G459812


Basic Information

Item Value
gene id G459812
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000321
NCBI id null
chromosome length 5206101
location 5035347 ~ 5035939 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU527838
CAGGTAAAAACGGAATTGAATCGTCTGCTGTCTAGAAAAATCCTCTTTTCATTTAAACAACCGTGAGGCAGCAAAAGTGTAAGTGGTAGATTTTTTTCTCGTTATATTTGGCTCACATTCAGCCTTAGATCTGAAAAGTGAGGAGAGGAGAGCCAGCAACGTCTGTGAAGCATGACAGAATTTCAGAGCTGTTTTTTTTTTCCGAGGAGATGAGAGCGAGAAAAAGAAAAAGGGGAGAGAGAGAGCGCACCCTACATTAAAGGTGTTGGGTGGATAAAAGAATGGAAAAACTGCATTAAAGACAACGGGAGTGGATGTACATTTACTCAGAGAGGATTTCGAGATAGTTGAGGGGACGTAAATAAGATGAACAAAGGGATGGTGTGCAAATGCAAGAGAAGAGCGTGTTTGTGAGACAGAACAAGAGGGGGAGGAAGAGAAAGTACGGCTCTGTCCTGTGAGAGGGAGCACAGTGCAGTGACCGTGAAAGTGCTTAAATAAACACTGCAAGAGAGGAGAGGAGCAGGAGGAGGAAGAGGAGGAGGAGAGGGTGCAGGCGAGATAAAGAGATGAACCAGCAAATTGAGCCAGAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU527838 True 593 lncRNA 0.45 1 5035347 5035939

Neighbor

gene id symbol gene type direction distance location
CI01000321_05000584_05005208 NA coding upstream 29968 5000584 ~ 5005379 (+)
CI01000321_04859626_04859952 NA coding upstream 174431 4858995 ~ 4860916 (+)
CI01000321_04774523_04814193 NA coding upstream 221108 4773839 ~ 4814239 (+)
CI01000321_04748037_04748315 DPM3 coding upstream 287029 4747650 ~ 4749579 (+)
CI01000321_04716387_04724423 TRIM46, TRIM46B coding upstream 310581 4716387 ~ 4724766 (+)
CI01000321_05126875_05128453 NA coding downstream 90454 5126393 ~ 5129935 (+)
G459792 NA non-coding upstream 9534 5018910 ~ 5025813 (+)
G459785 NA non-coding upstream 22035 5012672 ~ 5013312 (+)
G459683 NA non-coding upstream 187191 4847947 ~ 4848156 (+)
G459682 NA non-coding upstream 188764 4846356 ~ 4846583 (+)
G459231 NA non-coding upstream 323899 4710432 ~ 4711448 (+)
G459815 NA non-coding downstream 1074 5037013 ~ 5037467 (+)
G459818 NA non-coding downstream 5020 5040959 ~ 5041256 (+)
G459819 NA non-coding downstream 6609 5042548 ~ 5042773 (+)
G459848 NA non-coding downstream 34864 5070803 ~ 5082201 (+)
G459843 NA non-coding downstream 43073 5079012 ~ 5153714 (+)
CI01000321_04515562_04517953 MRPS21 other upstream 517160 4515534 ~ 4518187 (+)
G459303 NA other upstream 546795 4485397 ~ 4488552 (+)
CI01000321_04013470_04014515 CACNG8 other upstream 1021681 4013468 ~ 4015412 (+)
CI01000321_03795430_03804685 SHISA7B, SHISA7 other upstream 1232465 3792915 ~ 3805511 (+)

Expression


Co-expression Network