G445662


Basic Information

Item Value
gene id G445662
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000314
NCBI id null
chromosome length 1736912
location 268460 ~ 281164 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU511567
ATTTAAGCAGGGATGCCCAAATAGCTTCTTTTTCATTGGACAGGGGTAAAAAGAAGTTGGAAATACCTTTGCAGGGATATGCTGTTAACAAACATCCTGATGCCATCCACACTGATGAGAGCGACGTTTAGATGAATATGTAAATATGTGCTGCATGCTTTCCTCTCAGGAACAAAATAAACACAACAAAAATGACAGCAGTGAGAAAACAGCAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU511567 True 215 lncRNA 0.40 2 268460 281164

Neighbor

gene id symbol gene type direction distance location
CI01000314_00003811_00027858 VPS39 coding downstream 240602 3783 ~ 27858 (-)
CI01000314_00314539_00325075 NA coding upstream 33064 314228 ~ 325950 (-)
CI01000314_00328906_00331255 NA coding upstream 47435 328599 ~ 331817 (-)
CI01000314_00345636_00351713 NA coding upstream 64045 345209 ~ 353842 (-)
CI01000314_00357634_00433275 RALGAPA2 coding upstream 74893 356057 ~ 433359 (-)
CI01000314_00660252_00661614 NKX2.1A, NKX2.4A, NKX2-4 coding upstream 378674 659838 ~ 662300 (-)
G445658 NA non-coding downstream 944 267197 ~ 267516 (-)
G445338 NA non-coding downstream 149742 88261 ~ 118718 (-)
G445341 NA non-coding downstream 191855 66475 ~ 76605 (-)
G445339 NA non-coding downstream 205209 61377 ~ 63251 (-)
G445634 NA non-coding upstream 23897 305061 ~ 307922 (-)
G445633 NA non-coding upstream 30227 311391 ~ 313638 (-)
G445692 NA non-coding upstream 223276 504440 ~ 505143 (-)
G445719 NA non-coding upstream 250975 532139 ~ 532441 (-)
G445730 NA non-coding upstream 263661 544825 ~ 545024 (-)
CI01000314_00916594_00919809 NA other upstream 634966 916039 ~ 920514 (-)
CI01000314_01617434_01617974 CGA other upstream 1335626 1616790 ~ 1618284 (-)

Expression


Co-expression Network