G455404


Basic Information

Item Value
gene id G455404
gene name NA
gene type unknown
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000320
NCBI id null
chromosome length 3894707
location 3120816 ~ 3121105 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU522839
TGGACGCTATGCTACAGACGTGGCCGAGTTCTGGAAAAAGTACGCCAGGAAGGGGTCAGCCTAATACTGGTGGCTCCGTACTGGCCGACCAGGATATGGTTTGCGGACCTAATGTCCCTGTTAGACGGCTCTCCATTGGAGCTTCCTCTCAGGCAGGATCTCCTGTCTCAGGCGGGCGGCACAATACTCCATCCCCGCCCAGAACTATGGAAACTGTGGGCCTGGCCTCTGAGGGGGCAAGGCTCATAGATTCTGGTCTCCCAACCGAGGTTGTGGAGACCATCCTTCAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU522839 True 290 TUCP 0.57 1 3120816 3121105

Neighbor

gene id symbol gene type direction distance location
CI01000320_02841856_03008012 PTPRU, PTPRUA coding upstream 112076 2841090 ~ 3008740 (+)
CI01000320_02787144_02831818 NA coding upstream 288960 2787144 ~ 2831856 (+)
CI01000320_02703432_02709038 NA coding upstream 411694 2703080 ~ 2709122 (+)
CI01000320_02643613_02656509 GMEB1 coding upstream 463402 2643131 ~ 2657414 (+)
CI01000320_02625602_02629500 RAB42A, RB39B, RAB42 coding upstream 489255 2625304 ~ 2631561 (+)
CI01000320_03327551_03328396 NA coding downstream 206446 3327201 ~ 3328396 (+)
CI01000320_03490995_03506693 NA coding downstream 368817 3489922 ~ 3506840 (+)
CI01000320_03552616_03556945 NA coding downstream 431511 3552616 ~ 3557723 (+)
CI01000320_03570242_03578769 NA coding downstream 448310 3569415 ~ 3578835 (+)
CI01000320_03616557_03637085 UB2E2, UBE2E1, UBE2E2 coding downstream 494737 3615842 ~ 3638047 (+)
G455387 NA non-coding upstream 33709 3086712 ~ 3087107 (+)
G455336 NA non-coding upstream 217108 2884278 ~ 2903708 (+)
G455320 NA non-coding upstream 419745 2700777 ~ 2701071 (+)
G455291 NA non-coding upstream 549479 2571033 ~ 2571337 (+)
G455263 NA non-coding upstream 578758 2541774 ~ 2542058 (+)
G455408 NA non-coding downstream 3594 3124699 ~ 3124908 (+)
G455426 NA non-coding downstream 49457 3170562 ~ 3254377 (+)
G455471 NA non-coding downstream 148496 3269601 ~ 3269828 (+)
G455475 NA non-coding downstream 169801 3290906 ~ 3291116 (+)
G455477 NA non-coding downstream 171140 3292245 ~ 3292456 (+)
CI01000320_03117532_03169741 NA other upstream 2849 3115820 ~ 3169749 (+)
G455393 NA other upstream 20527 3099824 ~ 3100289 (+)
G455129 NA other upstream 923808 2190317 ~ 2197008 (+)
G454251 NA other upstream 1905784 1214578 ~ 1215032 (+)
G455418 NA other downstream 35940 3157045 ~ 3157648 (+)

Expression


Co-expression Network