CI01000315_00227422_00233554


Basic Information

Item Value
gene id CI01000315_00227422_00233554
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000315
NCBI id null
chromosome length 1797778
location 226735 ~ 233554 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000315_00227422_00233554.mRNA
ATGGTGCTTTTGAGGGTTTTGTCTGTTCTCGTCACCGTTTGTGTTTTGGGAATGGTGATGAGTCAGACAACACTCAGTCCTGCTGTGACGATCACCACAGTCAGTGCAAACGTAACCACTGCCACTCCCAGCACTACAGGGCCCAGCTGCTCCGCCCTCAACACCTCCACCTGCACGGCCTGCGCTCCTGGCTCTTATTCCAATAACGAAACTCTGCTGTGTTCTTGCTGTTCTGAGGCAGGCCTGTGCGTATTACCTGAAGCCTGTCTTCTCTGCGTCCAGGGTTTCTATCAGCCTCTTGCAGGACAGCAGGGTTGTCTGCCCTGTTCATCTGGGTTTTACAGCAATTCCTCCAGTTGTACCCAGTGCCGGGTCTGTCCTGCAGGCTCAGAGGCTCTACAGATCGCTTCCAAAGAATGTATGCCCTGTCGCCCAGGAATGCACAAGCCTTCCTATCAAACCATGTGTCAGATTTGCAGCAGTGGTTTCTATCAGATCCGCTGGGGTCAGGAAAACTGTGACCTGTGTCCTGAAAACCATTACTGCCCTAGTCCTGATGTAAATCCGATCCAATGTCCCACTGATGCGTTCTGTCCTGAGGGCAGCACGGCCCCTGGTTACTGCATGGAGACCTTCTTCAGAAAGGTCGGGGAGACGTGTGAACTTGCTCCTGTTACTATTGCACTGCTTGTTATTGGAGGAGGAGTGGGTCTTCTCTTCATCATTGTTTTGGTTCTGCGGAGGAGAAGAGATAATGACAGTGAGCTGTCCCTCGCCCGTACACCCCTCTTGCGAAAAGACCGTCCACCTGGTCGCTTCTATGGAATCCCTTGTGATGCAGAGCCTGTTTATGCAGGCTGGTGACATTATCATGTACATTCCAGCTGCACATATTTTGTCTGAATGTTTCTATTTAGAACAGGGGTGTCCAATCCTGCTCCTGGAGGGCTGCACTCCTACAGAGTTTCGCTCCAACACACCTGCCTGGAAGTATCTAAGCATCTTTAAGACCTTGATTAGCTAATTCAGGTGTGTTTAGTTAGGGCTAGAATGAATAGTGGCCCTCTAAGAGCAGGATCGGACACCCCTGATTTAGAACTTTTATTGAACTGTTCTAAGCTTTATATTGGTAAGATACTATTAAATATTTATGAATGAAGACGCAGTTTTCTGCATTCGATTTTTAAACCTGTGTACTACTGATCTTGTTATGGAGTTACATCTTTATAGATTTGATTCTGACTGCTTTTCGAGTCTGAAGAGTAAACCATTCAGTATTTTGGGGGGTGTTTTCTTTTGTTTAATTTTGCACCGGATATTAAGTTAAGCCATGGCACTGAAAAATTTTTGGACTATGTTGCTGGATTAAGCTTATTTTGTTCACATGTGTGTTTATTTTTTTGGTACCACTACACTTGACTACCTGGGGTACTCGAGGTACATTATATTATATAAATGTGCATTATTTCTTGTATTTAACATGTGATGTTACATATTAGCTACTTTTGAAACAAAATTTGGACAATTTCCAATGTTGTATACTGGAATAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000315_00227422_00233554.mRNA True 1551 mRNA 0.45 7 226735 233554

Neighbor

gene id symbol gene type direction distance location
CI01000315_00224489_00226269 MRPL35 coding downstream 466 224447 ~ 226269 (-)
CI01000315_00177207_00200023 HSPA4L coding downstream 26587 176469 ~ 200148 (-)
CI01000315_00165287_00175495 PLK4 coding downstream 51240 165007 ~ 175495 (-)
CI01000315_00132146_00161605 ITPK1, ITPK1B coding downstream 65098 131811 ~ 161637 (-)
CI01000315_00116727_00120753 ITPK1, ITPK1B coding downstream 105982 116599 ~ 120753 (-)
CI01000315_00234857_00239314 NT5C1AB, NT5C1A coding upstream 1149 234703 ~ 239314 (-)
CI01000315_00245582_00258794 ZFYVE28 coding upstream 11998 245552 ~ 258794 (-)
CI01000315_00272349_00277104 NA coding upstream 38790 272344 ~ 277391 (-)
CI01000315_00300283_00302094 EGR2A coding upstream 66489 300043 ~ 302129 (-)
CI01000315_00317745_00369606 NA coding upstream 84151 317705 ~ 369606 (-)
G446661 NA non-coding downstream 3176 221059 ~ 223559 (-)
G446673 NA non-coding downstream 24544 201374 ~ 202191 (-)
CI01000315_00083820_00111502 EML5 non-coding downstream 114924 83393 ~ 112003 (-)
G446662 NA non-coding upstream 8731 242285 ~ 243187 (-)
G446677 NA non-coding upstream 30300 263854 ~ 264192 (-)
G446678 NA non-coding upstream 34534 268088 ~ 268521 (-)
G446707 NA non-coding upstream 60060 293614 ~ 293815 (-)
G446708 NA non-coding upstream 60577 294131 ~ 295286 (-)
G447377 NA other upstream 1095454 1329008 ~ 1330164 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location