CI01000314_01596442_01616381


Basic Information

Item Value
gene id CI01000314_01596442_01616381
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000314
NCBI id null
chromosome length 1736912
location 1595831 ~ 1616381 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000314_01596442_01616381.mRNA
ATGGCGGAGGAGGAGGGCAGCGCGACTGAGGCTGTGGCCCTCAGACAGAAATTTCAGGATCTCATCTCCGAATTAAAAAGGAGCTCCGAGTCGACGCTAGATGCCTCCAATAGTTTTTGTCAGGATTTCTGTCAAGTTTTGATGCAGCATGGATGTCAGTGGAGACCAGATGAAGATCCACTTCCTCTGTTGGAGATGTACACGGTAGCTATAATGTGTTGCGCTGAGGCTAGCCCGTTCCTCAGCCCTGAATGTGAACACGTAACAGATGTGCTGGACAAGTTATCATGGAGCTGTCTGAATCTTCTGTTGTCATTCTCTGAGAAAATCCCTGGTGCCTTATGGGAAGAGTTTCAATCTTCTGTCAAGGTCAGAGACAAGACATTAAATGTTTTTATTAACACAAAGATGGCTCATGACATCCTTCAGGCACATGGAAACGCGCAGCTTCACACCCTGTTGACTCTAGTGGAGGAGAATGGTGTGTGGTCCAACGCCACGCTGTGTAGCCTTCTCTCAAGTGACACCGTTAATGTAGAGAAAGTACATGAGTTTTTATCTCGAGAAGGACCTGAACTACTTCATATGCGTATAAAGCACCTCATCAAACAGAAGCGTATGGATAAAGCTGCAATACTAGCAAAGATATGCGCGGAGTTTCCTGAATTTGGAGGAAAGAAGAACTTTAAACAAATCTACCTCGTATGTCTGTGTGAAATAAAGCCACAACAAGAACTTATGCAAGAGATAAAGGAGATAGACTGTAAGGAGGCTCTGGACATGATTTGTAACTTGGAGTCTGAGGAAGATGAGAAGGGAGCTCTCAGTCTTTGTACGGCATTTTTCAAGCGCCAGCTTCTCAGCGGGGATGCTTATTGTGCCTGGGAGCTGACACTGTTTTGGAGTAAACTTCTAATACGGCTTGAATCAAAACAGGCCTTTTTGGAGCAATGCAGACTGTTAGCACGCCTCTCCGTGAGTGTGTACCATATTCTGCTCCTCATCAAAGTCATTCAGGCGGAGGTTGAGAAAAATGGACTCTCAGTGTGCATCGAAATGTGCATTCAAGCACTAAAAATGGGAGTTGATGATAACGAGGGCTGTAATATCAGTATCTGCAAAACAATCTCTTGTTTGCTGCCTTTAGACTTGGAAGTAAAACGGGCTTGTCAACTCACTGAGTTCCTGATAAATCCGTCTTTGGACTCTTACTATGCTGTTGAGACTCTTTTTAATGAGCCTGACCAAAAGCTTGAGCAGGAGGATCCACCAATTCTGAACTCACTACGCTGTGACGTGTTGTTGGCCTTAAAGACGAAGTGGCCTTTTGATCCGGAGTTCTGGGACTGGAAAACTCTAAAACGTCAATGCCTTGCTTTGATGGGTCAGGAAGCAACAGCTATATTGTCTACTGACAAATGTACTGACAGTGAAGACAATGAAGTCCATGACCATGATGAAAAATATTTCCAACATCTACATTTTATTGATAGTCCTAATTACGAGCTCAGTGAAGTTGAAGCAGAAAGAAAGAAGAAAAGGGAAATGAAGAAGATGAGAGAGATGGGATTTGTTTCTGCTCGATTCCGCAATTGGCAAGCTTATATGCAATATTGTGTTTTGTGTGACAAAGAGTTCCTTGGACACAGGATTGTGAAGCATGCATTGAAGCATGTTCAAGATGGGATTTTCCGTTGCCCAATATGTACTAAAACGTTTGAAACGAGGGTAGTTCTAGAGCCTCATGTGGCATCACATGTGAAACAGTCATGTAAGGAACGCCTTGCTGCTATGGGTGTGAGCAAGAAACGTCCCAGTTTAGACACCAAGTTGGCAGCAGCTAGCAGTACCTTGAAAAAAGAAGAGCACTACATCAAAACTGAAAAAGTTAGCCAAGGGACAATTAGCAATAACAGTGTATATGCTTCAAACGGTAGTCCCAGCACAAATGTAAAAAGTAAAATTAAAGTGTCATCCCCCAAACAGGGCAACCCTATTCGTGATGTTACCAACACTGAACAGTGTTCGTGCCCTGTTACAAGCTGTCAAAAAGTTTTCAAGTACTTCAGGAATTTGGTTGCACACGTTAAGGCCCACAAAAACGAGCAGGAAGCAACACAATTCCTAGAAATACAGAGCCAGAAGGCTATGTGCCAGTATTGTCACCGTCAGTTTGTTAATGTGACCCATCTTAACGATCACTTACAGATGCATTGTGGCGAGAAGCCGTATTTTTGCATTCAGCTCGGATGTAATTGCAGCTTTTCCTCTCATGCTGAGCTTCAGATACACAGAAAAGTACACGCTGAATTTCAGGCACAGTGTGCATATCCAAACTGTGAGAGAATATTCAACGAGACTTACTTGCTGTATGATCATGAAGCACAGCACTACGTGACGTTCTCCTGCAAAAGTCATAACTGTGACAAGGTGTTCTACACCCTGTCTGAGCTGGATCTGCATCAGAAAGGACATGCAAAGCAGAAGGACCACTCTTCTGTTGAAGGGGGCTCACCTTCTCAACTTGAAGTACTAACTCCGACTATTCCTGCCTTAGAGCTGCCTCCAAGCCAAATTAAAGAGGTTTCTCAAGAGGTTACCCCAGTAGAAAGTAAATGCACAGTTGAAAGCATTGCAGACAATACTCAAGATCCCACAGAAAAGCCTGAGCCTCCTGTATCATGCACATCCCAGTTGACATTGAACGAAAATGATTCCCAAACTAATCTTGTTCAGCCTGATGAATCTGAGACGCCTCTTTGTCCTGAAAGTACAAAGCAATCGCATCTTGAATCTTGCTATGTAAAACTGGAGCCTATTCCCATCAAGAGCAATGATCCAATGTATTTAGATGCTGTAAAGAATGCCGACAGTGAAACTCAAACACTCTTGAAAGATAAGAAATTGTTTTCTTTCCCATGGAGTCAGCTTAAGCCTTCCACATTGAAGTCGCCTCCCTCTGTGACAAAAGCCAACAGAGAAGAAGGTCTGAATCATGTGTGTCCATTCGAAACCTGCACACGGAAATACAGCACCTCCAAAAGTTTATCGAGACATGTCAAAAATGTTCATTCGGAGGCTTTTGAGGAGTGGAAGTTGTCTAAGAAGTACAAAAGGATTGCAGAAATTGCTGCAAAAAAGTCGTCGTCTGGGCACACAACCACTAGTTCTCGGATTGTGAAATGGACAAATCGTTCCAAACAAACTGAACATACTACACTTCTGGACTCGGTGATTGAAAGTCCTTCCTCTGTTTTCTCCAGTCACGATAGTATGCAGCCCATAAGTGCCAAGTTTTGCTCTCAGCTTGAAAACACTCAAAGTGCAACATCAAACCAGACAGATCTGATGCAATTACCAATAAATCAGACATGGGCAACGCCTTCAATGGAGAATTTGGATTCAGGTTTTTCTGTACATCCTTACCGCTCTACAATTTTATCTGAGAACCAGCACACAACCCCATCATACCATTCTGACACAGTCTTAGATTACGCAACTGCCTCATCTTATGATGACATCGTCCCCCTTTCTGCGAATCCCCACACACCCTCAAGTGTGATGAACGAAGCCTCAAAATATGTGTCAAGCTCTCTTAGAGTACTGCATGCCCTCAACAGTGAGCAGACTTGTGACCTGTCACAGGTTGAGTCAAGCGTTAATCTTGGATTCAGTCGGATTGGACAAAACCATCTCACTGATATTTCCGTCAGTACTTTGTCTGGGCAGAACGGCAGCCTATATTTTCCAACCATGCCTTCAGAGGCAGGTCCTGTTTCAGTGCAGTCATTGGAAAATTCAAACAAAGAAATCAGCACTGATGGTACTGATGCATTACTCTCATCAGATGTCAAACATATGTTGAATCCTTTAACCCCTCATTTTAAGGAATCATCAGAAGATTTCTTTAGTGCTGCCCCCCTGACTGGTGAGAAAAGTCCAGAAGATTTTTGTAATCATGAATTGTCGCAGGAAGGAACAGAAGGAATCACTTCAGATGATCAGAATGTTTCAGGTTCTGGTGAAACTAGGAAATCCAAAAAAATTAAAACATCTAAGAGAACAAAATGGCCTGCCATAATACAGGATGGGAAAGTCATTTGTTGCAGGTGCTACAGAGAGTTTTCAAGCACAAAGTCACTTGGAGGTCATTTATCAAAACGTTCCCAGTGCAAAACTGTAGATGAAATTGATCTTACTGGTGATTTACCAGTATCATTTCTTGATTTTCTGAATGATCCTGATATTTCAATGGCACAAATGCCTCTCCCCATGAATGACGTACTTGAGGACGCTCACAAATCCTGCGTCTATGCACCATCAGAATCCAACACCTTTAACAGTAACACTTTAACAAGCATGCATGGTGGCACGGATAGCATCCAGAACACTAATATGTCCTCTCAAGACCCCTCTGAAATGACTAGAAATTACAGTTTCTTCCATCCACCTGTATCAAACACTGGCAAAGACATCAAACCCGAAGCTGTAATCATATCTGCAAATACTGGTGAAGATGGCAAAATCATGGAAATTGAAAGGGCATTACAACGTCTTGATTTAGTTGATATACTCAGTCGAGACAAATCTGAGATCAAATCTCAGAGCACTAACCTGCACGATCAGAGCTCTAAAGCTGTCATCAGTAATGATCAGTGTCACACAATTGAAGATCCTGAACAAAACGAGCAGAAATGTGTTTTAAAGCCTTTTAGATGTGAAGAAGGCTGTGTTTATGGAGCAATGACAAAGGAAGCTTTATTTAAACACCTTAGCCGTGTACATGACTACAGTGAGGACAGGATAAATCAAATGAAGAAAAACCCTGACAAATTTGCTCCATACAGCTGCCATTTATGTTCAAAGACATTTACCAGAACCACAGGCCTGAAAATCCACTACAAAAATGTCCACCATTTTTCAAAAGAAGAAGTGTCTCTGTTGAAAATTGGCCTTGGTTTTAGAAAGATCAGAAAATCGACATCAAAGTCGGAAAATGTGCATGCTAGCCTCATCAACGACCAGGGAAATGACTCCCTCTCAAAGCAGTTTCAACACCAAATCAATCCAAATTTGCCTGTTACATCTGTTGACTCAAATGTTAAAGGAGAAGGCAACATTGTTACCAAAAAAAAAAAGAAACGGCCCACACAAAAATCCTTTACAGTTTCCAGCACTCAGACTTCCAAAACTGTGGAAGCATCACAAAAAAATTTAAAACTTGAAGTACTTCCAGCTACATGTGTAAAACCGCCAAAAGACCCCTCTCTGACTGCAGAGAATCATGTCAGTGAATTAAATGAACCAGGTACTTTTGCGATGCAAGAGCTGAGTAGTCAAAATCTCTTTCTTTTGGACACGATGAATGCTCCTGACGAAAGAACACAAAATGCAACTACACAAACTAACAGACCAATTGAAATGAATTCCAATGTGATGGTTGATATTCAAGAGAAAACTACAATGCCAGTAGACACCTTTGATTCTGGTGATACAAGTGATACGCACATTATGTTCCGGCCATATCGATGTGTGCATGAAGGATGTGTGGCTGCCTTTTCAATCCAACAAAATCTTATCCTCCATTACAGGGCTATGCATCAGTCAGAACGTGATGAAAAAAACAGTGCTAAAGAATCTGACGGAGTGGTCCAAGTGCAGGAATACAGATGCCAAGTCAAACAATGCTCAAAAGTAGTCTCGAAAGTTACCAGTTTGTTGAAACACTATCTTTTGCTCCACAGGTGCACACTGGAAAAGGCAAGTGCGTTGTTATCCGGTGTTGAGGTCGGCACGTTTCAGTGTGACCAGTCAAAATGTTCTGCTCACTTTACGTGTCATTTGAAATACATTGATCATATCAAAAATGATCACAAAGCAATAAAGGTTTCAGCAGATGGGGACTTTGAGAGTGTGGACCTCACATTCGGATGTCAATTTGAAGGTTGCGATAGGGTCTATACGACCAAGTCAAACCTTCTTCGACATCTTATAAAGAAACATGATGCTACTTTTGAAACTATGAAAGAGAAACAAAAAAATGCAATTGGGAATGATATTCAAGCAAAAAAGTTAAGTGCAAGTTCTAACAATGGAAAAGAGAATATTGCAAATAACAATATTAAAACGAAGAAGAAGCATTCAAAAAAGAAAGAGGACAAGGTCCAAAACCTTCGGGTGGCCTTAGAAAAGCCTGCTCTTAAATCCATTGATGAAGCATCTGCCATGTGCAATCAAAGACTTCCTCTACAGTACCCTTGTATGATTGAGAGTTGTGATTCAGTAATGAGTGATGAGCAGAGCATACTGAAACATTACACCACTCATGGCCTCGCAGATCAGTACATTGAGGATCAAAGAAGCCAGTTCATTTTTTGCATGAAAAGCAGTGAGATGCCCAGAGAAGATAGTACCTCAAAAAACATTGAGGTGGAGGAAACGGTGAAGGTTCCTGATGAAGATCAAACAGACCATTCAAACGTCAGTCCTGAAGATGTAAGCCCAGAGCCTGCAGCGGAGGTTCCAGTTAATCCAGTTAATGAAAGTTTCACTGCCCCAACCATGCCAGTAGTCAAACGGAAAAGAGGTCGTCCACGAAAGTCAGAATGCAGAAACAAAGTCTGTGTAGAAAGAAAGCAAAGTCTTCGTAACTGCTCCGGGGAACAGGTTAAATGTATGCTGAAAGTCTCAGGATCCATATTGAACTCATCTAACTCTCAAGGGAACCAAGTAGAGAAAGATGTTGCACTAAAACTTTATAAGCCTTCAGAGTTTGAGACATCTGTCCTGAAGTTCAGCAAAGACACTCTATCCAATCCATCAAAACGACAGCGAAAACTTAAACCAATCATCCAAGAGAGAGACCAAGTCCAATGTGTTGTTAATTTCCGAAATCCACTAAAGATTGAGACTGTAAAGAATGTTAAAATTGTTATGTATGAAAACCTATCCACTTGTTCTGAACTTCTGTTGAAACAACTTCAAGATATGCAGCCCTTGGTCATCCTGGAAAAGGAGCTGCACAGTTGATGGTTAGATTAGACACACACACACACACACATCAAATCAAGGCCTTGCTCTCAGGACCACATACTGTGTCACATGCTGCTGACAGGTACATCCAGTTACACTCCCTTGCATTTATAGTAGTTCCAACACCTTGTTTGTTAACGGATTTTGATTAGTGCTTTAGAAGAAAAACAACTTTTGTACAATATTTAACATTTTGATGTACCATTATGGTTGTGTTAAAGAACCATTTTGTATTTCTGAAATTCTCGGATGAAAATTAGATGAAAACATTTTTTAAAATGTACAATTTTATGTAGGATGAAAAAAGTTATGATATATCCCTGTGGGATTTGTATTCTTTTTTGTTGTTGTTGTTGTTTTTGAAAGTATTTATTTTTTAACTTAACAGTAGTGTCAATGTACTTGTCTTCCACCTAACATTCAATTTAAGTAAACTGAATGCTCAGTGTAAATTGTGGCATCCACATGACTGCTTGGTGTCAGATTGTGGTGTTTGCAATTCTGAGGTTTTCTCCAGAAATCAAGAATGAGGTGAAATGTTTCAGTGTGAACGTTCAATATAGCACAGAATTGAAGGACAACGTACAAAATAAGGAGGGGAAAATAAA

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000314_01596442_01616381.mRNA True 7640 mRNA 0.41 8 1595831 1616381

Neighbor

gene id symbol gene type direction distance location
CI01000314_01566692_01584623 MTHFD1B, MTHFD1 coding downstream 11208 1566398 ~ 1584623 (-)
CI01000314_01540030_01540389 NA coding downstream 55442 1539795 ~ 1540389 (-)
CI01000314_01516556_01536550 ORC3.S, ORC3 coding downstream 58970 1516130 ~ 1536861 (-)
CI01000314_01501812_01512880 TFB1M coding downstream 81342 1501478 ~ 1514489 (-)
CI01000314_01477362_01488717 NA coding downstream 107111 1477216 ~ 1488720 (-)
CI01000314_01617434_01617974 CGA coding upstream 650 1616790 ~ 1618284 (-)
CI01000314_01628995_01630721 NA coding upstream 12056 1628437 ~ 1630721 (-)
CI01000314_01676239_01691014 NA coding upstream 58889 1675270 ~ 1691172 (-)
CI01000314_01714397_01715679 NA coding upstream 97594 1713975 ~ 1715994 (-)
G446421 NA non-coding downstream 38425 1557114 ~ 1557406 (-)
G446414 NA non-coding downstream 56429 1539021 ~ 1539402 (-)
G446319 NA non-coding downstream 232573 1362272 ~ 1363258 (-)
G446275 NA non-coding downstream 247026 1346114 ~ 1348805 (-)
G446279 NA non-coding downstream 253249 1340461 ~ 1342582 (-)
G446363 NA non-coding upstream 7643 1624024 ~ 1662795 (-)
G446438 NA non-coding upstream 72855 1689236 ~ 1689467 (-)
G446439 NA non-coding upstream 84294 1700675 ~ 1710504 (-)
G446450 NA non-coding upstream 105822 1722203 ~ 1722592 (-)
G446451 NA non-coding upstream 106730 1723111 ~ 1723500 (-)
CI01000314_00916594_00919809 NA other downstream 666248 916039 ~ 920514 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_012403 znf292a coding NC_007128.7 CM002901.2 49415354 ~ 49438873 (-)