XLOC_012323 (mrpl35)


Basic Information

Item Value
gene id XLOC_012323
gene name mrpl35
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007128.7
NCBI id CM002901.2
chromosome length 53461100
location 43512876 ~ 43517542 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00024240
aaaccGGCCACTGTAGTTGATACGTCAGTGGAGTTTAAGATGGCGGCCACCTTGACGAGAGGACTGTCAGGTTTGCTGAGACCACTGTCAGTTTTCGGCAGGGAATGTCTCTCTTCTGCTGTCAGACTCGCACAGAGCCCTCGCTTCTCGACTGTTTTGCCGAATCATGCTTTCAGAACACTGACCCCGGCTCACACCACTGCTCCTGTGCAGCTGACTGGACTGCTCAGTCGTGTAACTCCTCTCATGCCTTCACTGCTGCTCCAGCCGGTCAGGAACTTAACATACTTTAGTCTGAGGAAAGGCAAGAGGAAATCTGTTAAGTCGGTCACTGAAAGATTTTTCAGGCTACACTCGGGCCTGTGGATCAGGAGAAAGgctggATATAAGAAGAAGCTGTGGAAGAAGTCAGCGGCCCGGAGGAAGCGTCTGAGGGAACATGTTTTCTGTAACAAAACTCAGTGTAAATTGCTGGACAAAATGACGTCACCCTACTGGAAAAGAAGGAACTGGTACCTCAACGACCCATACCAGAAATACCACGACAGAACCAACCTGAAGCTATAAAATCATGTATTCTGTCTTATATATTTATCCCTATTTCTGTTAATATAGACATAAGGAATTGGCTGTTTAAGAACAATCTTGTGTAAATGAAACTGATAAATAAAATTCCTTTCAACAtt

Function

symbol description
mrpl35 Predicted to be a structural constituent of ribosome. Predicted to act upstream of or within translation. Predicted to be located in ribosome. Predicted to be active in mitochondrion. Orthologous to human MRPL35 (mitochondrial ribosomal protein L35).

GO:

id name namespace
GO:0006412 translation biological_process
GO:0005840 ribosome cellular_component
GO:0005739 mitochondrion cellular_component
GO:0003735 structural constituent of ribosome molecular_function

KEGG:

id description
ko03010 Ribosome
ko03011 Ribosome

ZFIN:

id description
ZDB-GENE-060929-1082 Predicted to be a structural constituent of ribosome. Predicted to act upstream of or within translation. Predicted to be located in ribosome. Predicted to be active in mitochondrion. Orthologous to human MRPL35 (mitochondrial ribosomal protein L35).

Ensembl:

ensembl_id ENSDARG00000070589

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00024240 True 686 mRNA 0.46 4 43512876 43517542

Neighbor

gene id symbol gene type direction distance location
XLOC_012322 hspa4l coding downstream 46559 43430365 ~ 43466317 (-)
XLOC_012321 plk4 coding downstream 84479 43410753 ~ 43428397 (-)
XLOC_012320 itpk1b coding downstream 112837 43297456 ~ 43400039 (-)
XLOC_012318 EML5 coding downstream 225586 43039463 ~ 43287290 (-)
XLOC_012319 NA coding downstream 260956 43250258 ~ 43251920 (-)
XLOC_012324 si:dkey-21a6.5 coding upstream 1748 43519290 ~ 43533095 (-)
XLOC_012325 nt5c1ab coding upstream 16573 43534115 ~ 43558494 (-)
XLOC_012326 zfyve28 coding upstream 48086 43565628 ~ 43594864 (-)
XLOC_012327 rtkn2a coding upstream 93352 43610894 ~ 43623370 (-)
XLOC_012328 NA coding upstream 124275 43641817 ~ 43649494 (-)
XLOC_012310 NA non-coding downstream 948724 42540854 ~ 42564152 (-)
XLOC_012308 NA non-coding downstream 1240278 42261845 ~ 42272598 (-)
XLOC_012306 NA non-coding downstream 1335888 42167187 ~ 42176988 (-)
XLOC_012304 NA non-coding downstream 1420040 42092334 ~ 42092836 (-)
XLOC_012330 FO704797.1 non-coding upstream 190857 43708399 ~ 43718395 (-)
XLOC_012332 NA non-coding upstream 486897 44004439 ~ 44010882 (-)
XLOC_012333 BX511267.1 non-coding upstream 541269 44058811 ~ 44058927 (-)
XLOC_012334 NA non-coding upstream 552799 44070341 ~ 44116077 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) CI01000315_00224489_00226269 MRPL35 coding CI01000315 null 224447 ~ 226269 (-)