CI01000314_00916594_00919809


Basic Information

Item Value
gene id CI01000314_00916594_00919809
gene name NA
gene type misc
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000314
NCBI id null
chromosome length 1736912
location 916039 ~ 920514 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000314_00916594_00919809.mRNA
ACATATTTTTTACACTGCAGTATGCAATCTGCTCTTTTTGTATTAACTTTTTTGACTATTTGGGTTTGGGTCTTCTCTTAAAAATCCTCTGTACCTCACACACATCAGCCTTTAGTCAGTTTAAATTAAAGTGCGTTGATCTTGAAGTGAGTTTTTTTGTTTATGAACACATCAGAAAAAGAATCTGGACATCTTAGGCAGCAAGATAACTGAATATGAGAAGAGTCCGTTTCATTCTTTTTATGGCTCAGACTAATACTAATGCATTAGCACATAATGCAGTTTAAGAGGATGGGATCTCATAAAAGATGACAGATTTTACTGCTTGATCAAAAGGATGTTGGATTTTAATAAAACCAAAAACAGTTAGTGACTTAAAAAAGAAAAAGTACAAAGATTTGTTTGTGTTTTTATTTCACATGCAAGCATGCGAGTGCAAGTATGTACGCATGCACATTTGCGCGAGTGTGTGTGAACAGGTCGTGTGTGGGATGGTGCAGGCTTACGCTTCACTGATAGTAAAGTAAAGCTCTGTTCATGGCTTTTCAGCACTTCTTTAAGTTGCCACCACTGTGTAATTTATGGGTGCTGAGAATCGCTGTGTTGAAACATGACGCAGATCTCTACTGCACAGAAATAGCTGAGAACGACTGACTCATATAAGATGAAACACACAAAATCTGGGTGATTAGCAAGTACCGGAACATGCCAAGGATATGGCTATGGGAACACACACGAATAAAAACACACCCTGTTGAAGGGCTGTTGCGTATACCCGAGTCTGGTCTCAAAGAGAACACTAGAGATAAGACACGGCCACACAATGTCCCCTCAGTAGGTCTCATTGACCGGCCCATGGCACCGGCTAGGAGCAGTGTGGTAATGCATGTCTGTGTGTGGGTGGGAGTTTCATCAGGGGAATGGGGGCACATGGTCTGGTTAACTAGTGATTTTCGTGGTGAACTCCTGTTCCAGGCTCTTATCATTAGCGTCCAGGAACCAATCAGCAGCCCTCTTCACTGTCATGCCATGCCTCTTCACCATGTGGCAACTGCTGGTTCAACCCGTTCTATCAACCACGTTCACCTGCAGCTACCCACAGTCACGTCTGACCTGGATGCATGAGCAAGATAACATTCACATCTGCAACGTCAAGAGAGAGGGGCACAAGGAAGCCTGACATTAATGATTAACAGCGCTAAAAGCCCCTGCTTTTGTATTCCCATGGTGCCGGGGCTATCTGCCGATCATGTGACCTGCACGGAGAAGATTGGGGGAGTGAGCGCAAAAGCAAACACAGGTGTTTGGGCTGGAGTCGGTCGGTGCTGTTAGGGACAACTGCAAACACAGTCTGCCATGCCTGGAGACGCGAGCGCCCGCCCACACCAACAGGACAGCCAACCGGAATCACTGACTCAACTCTGACGGGCTCTGCCTGACATTTCACTTGACAATTAAGGCTCTTCATTGGCCTATTAAAGTCTGCTGTTTTATTACAGTTTGACCTAAGGAGCTATGGATTCTTAATTAAGCATCATAAACAGGCATAGCCATAAACAAATAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000314_00916594_00919809.mRNA False 1565 mRNA 0.44 4 916154 920514

Neighbor

gene id symbol gene type direction distance location
CI01000314_00705124_00706620 NKX2-2, NKX2.2A, NX22A coding downstream 209503 704768 ~ 706651 (-)
CI01000314_00660252_00661614 NKX2.1A, NKX2.4A, NKX2-4 coding downstream 253854 659838 ~ 662300 (-)
CI01000314_00357634_00433275 RALGAPA2 coding downstream 482795 356057 ~ 433359 (-)
CI01000314_00345636_00351713 NA coding downstream 562312 345209 ~ 353842 (-)
CI01000314_00328906_00331255 NA coding downstream 584337 328599 ~ 331817 (-)
CI01000314_00931320_00933166 FOXA2 coding upstream 10259 930773 ~ 934321 (-)
CI01000314_00961406_01033528 PRKD3 coding upstream 40604 961118 ~ 1033528 (-)
CI01000314_01034963_01048224 MOCS3 coding upstream 114449 1034963 ~ 1048224 (-)
CI01000314_01160251_01175969 NA coding upstream 237890 1158404 ~ 1175969 (-)
CI01000314_01185737_01190407 NA coding upstream 264465 1184979 ~ 1190467 (-)
G445985 NA non-coding downstream 7780 908171 ~ 908374 (-)
G445904 NA non-coding downstream 112992 802786 ~ 803162 (-)
G445889 NA non-coding downstream 138240 777677 ~ 777914 (-)
G445853 NA non-coding downstream 198234 717649 ~ 717920 (-)
G445850 NA non-coding downstream 200587 715243 ~ 715567 (-)
G446098 NA non-coding upstream 17891 938405 ~ 938683 (-)
G446102 NA non-coding upstream 24135 944649 ~ 944886 (-)
G446107 NA non-coding upstream 34697 955211 ~ 955437 (-)
G446092 NA non-coding upstream 132003 1052517 ~ 1059941 (-)
G446148 NA non-coding upstream 213379 1133893 ~ 1134188 (-)
CI01000314_01617434_01617974 CGA other upstream 696276 1616790 ~ 1618284 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location