CI01000314_00357634_00433275 (RALGAPA2)


Basic Information

Item Value
gene id CI01000314_00357634_00433275
gene name RALGAPA2
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000314
NCBI id null
chromosome length 1736912
location 356057 ~ 433359 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000314_00357634_00433275.mRNA
AGTGTGTGGTGGCAGACTTGATCCCATATTGCTGTTTTTTGGTTGAGTGTCTTATAATGACATTACCCATAATGCTCTGCTACAATGATTATATGGTGTCAGAAGGGTCTTAGTGAAGTCATAGATGACACAACAGCTCGAAAAATTCTTCAACTTCTACCTGAGAAAATCAACAATCGATGGCAGTTTCACAGTATAGGTTCTATACTCAAAAAACTTTTGCACACTGGAAACTCTTTCAAGATCCGCTGTGAGGGCATGCGTCTGTTCCTGCTCTGGCTAGAGGCTCTGCAGAGTAACTGTGCAGAAGAACAGCTCCTCATATTCGCCTGCCTGATCCCAGGATTCCCTGCTGTACCCTCATCCAGAGGACCCTGCACACTGGACACCATCATATACAACCCCTTTTCCAACCCGCCTGACGCCAAGATTGTTCCAGAGGAGATCACCCCACTGGTGCCTGCGGTTCCCGGAGAGAAGGTGGCAGACGACCACACCTGTTCTGTCCTCCAAATTGTGCTCAAGGTCATGGTTCTCCAGGCATCCAGCTTGGACTGGAAAAACAAAGAGAACCAGGACACAGGCTTCAGATTTCTCTTTTCCCTGTTCAAGAAGTACTACCTGCCTCATCTCTTTCCTTCTTTCACAAAACACACCAACCTCTACAAGCCACAATTAGATCTTCCCATTCACAGACCAAAGCCCCTCTACATCCAAGTGATGCGCAACAGCGAGAGTACATACTGCACTAGGGATCAGTATCTGGCTCCCCGCGTGGCCTTCATCACGTGGCTTGTTAACTTCTTCCTGGAGAAGAAGTATGTGAACTCGGCCACGAGCAGCTCTAAGAATGGAGGAGAGGTCCTTCCTAAGATCATCCAGACTGTGACTGCGGGCGGCATCAGTCAGGAGAAGAGCGCAGACTCTGAGCCCAACGGGCCTGTGGAACAGGAGAAGAGTCACTCAAACAGCAGCACACTGTCCGATCGCAGAGGCAGCAACTCCAGCCTGTGTAGCATCGAGGAGGAGCATCGAGGCGTCTACGACATGGTGCAGTCCATCCTGCTCTCCACACGAGACAACGTCAACTTCGTCAACGAGGTCTTCCATCAGGCTTTCCTGCTCCCGTCCTGTGAAGCCTCAGCCACTCGCAAGGTGATCAAAGTGTACAGGAAGTGGATTCTGCAGGAGAAACCCACATTCATGGCTGAGCCTGAGACGACAAGCCAGGAGGAAGATGGAGAGGAAGAGCCCCTGGTCTCAGAGACGGACAGTGTGCATGTCTTGGAGACTCATGGGCATAAAAGATCATCCAGTTGGGGACGCACATACTCCTTCAGCAGCGCCATCAGCAGAGGCTGTCTGACAGAAGAACAAAACCTGGATGTGAAGGCTGGTATCCAGTCCACTCTGCAGGTGTTCCTGACAAACTCTGCCAACGTGTTCCTGTTAGAGCCGTGTCAGGATGTGCCCAAACTGCTGGAGAACCAGTTGGAAGTGTGCCGAGCTGTGCTCAGCGTCTACCGTCACATTATTATGGAGCAAAACATGAACCGCCAGACCTGGGAGCAGTTGCTGCAGGTGTTGCTGAGGATCACAGAGGCAGTGATGAAGAGACCACAGGAGAACCAAAGAAAGGACACGTTCGCTCACAGCCTGGCCAGCATCCTCTTCAAAACGATCTTTGTGGCGTGGGTGCGGGCCAACCTGACCGTGTTTATATCTCGTGAGCTGTGGGACGAGCTGCTGGCTGTGCTGTCGTCTCTCAGCCACTGGGAGGAGCTGGTGTTCGAGTGGGCCAGCATCATGGACTCTCTCACTGCGGTTCTGGCCCGTTACGTCTACGGAGTGATGCAGGACTCCCAGAAGTCTACAGATACAGCGCGGTCTTTCTCCTTGAGCTGGAGGAACTCTGGAGAGCAGGGCGGCACTCAGGAACCCATGAGGTTTCGTAGTGCCACCACCACTGGAGCTCCTGCGGTGGAGAAAGCTCGCAACAACGTCAGGCAGAAAGCATCAGCTAAGCGAAGTCAGTCTATCAGCAACTGTGTGCATCTTTGTGAGGCTTTGCCGGCCACTAAGAGTGTGCCCATGCTGCTCCACACTGTCAGCTCTTTCTTACCTGGTATCTCTCACAACTCTCACTGCTCTCACAGACTCTCAGACGTGGAGGAGTGTCAGCTGTCAGAATGTGAGATGGGGGATGGAGACAGTCCTCTGCCCCGCAGCAGTAGCACCTCTGACATCACACAGCAGATCAACGACACCTTCCCAGGTCAGAAGAGAGATGAGTCTGCGGATACAGGCAGAACGTCTGTGTCAGAGAGCAGCTCTACAGGGAAAAGAGAGAGCGACGCTCCCGCGATTCTGATCCGGCGGAGCAGCAGTCCAGCAGATCTGGATTATCCAGCAGATGGAGCTCAAACATTCCTGAAAATTAAACTGCGTGAGAAAAGTGAGAGTGTGAGCAGTGAGACGTCTAATGGTTATCTGAATGATGCTGAAGTGGGTCTGCTGACGTGGCATGCGGTTGAGGAGGAGCCGGACTCTCCCTCTACTCATGACATGAGCATGAGTGTTACCGTGGATACAGTGAGCCAGAGGAGCCTCCTGCTCAGCCACACTGAAGCACTGGCAGACCAAACTCATCTTCTGTACTTCACTCTAGCTCCATCCCTCAAAGGCAACATTTTTCCAAACCCTCTCATAGACAGCAGTGAGTTTCTGGCTGATGATGTCAGCATCATCGCCGGTGGCAGTTTGACCGGTTGGCACGCCGACTCAGCCTTCGTTCTCTGGAGGAGAATCCTGGGGATTCTTGGTGATGTGAACAGCATCCGCTGTGGCCGCATCCACGCCAAGATCTTCAGTTACCTCTATGAGCTCTGGCACAAGCTGGCCAAGATCAGAGATAATCTTGGGATCAGAGTGGATACAGACACAGCCATGGCCAGACCCTTGTTCATTCCTCCTCTTCGCATGCTGGCATCCTGGCTCTTCAAGGCTACCATGCTGCCGTCAGAGTTCAAGGCTGGGAAGCTACAGGCATATAAGCTGATCTGTGAGATGATGACGAAACATCAAGACGTGCTGCCCAACAGTGACTTCCTGGTGCACCTCTACCACGTCATGCACAAAGGCTTCACCAGCGATGAACAGGATGTGTTGAACACGATGATTAGGTGGTGCTCACCCCGTTTCTTCTTCCTGGGCCTGCCGGGCTTCAGCATGCTGGTGGGAGACTTCATCACCGCAGCTGCTCGCGTCCTCAACACGGACTCTTTTGAGGCTCCACGGATCGAGGCTCAGACAGTTCTTGGTTCGCTAGTGTGCTTCCCTAACCTGTATCAACAGATCCCATCTTTGCAGTCTGTTCCCGGATCTGAGGATATTGTAGTTGGCAACGAGGACATGAAGGACTACCTTGTAAACATTCTTCTGAAGACTGCGCGCAATGAGACATGTGAAGGAGCCAGGTGTGTAGCGATCTGCAGTCTGGGGCTGTGGGTGTGTGAGGAGCTGAGACACACAGAAACCCACCATCAGGTGAAAGATGCAATTAACGTCCTGGGTGTCACGCTGAAGTTTGGAAATAAGGTGGTGGCCAATGTGGCCTGTGACATCTTTCAGCTACTGATTTCTCACTGGCAGCACTTACAGAGGCTGGAGCTGTCCCTTCCCAAAAGAATTATAGAGATTTTTGTAGCAACCATAGCATTTCTTCTGCCCAGCGCTGAACACTCAACAGTTGAGGCAGATAAAAAGTTAATGGTGTCTCTACTGCTGTGCCTGCTGGACTGGTGCATGGCCGTACCCCTCTCCATCCTACTAGAGCCCATCACTATGCCTGTGCTGGACGACCCCACCTCACAGAAAGCCCCTCTTCTTGACTACATTTACAGGGTGCTGCACACTTGTGTATCAGGGTCTAACCTACACACTCAACAAAGTCACTACCTCCTCAGCCTTGCTGATCTGTCGACAGACTACGAACCCTTCCTTACTCTAGGCAATGTCAAGAGCTTTGAACCACCCCCCATACACAATGTCATGGGAGACTTTGGAAATCTCCTCACTGTGGCTGAAGAAAAGAAAAGGAGAAGCATGGAGCTGATTCCTCTGACTGCTCGGATGGTAATGACACACCTGGTCAATCATTTGGGACACCATCCTCTCAGCGGCGGCCCAGCCCTCTTAAACAGCCTAGTCAGTGAGAACCACGATAACCCCTATGTAGAGTCTTCCGAACTCTCCTCTGAAGTCTTCAAAAGCCCCAATCTACAGCTCTTTGTCTTCAATGACAGCACACTAGTCTCATACCTTCAGATCCCCTCTGATAATTCCAGCACGGCCGCAGTAAGTGCCAACCCGAGGGATCATTCCTCTGAGGTCCGCGTCATCGTCAGGGACATCTCGGGAAAGTACTCGTGGGACGGCGGCGTTCTCTTCTGCACTTTGGATGGAACTGGCTTGAGTTCCAGTGGCAGCAGAGATCAGTTGTCTCATGACACTGGTCGCTCTGAAAAGCAGAGCTCCGTCCGCTCCAGTAATTGCTCCTCTGAGTTGGAAATGGAGGATGGTGTGGATGTGTTGGACCAGCTACTGGAAGACCTCGGCCATAGCAGCCCTGAGTGCCTTCCGGAGCCCCAGTTGAGGCTCACCCAACCACCATCTCCACCCATGGGCATGAACCCTGAGATGGAAGGGCTCATCATGGATGCCATCCACAGACAGGCAAAGCAAGAGGATGAGGAGCTGATGCGGCGACAGAGTGAAGACCCCAGCGTCAGAGCAGAGAGACAGAGAGAGCCCACACACCAGGAGCCAAAATCACCATTTTACCTATGCAGACTTCTCCTCAATGACCTCGGCATGAACTCATGGGATCGCAGAAAGAGCTTTCATCTGCTAAAGAAGAACTCCAAGCTCTTGAGAGAGCTCAAGAATTTGGACTCAAGGCAGTGTCGAGAAACGCACAAAATTGCCGTGTTCTATATTGGAGAAGGCCAAGAGGACAAATTCTCCATTCTGTCCAACACCGAGGGCAGTCAGGCTTATGAGGACTTTGTCTCTGGGCTGGGATGGGAGGTGAATCTGGCCACTCACTGTGGCTTTATGGGTGGTTTGCAGAGAAATGGCAGCACAGGTAGCACAGCGCCATACTATGCCACCTCTAACGTGGAGGTCATCTTCCATGTGTCGACTCGCATGCCTTCTGACTCCGATGACTCCATCACCAAAAAGGCCTGCAGAGAGAAAAATTCATCAGGCTCCCGGACATTGAAGCCTCTCACCGTCAGAGCTCATATTAGCCCGTCTCAGCCACACTCCGCTTCCTCCGTTAGGCGAAGTGAGGGAGTGCGTGTGCCGCGAGCCATGCTCGATTCATTTTGGACATCAGACCCCGTAATTGCCGCGCTCCCTCTCTGGCAGCGAGAGAGGGCGACTGTTGGGCGGCACCTTCGTCACTTGGGAAACGATGAAGTGCACATTGTGTGGTCGGAGCACACGCGGGATTACAGACGAGGAATCATTCCCACCGACTTCGGAGATGTCCTCATCATCATCTACCCGATGAAAAACCACATGTTCTTTGTTCAGATCATGAAAAAAACCCAGAGGCGTCTTAAGATCTTCGTCAGGATGTGCGATGTTTCGTTGATTGTCAGGATATGTGGATTGTGGCTGGATGGTATCTCTTCCTGTCTGTTCTCTGAAAGCACTAATGCTCAGAGTCCATTACTGCACTGTCGGCATGCCACTCTCATCGCGGTCAAGCTGCCTTTCATCTTCCTCCTCCCGCGTCTGCCACTAGATCCCCAGAGAAACCAAGCGTACATCATTTGTAATTTCTCGTAAACACGTCACCTCTGTGAGTCTTGACTGCTGTGTGTTGAGTGGCCTGGATGCTGTCAGATGTATGGTTCCTGCACCATGTCACCGGCTGCAATTAGTGAAATTCCCTCAGCTGTGTCACTGTTATCTGCTGTTCCACTCAAATATCTCTCATGTCTTCCACTCGATAAATGCAAGCCTTGGTAAATGGAAGTACTGCCTTATCCATCGACTAGATTCAGCTGTCCAATGCATAGATTTTTTCCTGTCTCTTTGTGGCGTACCCTTTGCATGCAACATCGTGCTCAGACCATGTAAATTGATTTAATGTTTAAAACATAGTGTTTCTTCATTTTTTACTCTCTCTTGACCAGGTTCCTTTCTTTGGGCCTCTGTTCGACGGGGCGATAGTGACTGGAACGCTGTTGCCGAGTCTGGTGCGGGCCACGTGCATCAATGCAAGCAGGGCCGTGAAGTCTCGGCTGCCACTCTACCAGAGTTTGTATCCTTTCACCTTTATGGTTTGTGATGCAGTGAACTGTCAGTGATTTTGGTGCTAACTTAGTACCTGTATGGAAAACACACTCTGAGTGTGTCTCATTCCCTATAGTTCCTAATCATTATATCGTGAACATGACTTCCACTAAATATCGGGACACTGCAACGCCATTATGAGGTTACACATTAAAGGGTTAGTTAACCCAAAAATGAAAATGACCCCATGATTTACTCACCCTCAAGCCATCCTAGGAGTATATGACTTTCTTCTTTCAGACAAACACAATCAGAGTTATATTAAAAATATCCTGGCTCGTTTAAGCTGTATAATGGGAGTGATTGGAGTTTTTGAAGTCCAAAAAGTTTATTTAAAACTTTTTAAAGTAAAATAACGAGCTTCTGGAGCGACAGCCACACGCATTCAACGTATGTCCAAAAAGCGTTAAACATAGTACACAATGACATGACAGCCTTTATTAACCCCCCAGAGCTGCGTAGAGTACGCTTTATGATCAATGGATATACTTTTTTGGACTTAAAAACTCATCCTCCAATCACTCTCATTAAAACTGGGGGCTCGTCCGGGATCCATTTGAAATCCTTGAAAATAAGAAACCCAAGATGGCCGATACACAAATGAGACCTTTCGCCATTTTCCGGTAAGTAAATATTGTGTGTAGCCGATGCTTGCTGGTGTTTATGGTGTACTCTGGGAATTTTTAGGGAGCAAATGTTTCATTGCACTTGAATGATTTTGACAATGAGATGGCCCTAGAAATGCCTGGGTAGTGCATATTTACTACAGAGCTAGGGAGCAGATTGAAACAGACCTATCTAATTATTACAAATCAATGACCAACTTGAGGCTGAAATGTGGAAGACTTACACATCAAGTTTGCATTAACTGTTGTGCTTATACTATTGTTAAATGTATATTTTTTATGTTTCATAACTTTTTATCTGCATGTAGAACTTCTTCTCTACTCCCACCGATTGAGCATCTTGCTTATAAAAACAGTGTAAGCAGCCATTACCAGTTCGAAAGTGTTTGGCAAGAAGTGAAGTAATGTAATCCATCAAGTTGTGTAGTTGTAAATAATAAA

