACATCTTCCTGTCACAGCCGAGATCAAAGAGCTGTTTCAGTACATTACACGATACACTCCTCAGACGATAGAGCTTGACCACAAACTGAAGCCCTTTATCCCTGATTTCATCCCAGCTGTGGGAGACATTGATGCTTTCCTCAAAGTGCCACGGGCAGATGGGAAGGCTGACAATCTGGGTCTGCTCGTTCTAGATGAGCCATGCGTTAAACAGTCAGACCCAACAGTGCTTTCCTTGTGGCTGTCAGAGAACAGCAAACAACACAATGTCGCTGAAGTGAAAGTTAAGAGCATCGAAAACCCGGAGAAGAACCCCAAAGCCATAGACAACTGGATCGAGAGCATTACTGAGCTGCATCGGTCCAAACCTCCAGCTACCGTGAATCTCCCCACAGCAGACATCGACTGTGATTTGGCAGATTATGTTGATATTATTTGTGGAATCCTGGACATCCCTGTGTACAAGAACCGAATTCACTCACTTCACGTCCTGTTCACACTCTACTCTGAATTCAAAAACTCACAGGTGAGAACTCAACTGCTAACCAAGGAAATGGCACTAGTGGTAAAACTCAGTCTGGTCAGAATCTGCTTTCAAGTGGACTTACACTCATGGGTGTTGCTGGATTGTGCATCATGTTCTACAGCCTTTACAAATACCATCACAAATTATATTCTATTTTGTACAGGGCAAAGAGCAGAAAATAGCAGAACTACAGATGAAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000304_14286960_14294449.mRNA False 1025 mRNA 0.47 11 14286960 14294449

Neighbor

gene id symbol gene type direction distance location
CI01000304_14271696_14274827 NA coding downstream 10918 14271253 ~ 14276042 (-)
CI01000304_14265881_14269102 NA coding downstream 17467 14265476 ~ 14269571 (-)
CI01000304_14223930_14229132 NA coding downstream 57794 14223167 ~ 14229166 (-)
CI01000304_14009988_14011059 TMEM126A coding downstream 275791 14009862 ~ 14011169 (-)
CI01000304_13979830_13985175 NA coding downstream 301371 13979790 ~ 13985589 (-)
CI01000304_14296254_14303852 VPS11 coding upstream 1346 14295795 ~ 14303882 (-)
CI01000304_14318806_14323940 NA coding upstream 24190 14318639 ~ 14324782 (-)
CI01000304_14330462_14330842 NA coding upstream 35630 14330079 ~ 14330892 (-)
CI01000304_14333374_14339329 ZPR1 coding upstream 38733 14333182 ~ 14340118 (-)
CI01000304_14377465_14379055 BSX coding upstream 82083 14376532 ~ 14379055 (-)
G427309 NA non-coding downstream 49882 14181932 ~ 14237078 (-)
G427318 NA non-coding downstream 83969 14202337 ~ 14202991 (-)
G427225 NA non-coding downstream 202585 14082375 ~ 14084375 (-)
G427174 NA non-coding downstream 308804 13976939 ~ 13978156 (-)
G427155 NA non-coding downstream 327336 13957659 ~ 13959624 (-)
G427345 NA non-coding upstream 10768 14305217 ~ 14318043 (-)
G427341 NA non-coding upstream 36624 14331073 ~ 14332400 (-)
G427342 NA non-coding upstream 57483 14351932 ~ 14355810 (-)
G427424 NA non-coding upstream 69572 14364021 ~ 14364315 (-)
G427434 NA non-coding upstream 101095 14395544 ~ 14395824 (-)
G427154 NA other downstream 336412 13931791 ~ 13950548 (-)
G427057 NA other downstream 779038 13507641 ~ 13507922 (-)
G426147 NA other downstream 1247645 12719497 ~ 12805926 (-)
G427423 NA other upstream 66999 14361448 ~ 14361892 (-)
G427376 NA other upstream 964515 15258964 ~ 15261405 (-)
CI01000304_16769537_16780398 SUPT20, SUPT20H other upstream 2484915 16769417 ~ 16780398 (-)
CI01000304_16854877_16860888 YPEL2A, YPEL2B, YPEL1, YPEL2, YPEL1.L, YPELD, YPELC other upstream 2560116 16854565 ~ 16860911 (-)
G429331 NA other upstream 3629414 17923863 ~ 17924684 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
bowfin (Amia calva) AMCG00004358 NA coding CM030121.1 CM030121.1 44591677 ~ 44604309 (-)