G436311


Basic Information

Item Value
gene id G436311
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000306
NCBI id null
chromosome length 11491657
location 9098472 ~ 9103121 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU500846
GTTGCTTTAATTATTAGAGCAGCTCTGTTTCCCGTCATTGATTTAAAAACTTGAAAACTGTGATTTATAAAACTTAAAACAAGTTATAATAAAATGAAAGTACACTTTTAAGTAAAAAGTTAATATGGTATGTAGCCCATTGCTATTGTGTGCGCAGTCAAAACTTATACAGTCAAAATCCCAGTAAATTTTGTTGACCCAGTCGAAATTTATACAGGATTTTTTTTCAGGATTTTTTTGATTAAATTCATCCTTGCTGAATGAAAGTATTAATTTCTTTCAAAAAAAAAAAACTGTGTGAATGTATGTATTTGGCTTATACAAAACTGACCACACTAGAAACACAGCTAGTGAATGTATTTGAATTGTTAATTTGAACATTTCCTTTCACATAACCAATGATGCAAACTCAGTTTGTAAAAAGTAATTAGGTCTTTGTTTTAATCACAAAAACATAAAGATCTCCTTTTGATTTTGACGCATGAGCTATTACTTAATCCAACAGCAAACAATACAAGATAGGCCTTTTTGTACAAATTTGTACCAACTTTTTGTATTTTAATTCCCATGAGATCCTATGACCAGAAAACTTGTTTATATGATTATTCAGCAATTCAAAATTTTACTAATTAATCTGAAAAAAACAAAAAACAAACAAACAAAAGGAAGTGGAGATTTTAGATATTACTTTGAAGAACACAAAAAAGGACAAAAAAAAATGCAAAAAATATCTCATTCTTAGAACAAAGATTCAAAAAGATTCAAAAAACTTTATAGAACCCTTTATGGTAAAAAAAAATTGAGAAATATGAGAAAACCTTTTCTTCTAAGAGTGAAAGTGAAAATGAGGTGCTTTAAATGATGAACATCAGGTGAAAGTATCTACAGAGTCATGCAAAAGGACAAAATATGAGTGTCTTTGGCATGTAACAATGGGCCTTGTGCATTCTAAAAAATAACTGTAAAAAAACAAAACAAATTTACATAGTAAATTGCCATTTTCCATTGAAACAGTAATATACCTTAAAACAATGTATTCTGGGTAATATTACTTGTCGTTTACACGAAAGTAACCTTTAGGATACTTTCTCATAAATGACTAATATTACCCAGAATGCATTGTTTTTACACTATATTACTTCTGTATATTACAATGCATTCTGTATATTAAAATGCATTCTGGGTAATATTATGTGTCGTTTTCAAGAAAGTAGCCTATAGCACTCTTTTCTTAAAATGACAAATATTACCCAGAATGCATT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU500846 True 1262 lncRNA 0.28 2 9098472 9103121

Neighbor

gene id symbol gene type direction distance location
CI01000306_09067901_09077320 USP48 coding downstream 20459 9067235 ~ 9078013 (-)
CI01000306_09054500_09064951 NA coding downstream 33521 9054169 ~ 9064951 (-)
CI01000306_09017460_09019520 PSMA5 coding downstream 78603 9017002 ~ 9019869 (-)
CI01000306_09013366_09014513 PSMA5 coding downstream 83959 9013071 ~ 9014513 (-)
CI01000306_08986353_09011689 SORT1A coding downstream 86347 8985405 ~ 9012125 (-)
CI01000306_09290422_09292579 NA coding upstream 186983 9290104 ~ 9292819 (-)
CI01000306_09309973_09348444 CACNA2D3 coding upstream 206852 9309973 ~ 9348444 (-)
CI01000306_09374084_09380300 NA coding upstream 270166 9373287 ~ 9380506 (-)
CI01000306_09381571_09461159 CACNA1DA, CACNA1D coding upstream 278066 9381187 ~ 9461573 (-)
CI01000306_09522093_09523814 NINJ1 coding upstream 418912 9522033 ~ 9525553 (-)
G436405 NA non-coding downstream 7646 9090130 ~ 9090826 (-)
G436308 NA non-coding downstream 124994 8973028 ~ 8973478 (-)
G436319 NA non-coding downstream 127850 8965702 ~ 8970622 (-)
G436386 NA non-coding downstream 174692 8923570 ~ 8923780 (-)
G436383 NA non-coding downstream 176532 8921614 ~ 8921940 (-)
G436413 NA non-coding upstream 13653 9116774 ~ 9117062 (-)
G436415 NA non-coding upstream 17506 9120627 ~ 9120991 (-)
G436426 NA non-coding upstream 100938 9204059 ~ 9251009 (-)
G436555 NA non-coding upstream 152325 9255446 ~ 9260573 (-)
G436495 NA non-coding upstream 183039 9286160 ~ 9288190 (-)
G434338 NA other downstream 2231536 6866656 ~ 6866936 (-)
G434086 NA other downstream 2646221 6437406 ~ 6452251 (-)
G434016 NA other downstream 2736829 6355180 ~ 6361643 (-)
G433985 NA other downstream 2901262 6196107 ~ 6197210 (-)
G433670 NA other downstream 3057189 6041014 ~ 6041283 (-)
G436446 NA other upstream 553158 9656279 ~ 9671776 (-)
G436626 NA other upstream 731904 9835025 ~ 9836323 (-)
G436643 NA other upstream 919027 10022148 ~ 10025375 (-)

Expression


Co-expression Network