Gene
RNA
| Item | Value |
|---|---|
| gene id | G445730 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000314 |
| NCBI id | null |
| chromosome length | 1736912 |
| location | 544825 ~ 545024 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU511636 | True | 200 | lncRNA | 0.54 | 1 | 544825 | 545024 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000314_00357634_00433275 | RALGAPA2 | coding | downstream | 111466 | 356057 ~ 433359 (-) |
| CI01000314_00345636_00351713 | NA | coding | downstream | 190983 | 345209 ~ 353842 (-) |
| CI01000314_00328906_00331255 | NA | coding | downstream | 213008 | 328599 ~ 331817 (-) |
| CI01000314_00314539_00325075 | NA | coding | downstream | 218875 | 314228 ~ 325950 (-) |
| CI01000314_00003811_00027858 | VPS39 | coding | downstream | 516967 | 3783 ~ 27858 (-) |
| CI01000314_00660252_00661614 | NKX2.1A, NKX2.4A, NKX2-4 | coding | upstream | 114814 | 659838 ~ 662300 (-) |
| CI01000314_00705124_00706620 | NKX2-2, NKX2.2A, NX22A | coding | upstream | 159744 | 704768 ~ 706651 (-) |
| CI01000314_00916594_00919809 | NA | coding | upstream | 371130 | 916039 ~ 920514 (-) |
| CI01000314_00931320_00933166 | FOXA2 | coding | upstream | 385749 | 930773 ~ 934321 (-) |
| CI01000314_00961406_01033528 | PRKD3 | coding | upstream | 416094 | 961118 ~ 1033528 (-) |
| G445719 | NA | non-coding | downstream | 12384 | 532139 ~ 532441 (-) |
| G445692 | NA | non-coding | downstream | 39682 | 504440 ~ 505143 (-) |
| G445633 | NA | non-coding | downstream | 231187 | 311391 ~ 313638 (-) |
| G445634 | NA | non-coding | downstream | 236903 | 305061 ~ 307922 (-) |
| G445662 | NA | non-coding | downstream | 263661 | 268460 ~ 281164 (-) |
| G445731 | NA | non-coding | upstream | 1136 | 546160 ~ 546489 (-) |
| G445735 | NA | non-coding | upstream | 4482 | 549506 ~ 549842 (-) |
| G445850 | NA | non-coding | upstream | 170219 | 715243 ~ 715567 (-) |
| G445853 | NA | non-coding | upstream | 172625 | 717649 ~ 717920 (-) |
| G445889 | NA | non-coding | upstream | 232653 | 777677 ~ 777914 (-) |
| CI01000314_01617434_01617974 | CGA | other | upstream | 1071766 | 1616790 ~ 1618284 (-) |
