G427174


Basic Information

Item Value
gene id G427174
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000304
NCBI id null
chromosome length 18613800
location 13976939 ~ 13978156 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU490495
GGAAGATGCACTTTATTTGAAAACCACCCAAATTCTGCTTCATTTTTTTGTCATAAACAAAATAGAATCTGCAGGGATGATGCAGTAAATATGCTAAATCAATGGATAGAATCGCCCTCATATTCGGACCACCCTTTGTGTATTTCCCTACTGGACAGGGCCTGTTTTATGTACATGGAGCACTGATCAACAGCGCCCCCTTTCTTCACTCTACTGGACCTACAGCTAGACACTACCGACCCAATCCGATGCCGACAGCAACCTGCGATTCTCACTCACATTTACACACTCACACCCACAAACACACACGCAACTGCTCTTGGATGGCCCGAAAACGAAGGCGACTCTGCACATTCAGGTTGAAAAGGCAGCCATATAACTGTCAAATGTAAAAATGACATGCCAAGCAGAAAGCAATACAGATCTTCCCCAAATGCAATGCCGCTGAATCACAAATGTAGTGCTTTGCTAAATGCTCCCTCACGAAACCCACCCCCACCCCCACCCGGGGCACAGAACTGACTATGTGGAATAACGATTTTTTGTATATTTTATCCTATGTCCATTACAAATGAAGGGCGGTGAGCGTTTGAGCAACAAAGAAATTGCACTAGACATACAACTGCTTCTGAGAATACTTAGTGCTGTATCAGTCAGTTTATAAGTGTCCATTTCCCCCCATTTTTTATATTATATATATATTTTTTCATAATTCAGTCATTCAAATCCGAATTATACAACCAATCATACCCATATGAATGCATAATTCGAAACACCTCCGTAAGGAAGAGCTCAAAAGAAAAAAAAAAAAAAAAAAAAAAAGATTATTCATTTCTTTCATGTCCTCAGTGGGTAAATCATAAATAAATACAGACAATACACAAGGAATGTCTACTGCAAATGTCATAACATAAAAAATAAAAATAAAATAGAAATAATAGAAACCAATGTTAGAATTTCGAATTGGAGAAGGTTAAATCAGGTATTGCTTGATTGATGATCGGATAAAGACAGAACTCCACCCAAATCCCGATCCCTCGGTTTGCCATTTCATGGAAAAAAGTGAAGCCATGTTTGTGTGAAAACCCACTACATTCCTGCACTCACGCTCTCTCAACACCCTTGTGTTTCGTTACAGACACAGAGCGGTACAATAACCGCGTTAGACAAATTACAAAATGAGCGCGTGTCCTCCATATCTGGGCAACAGAGTCTTAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU490495 True 1218 lncRNA 0.40 1 13976939 13978156

Neighbor

gene id symbol gene type direction distance location
CI01000304_13914502_13920992 ZPLD1 coding downstream 55947 13913987 ~ 13920992 (-)
CI01000304_13903994_13909017 NA coding downstream 67922 13903716 ~ 13909017 (-)
CI01000304_13741930_13742220 NA coding downstream 234071 13741694 ~ 13742868 (-)
CI01000304_13692322_13711234 ALCAMA coding downstream 265705 13691958 ~ 13711234 (-)
CI01000304_13541959_13564807 NA coding downstream 412132 13541225 ~ 13564807 (-)
CI01000304_13979830_13985175 NA coding upstream 1634 13979790 ~ 13985589 (-)
CI01000304_14009988_14011059 TMEM126A coding upstream 31706 14009862 ~ 14011169 (-)
CI01000304_14223930_14229132 NA coding upstream 245011 14223167 ~ 14229166 (-)
CI01000304_14265881_14269102 NA coding upstream 287320 14265476 ~ 14269571 (-)
CI01000304_14271696_14274827 NA coding upstream 293097 14271253 ~ 14276042 (-)
G427155 NA non-coding downstream 17315 13957659 ~ 13959624 (-)
G427154 NA non-coding downstream 38297 13931791 ~ 13950548 (-)
G427144 NA non-coding downstream 106894 13869788 ~ 13870045 (-)
G427136 NA non-coding downstream 172211 13804466 ~ 13804728 (-)
G427130 NA non-coding downstream 194901 13781805 ~ 13782038 (-)
G427225 NA non-coding upstream 104219 14082375 ~ 14084375 (-)
G427309 NA non-coding upstream 203776 14181932 ~ 14237078 (-)
G427318 NA non-coding upstream 224181 14202337 ~ 14202991 (-)
G427345 NA non-coding upstream 327061 14305217 ~ 14318043 (-)
G427341 NA non-coding upstream 352917 14331073 ~ 14332400 (-)
G427057 NA other downstream 469017 13507641 ~ 13507922 (-)
G426147 NA other downstream 937624 12719497 ~ 12805926 (-)
CI01000304_12559311_12559998 NA other downstream 1416804 12558854 ~ 12560135 (-)
G426106 NA other downstream 1636711 12336701 ~ 12340228 (-)
CI01000304_14286960_14294449 NA other upstream 305515 14286960 ~ 14294449 (-)
G427423 NA other upstream 383292 14361448 ~ 14361892 (-)
G427376 NA other upstream 1280808 15258964 ~ 15261405 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location