CI01000306_08521837_08523740


Basic Information

Item Value
gene id CI01000306_08521837_08523740
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000306
NCBI id null
chromosome length 11491657
location 8521033 ~ 8523770 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000306_08521837_08523740.mRNA
ATTAAATTTTAAAAAGCAGCCAAACAGAGCATGGGAAATGGGACTGCCTACACAAAACCTGGTACAAAGATCCTTACCAGTTTGCGCTTTTTCAACTTTTATACGAAATCAAAGACAGAAAAACAAATAACATCTCAAAGTCTCAGGGTAGATAGAACAAATAAAGTCCTGACCTTCCCGCCCTTCCAGAATGACGTCACTATTGTCAACTTCAGTGGAGGACAGGCCAATCAGAAATTGAGTGTTCACATGGACACCGACATTGAGTAGCATCACAGTATCACAGTTGTAGACTATTGCTCATATTAAGAGGTCGACGTTTCGATTTTGCTTTCGTTAAGCTCTTGTAATCCTACATCACCTGCCGTTTCTCTGTGCTAAAATATGTTTGTATACTGAAAACAAAGCAAACTATTCAGGTAAAAATTAAGATGGCACAAAATGAGTTTTTAGAATGCGTCAACTAAGTACTGGCAATATGAGTAACAGACATGTCTACAGCAGTAAACTCCACACACTAGTGAAGCATGATCGTTTAATGAGAGAGAGCTGTAAAAAAATTGATTGTGAAAGATTGGATGTCTGTTGCTGACAGCAGACATTTCTATAAAATAAGTAAAAGGCAAAAAAAGCTATAATGTAAAATGTTTAATCATTAGGGTAAGGGTTTAATTAATAGGGCTAGACAATGGTTGGAAAATTCTGAAAAGTAATTCCATTGGTCTCATTCCTCTGTGTCATTGTAATTGTGGTGTGTACTTCCCTACTGTTACAGAATTAGAAAGATTATTAAAACATTCTAGTTATCATCCTTGATGTGAAGAGGCCTTTAATGTCCCTGGAAACCTCTGTAGTCCCATTTAGCAACCGCATTTAATTTGTGGTATTACTGATATATTTTAGATTGTACAATAGAATGTCAAAATATCTTGTTAACCACAGACCTTATTTCAGGCATGTAACCAAAAACCCATTAAAAAACATTGATTTGGGGATGATGGAACCTGAAATGCAAAAATGCTAACTTGTTACTTGGTTTTAGGACTCCTGCAGCACTCTATATTTGTCAATAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000306_08521837_08523740.mRNA True 1074 mRNA 0.36 3 8521033 8523770

Neighbor

gene id symbol gene type direction distance location
CI01000306_08349295_08353547 TRAIP coding downstream 167486 8349156 ~ 8353547 (-)
CI01000306_08208426_08210350 NA coding downstream 310663 8208224 ~ 8210370 (-)
CI01000306_08143309_08144833 CHCHD4, CHCHD4A coding downstream 374633 8143139 ~ 8146400 (-)
CI01000306_08077693_08108117 DNAH1 coding downstream 412916 8077609 ~ 8108117 (-)
CI01000306_08061250_08076179 MAPKAPK3 coding downstream 444854 8061250 ~ 8076179 (-)
CI01000306_08533490_08558727 SEMA3FB, SEMA3F coding upstream 9658 8533428 ~ 8559154 (-)
CI01000306_08596204_08597372 NA coding upstream 72105 8595875 ~ 8598404 (-)
CI01000306_08690665_08696165 ARL8BA, ARL8B, ARL8BB, ARL8A coding upstream 166895 8690665 ~ 8696165 (-)
CI01000306_08699884_08701812 BHLHE40 coding upstream 174799 8698569 ~ 8703451 (-)
CI01000306_08710919_08824478 ITPR1 coding upstream 185834 8709604 ~ 8824478 (-)
G436211 NA non-coding downstream 52433 8468362 ~ 8468600 (-)
G436198 NA non-coding downstream 77826 8442991 ~ 8443207 (-)
G436193 NA non-coding downstream 90659 8429759 ~ 8430374 (-)
G436180 NA non-coding downstream 109099 8404724 ~ 8411934 (-)
G436182 NA non-coding downstream 119085 8399564 ~ 8401948 (-)
G436337 NA non-coding upstream 302834 8826604 ~ 8827451 (-)
CI01000306_08864809_08865809 BRK1, BRK1.S, BRK1.L non-coding upstream 340297 8864794 ~ 8866213 (-)
G436383 NA non-coding upstream 397844 8921614 ~ 8921940 (-)
G436386 NA non-coding upstream 399800 8923570 ~ 8923780 (-)
G434338 NA other downstream 1654097 6866656 ~ 6866936 (-)
G434086 NA other downstream 2068782 6437406 ~ 6452251 (-)
G434016 NA other downstream 2159390 6355180 ~ 6361643 (-)
G433985 NA other downstream 2323823 6196107 ~ 6197210 (-)
G433670 NA other downstream 2479750 6041014 ~ 6041283 (-)
G436446 NA other upstream 1132509 9656279 ~ 9671776 (-)
G436626 NA other upstream 1311255 9835025 ~ 9836323 (-)
G436643 NA other upstream 1498378 10022148 ~ 10025375 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_004255 NA non-coding NC_007122.7 CM002895.2 35438013 ~ 35441417 (-)