CI01000320_03327551_03328396


Basic Information

Item Value
gene id CI01000320_03327551_03328396
gene name NA
gene type misc
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000320
NCBI id null
chromosome length 3894707
location 3327201 ~ 3328396 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000320_03327551_03328396.mRNA
ATGGAGACGTATGGCATTCCAGCACCGCGGATGGATTGGAATTCGGCCAACTTGCCCGAAGCATGGAGGCGATTCAAACAACAAGCCGAGCTGATGTTTTTTGGCCCATTGCGGGAGAAACGCGAACCAGAGAAGTGCAGTTACCTTCTTTTATGGATCGGGGACAAGGGACAGGACATATACAACACCTGGTCACTTTCCAAAGACGAAGCTAAAAAGCTACAGACATACTACGATAAGTATGCAGCTTATATTACTCCCAAATCCAACCCGATATATGCCAGATATCGCTTCCATGAGAAAATGCAGGCCGAAGGCGAAACATTTGAACATTTTATAACTGAGCTGAAGCTACTCGTAAAAGATTGCAGTTACCCAAACGAAATGGTCAGGGACCGCATTGTGTTCGCCACGAACTCCCCACGGGTCTGCGAAAAGCTGTTAAGCCAGGGAGCCGAGCTAACATTAGATAAGGCCATAGATATTGTCCGTTCCCACGAGCTCGCACAGATGCAATTAAAAGAGATGACTGGATCAAAAGACGCCCCCAAAATTGATGCTGTGAATTCAGCAAAACAAAGACAAAATGCCCACAGATACATAAAAACGAAAGATCATAAACCAATGCACAGAGAATGTGACAGATGTGCAGGCTCACACAGCCCAAGAGAAGCGTGCCCAGCTAGAGGCAAATAGTGTATGAAATGTAAAAAGTACAACCATTTCGCAAAAGTCTGCAAGACCAAGAATGCCGCTCCACCAAAGCCTCAGAGGAGACCTGTGCATGCTATAGAGCAAAATAACGAAGAGGAGCAGTATGAATTGTATATTGACAGCATCACAACT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000320_03327551_03328396.mRNA False 846 mRNA 0.46 1 3327551 3328396

Neighbor

gene id symbol gene type direction distance location
CI01000320_03117532_03169741 NA coding upstream 157802 3115820 ~ 3169749 (+)
CI01000320_02841856_03008012 PTPRU, PTPRUA coding upstream 318811 2841090 ~ 3008740 (+)
CI01000320_02787144_02831818 NA coding upstream 495695 2787144 ~ 2831856 (+)
CI01000320_02703432_02709038 NA coding upstream 618429 2703080 ~ 2709122 (+)
CI01000320_02643613_02656509 GMEB1 coding upstream 670137 2643131 ~ 2657414 (+)
CI01000320_03490995_03506693 NA coding downstream 161526 3489922 ~ 3506840 (+)
CI01000320_03552616_03556945 NA coding downstream 224220 3552616 ~ 3557723 (+)
CI01000320_03570242_03578769 NA coding downstream 241019 3569415 ~ 3578835 (+)
CI01000320_03616557_03637085 UB2E2, UBE2E1, UBE2E2 coding downstream 287446 3615842 ~ 3638047 (+)
CI01000320_03644131_03647944 RPL15, RL15, RPL15.L coding downstream 315404 3643800 ~ 3647976 (+)
G455483 NA non-coding upstream 28319 3298999 ~ 3299232 (+)
G455480 NA non-coding upstream 32851 3294421 ~ 3294700 (+)
G455478 NA non-coding upstream 33760 3293378 ~ 3293791 (+)
G455477 NA non-coding upstream 35095 3292245 ~ 3292456 (+)
G455475 NA non-coding upstream 36435 3290906 ~ 3291116 (+)
G455513 NA non-coding downstream 127519 3455915 ~ 3458741 (+)
G455536 NA non-coding downstream 130695 3459091 ~ 3459326 (+)
G455537 NA non-coding downstream 132947 3461343 ~ 3461585 (+)
G455540 NA non-coding downstream 136890 3465286 ~ 3466832 (+)
G455541 NA non-coding downstream 138615 3467011 ~ 3471750 (+)
G455418 NA other upstream 169903 3157045 ~ 3157648 (+)
G455404 NA other upstream 206446 3120816 ~ 3121105 (+)
G455393 NA other upstream 227262 3099824 ~ 3100289 (+)
G455129 NA other upstream 1130543 2190317 ~ 2197008 (+)

Expression


Co-expression Network