CI01000325_05442728_05452338


Basic Information

Item Value
gene id CI01000325_05442728_05452338
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000325
NCBI id null
chromosome length 10587162
location 5442631 ~ 5452456 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000325_05442728_05452338.mRNA
AGTTTTTTATAGAAAAAAATAAATCTACACCCCACCCACCACCACTCACCAAGCGGGAGTACCGGCACTTTATTTTTTCTACTTCAAGTACTGGACGTACTGTCAGACACAGCTAATAATGGATTTGGAAGACAATTATCAATATGTTTATCTCAGAGATATTAAGGACACATCTGGACCTCGAACACAGACTAAAAGCCAGGATGAAGGAAAAGGTGAAAAGCGCAGAGGAAGTAGATATTTGGTGTTGACAACAGCATGTCTCGGGCTCATTTGTGTTCTTCTGCTGGTCTTCATCATACTGCAGCACAGCACCATCACAGCAGAGAGAGACCTGTTAAAGAGTTACAAGAACACAGCTGAAGAATTCAATCAGACTATCAACAGCTTACAGGACAATTACACTGATCTAATGTTTGAAAAAGACCAACTGCAGAACAACTTCACCTCTTTGAGTCAAAAGAAGGTAGAGCTGGAGCCTGAACTAAGCAAATTATATGAACAAGTTGAAGAGTTCAATCAGACTATCAACAGTTTACAGGACAGTTACACTGATCTAAAGACTAAAAAAGACCAACTGCAGAACAACTTTACCTCTTTAAGTCAGAAGAAACTGGAGCTGGAGACTGAACTACAGAAGTTATATGAACAAGGATCTTCAGGTCTGGAGTCCAGTATTAAGATTGGAGACAAAGTCCGTGTGAAGCCGTCTGTTGTTACTCCAACACACAAATGGGGAGCAGTTACTCACAAAAGCATTGGTGTTGTTAAAAAAGTTCAGGGTGAGTCTTTGATTGTAGATTTCCCTGGGCATAAAAACTGGAATGGTATAATTTCAGAAATGGAGCTTGTGACTGACACTTGTACAGAAGTTCAGGGTGAGTCTTTGATTGTAAATTTCCCTGAGCATAAAAACTGGAGAGGTATAATTTCAGAAATGAAGCTTGTGACCGGCGCTTGTACAGATATCAATGTGATTGTGGATTTCCCGGAACACAAAGGCTGGAAAGGGATTTTCTCTGAAATGGAATTGATAGCTGATTCAGCACGACCGTCATCCAGCGCGAAACACACGCAGAGTGAGAACCCGTTATGTAGTGTTGTGAATCAACTAAGTTGCTCCAAAGCTGTGTCTCTCACTTCTTTCCTTTTACCTAGAGTTGTTCCGATTCCGAAACCATATCGTCGTCATGGAAACATGAAGCCCTGGCGTTTGGACCAGAGTGAAAACAAACGACATATCACTGTATACCACCAGTATGTGTGAAAACACTCACTGTGGCTTTTTAAATGAATTGGTATTCATTCCTAGATTTATATCTGTTATTTTTCAGTTGTGGCTGACTATCAAACTAGACAATAAA

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000325_05442728_05452338.mRNA True 1364 mRNA 0.40 9 5442631 5452456

Neighbor

gene id symbol gene type direction distance location
CI01000325_05430077_05434997 NA coding downstream 7378 5430010 ~ 5435253 (-)
CI01000325_05382331_05383024 NA coding downstream 59607 5382050 ~ 5383024 (-)
CI01000325_05360218_05367885 MYLK4B coding downstream 74618 5359816 ~ 5368013 (-)
CI01000325_05334527_05357747 GMDS coding downstream 83869 5334527 ~ 5358762 (-)
CI01000325_05196396_05226419 EXOC2 coding downstream 216212 5196165 ~ 5226419 (-)
CI01000325_05462254_05467455 NA coding upstream 9066 5461522 ~ 5467455 (-)
CI01000325_05531464_05543064 ITPK1A coding upstream 78795 5528844 ~ 5543064 (-)
CI01000325_05572394_05599826 BTBD7 coding upstream 119926 5572382 ~ 5599826 (-)
CI01000325_05706302_05715899 NA coding upstream 253745 5706201 ~ 5715899 (-)
CI01000325_05746064_05750106 NA coding upstream 293608 5746064 ~ 5750106 (-)
G465647 NA non-coding downstream 161924 5229636 ~ 5280707 (-)
G465643 NA non-coding downstream 257571 5183134 ~ 5185060 (-)
G465602 NA non-coding downstream 419360 5021285 ~ 5023271 (-)
G465555 NA non-coding downstream 448219 4992176 ~ 4994412 (-)
G465550 NA non-coding downstream 465345 4975581 ~ 4977286 (-)
G465709 NA non-coding upstream 58705 5511161 ~ 5511386 (-)
G465710 NA non-coding upstream 59229 5511685 ~ 5511928 (-)
G465711 NA non-coding upstream 62517 5514973 ~ 5515784 (-)
G465829 NA non-coding upstream 201516 5653972 ~ 5654600 (-)
CI01000325_04815250_04816016 CHURC1 other downstream 626553 4815234 ~ 4816188 (-)
G464576 NA other downstream 1993453 3444730 ~ 3449178 (-)
G463451 NA other downstream 3086028 2347744 ~ 2356603 (-)
G462516 NA other downstream 4525841 916315 ~ 916790 (-)
G465716 NA other upstream 173757 5626213 ~ 5628168 (-)
G467570 NA other upstream 2163030 7615486 ~ 7616830 (-)
G467578 NA other upstream 2493889 7946345 ~ 7955192 (-)
CI01000325_08571807_08594165 NA other upstream 3112174 8568722 ~ 8594736 (-)

Expression


Co-expression Network