Function

symbol description
ralgapa2 Predicted to enable GTPase activator activity. Predicted to act upstream of or within positive regulation of GTPase activity and regulation of small GTPase mediated signal transduction. Predicted to be located in nucleus. Predicted to be active in cytoplasm. Orthologous to human RALGAPA2 (Ral GTPase activating protein catalytic subunit alpha 2).

GO:

id name namespace
GO:0005737 cytoplasm cellular_component

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000314_00357634_00433275.mRNA True 7436 mRNA 0.50 38 356057 433359

Neighbor

gene id symbol gene type direction distance location
CI01000314_00345636_00351713 NA coding downstream 2215 345209 ~ 353842 (-)
CI01000314_00328906_00331255 NA coding downstream 24240 328599 ~ 331817 (-)
CI01000314_00314539_00325075 NA coding downstream 30107 314228 ~ 325950 (-)
CI01000314_00003811_00027858 VPS39 coding downstream 328199 3783 ~ 27858 (-)
CI01000314_00660252_00661614 NKX2.1A, NKX2.4A, NKX2-4 coding upstream 226479 659838 ~ 662300 (-)
CI01000314_00705124_00706620 NKX2-2, NKX2.2A, NX22A coding upstream 271409 704768 ~ 706651 (-)
CI01000314_00916594_00919809 NA coding upstream 482795 916039 ~ 920514 (-)
CI01000314_00931320_00933166 FOXA2 coding upstream 497414 930773 ~ 934321 (-)
CI01000314_00961406_01033528 PRKD3 coding upstream 527759 961118 ~ 1033528 (-)
G445633 NA non-coding downstream 42419 311391 ~ 313638 (-)
G445634 NA non-coding downstream 48135 305061 ~ 307922 (-)
G445662 NA non-coding downstream 74893 268460 ~ 281164 (-)
G445658 NA non-coding downstream 88541 267197 ~ 267516 (-)
G445338 NA non-coding downstream 237339 88261 ~ 118718 (-)
G445692 NA non-coding upstream 71081 504440 ~ 505143 (-)
G445719 NA non-coding upstream 98780 532139 ~ 532441 (-)
G445730 NA non-coding upstream 111466 544825 ~ 545024 (-)
G445731 NA non-coding upstream 112801 546160 ~ 546489 (-)
G445735 NA non-coding upstream 116147 549506 ~ 549842 (-)
CI01000314_01617434_01617974 CGA other upstream 1183431 1616790 ~ 1618284 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location