CI01000315_00224489_00226269 (MRPL35)


Basic Information

Item Value
gene id CI01000315_00224489_00226269
gene name MRPL35
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000315
NCBI id null
chromosome length 1797778
location 224447 ~ 226269 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000315_00224489_00226269.mRNA
GACCTCGCCTCCGTGTATTCTCGCAGCGCGTTCTTTTTGTCCAAACCACCCACTGTAGTTTATGCGTCAGTGGCGTTTAAGATGGCGGCCACCTTGACGAGAGGTTTGCTGAGACCCTTGTCGGTTTTAGGCAGAGACTGTCTCACCCCTGCTGTCATACTCACACAGACAGCTCGCTTCTCAGCTGTAGTGCAGAGACATGTCTGCCGACCACTGCCTCCTGTTCATACTGCTGCTCCCGTACAAAACACTGGCCTGCTGAATCGCGTAACTCCCCTCATCCCTTCATTGATGCTCCAGCCAGTCAGGAACTTAACCTACTATAGTCTGAGGAAAGGCAAGAGGAAGTCTGTGAAGTCGGTGGTTCAAAGGTTTCTTAGGCTACACTGTGGCCTGTGGGTGAGGAGAAAGGCTGGATATAAGAAAAAGCTGTGGAAAAAGTCAGCAGCCCGGAAGAAGCGCCTGAGAGAACATGTGCTCTGTAATAAAACTCAATGTAAATTGCTGGACAAAATGACAACATCCTTTTGGAAAAGAAGGAACTGGTACCTCAACGACCCATACCAGAAGTACCATGACAGAGTGAACCTGAAGGTGTAAAACCCTCCTAACCTTATTCTGTTTAGTTTTCAAGCAAATAAA

Function

symbol description
mrpl35 Predicted to be a structural constituent of ribosome. Predicted to act upstream of or within translation. Predicted to be located in ribosome. Predicted to be active in mitochondrion. Orthologous to human MRPL35 (mitochondrial ribosomal protein L35).

GO: NA

KEGG:

id description
K02916 RP-L35, MRPL35, rpmI; large subunit ribosomal protein L35

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000315_00224489_00226269.mRNA True 642 mRNA 0.48 4 224447 226269

Neighbor

gene id symbol gene type direction distance location
CI01000315_00177207_00200023 HSPA4L coding downstream 24299 176469 ~ 200148 (-)
CI01000315_00165287_00175495 PLK4 coding downstream 48952 165007 ~ 175495 (-)
CI01000315_00132146_00161605 ITPK1, ITPK1B coding downstream 62810 131811 ~ 161637 (-)
CI01000315_00116727_00120753 ITPK1, ITPK1B coding downstream 103694 116599 ~ 120753 (-)
CI01000315_00083820_00111502 EML5 coding downstream 112444 83393 ~ 112003 (-)
CI01000315_00227422_00233554 NA coding upstream 466 226735 ~ 233554 (-)
CI01000315_00234857_00239314 NT5C1AB, NT5C1A coding upstream 8434 234703 ~ 239314 (-)
CI01000315_00245582_00258794 ZFYVE28 coding upstream 19283 245552 ~ 258794 (-)
CI01000315_00272349_00277104 NA coding upstream 46075 272344 ~ 277391 (-)
CI01000315_00300283_00302094 EGR2A coding upstream 73774 300043 ~ 302129 (-)
G446661 NA non-coding downstream 888 221059 ~ 223559 (-)
G446673 NA non-coding downstream 22256 201374 ~ 202191 (-)
G446662 NA non-coding upstream 16016 242285 ~ 243187 (-)
G446677 NA non-coding upstream 37585 263854 ~ 264192 (-)
G446678 NA non-coding upstream 41819 268088 ~ 268521 (-)
G446707 NA non-coding upstream 67345 293614 ~ 293815 (-)
G446708 NA non-coding upstream 67862 294131 ~ 295286 (-)
G447377 NA other upstream 1102739 1329008 ~ 1330164 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_012323 mrpl35 coding NC_007128.7 CM002901.2 43512876 ~ 43517542 (-)