CI01000325_10072629_10073699 (PAQR8)


Basic Information

Item Value
gene id CI01000325_10072629_10073699
gene name PAQR8
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000325
NCBI id null
chromosome length 10587162
location 10072431 ~ 10074411 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000325_10072629_10073699.mRNA
TCTTTCTTTGCTTAATAAGGCACATTTAAAAGTAGCACGTTTATAGTAATTTATAGTAAATACTATAGTGTTTTTGAACCATACTATAGTAAAGTACTTGAATTAATTTGTTGTGGTAATTCTATAGTTGCTGTTGTAACATAACAGCTATAGTAATATAAACAAATTACTTTACCCAATACTGTACTAAGTTTTCTACAACTGTATGGGTATATTATACTACAATATACACTACAGTTTACTGTAGTAAAAACTAAAGTATACTGAAGTATACAATTGGAGTATATATTGGAGATTGTATACTAAAGTATACAATCTCCAAACCTATTAAACTCCCTATCTAGACAGCATTTTTAGGCATCATACATATCTGCAACCTATCTATACAGAAATCATCTATAACCCACAACAGTGCTTTCTAGGTAGGCAACATACTAGGTTTCAAGACACAGCTAGTGCTTCAAAATTGACAAATGTTGGTTTGGAGCAATATACGGCAGAGCACAATGGGAGTACTTGGCAAACACAATGATCAATTCAACCAGGCCAGATATTAACTTATCAAGTGTAAGAGGTTTAGTTCAGCAAGAACTGGCTCTTTGTCTGGCAGAGGTATGAATCATGGCATTCTGATTTGTCAATATAATTTATCCTCGTGCTGTTTTCTGCTTCTCATTGCAGCTGATTTTTGTCATTCATCCAGAGTTTCACCATGGCAAGCGGAGTTTTGGGCCGTCTTAGTACACTGACATTGAGTATACAGCAGCTGGGTCAGTTACCACACTTGTCGAACTGGTTGCCCCGTCTACCTTTGCCTAAAGCCACCGTACTCGCCTCTGATGTGCCGAGCCTGTTTCGTGAGCCCTACATCTTGTCGGGCTATCGTCCGGTCCATCAGGAATGGCTGAGCTACTTCTGTAGTCTCTTTCAATGTCACAATGAGTCGCTCAATGTGTGGACACACCTGCTGGCGATCCCTGCTGTTCTACTCCACTTTTCTTTATTCACAGTCACATGGGGGCTGACGCTCAATGTGGCGTCTTTGCCTCTGTTTTTGTACGTGTTGTCGTCACTTACCTACCTCAGTTTCAGCGTGGCCGCCCACCTGCTGCAGTCAAAGTCTGAGCTGGCCCATTACTCTCTCTTCTTCGTAGACTATGTTGGTGTAGCTGTTTACCAATATGGCTGTGCACTTGGCCACTATTTTTACTGTTCTGAGCCAGTATGGAGACAAAGCCTAGTGGGTGCTGTGTTTCTACCCGGTGCCGCGGTGCTGGCCTGGTTGTCCTGCGCCAGTTGCTGCTACGCCAAATTCCGTTACCGCCGTCCATACCCTCTCCGCCGCAAGATCTGCCAGATCATTCCCACCAGCCTGGCGTACTTGCTCGACATAAGCCCTGTAGCGCACCGCCTGGTCACCAGATCTTGGGACGAGCCAGTGTTGGTGTTTCATGCCCTGCAGGTGGTGTTTTTTGTGTTGTCGGCTCTGTTTTTCTCTTGCCCAGTTCCTGAACGCTTCTTTCCAGGGAGATGTGACATTTTGGGTCACGGACATCAGATCTTCCACATCTTCCTGGCCATGTGTACTATGTGCCAGCTGGAGGCAATGTTTAGAGACTATCTGGTGCATCAGCAGTCTGTAGTAGGTGTGCATGGAGAGCACTTCATTCTACTGGCTGGAGGATCGTTCTTCTTATTGGTGTTGTGCAGCGTTCTGACTGCAGTTCTAATGAGAGAAGCGGTGCAAAGACAGCTGAAGAGGAAAGACTGCAAACAAATTTGAAAAGATTTTACAAAACAGATTTGCTTAGTTACACAGTACCACAAGGTAATTATTAATATAAATGTCAAAATGAAATTAATTTTATTTTAGTGCATTTATTATGAGAATTGTGATGGGATGTCACTTTTCTTTTTTTCTTTTTATTTTATTTCAAAAGTCCCATAATCACATATTGAAATCCCACACTCTCAGAAAAAA

Function

symbol description
paqr8 Enables steroid binding activity. Acts upstream of or within response to steroid hormone and signal transduction. Located in plasma membrane. Is expressed in several structures, including brain; female organism; gill; gonad; and intestine. Orthologous to human PAQR8 (progestin and adipoQ receptor family member 8).

NR:

description
Progestin and adipoQ receptor family member VIII

GO:

id name namespace
GO:0016021 integral component of membrane cellular_component

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000325_10072629_10073699.mRNA True 1981 mRNA 0.42 1 10072431 10074411

Neighbor

gene id symbol gene type direction distance location
CI01000325_10057059_10062989 ZNF395B coding downstream 9442 10056146 ~ 10062989 (-)
CI01000325_10035815_10039749 NA coding downstream 30128 10035756 ~ 10042303 (-)
CI01000325_09999928_10011153 SLC25A24 coding downstream 61278 9999191 ~ 10011153 (-)
CI01000325_09844992_09865415 KIFAP3, KIFAP3A coding downstream 207016 9844947 ~ 9865415 (-)
CI01000325_09812512_09821344 NA coding downstream 251087 9812491 ~ 9821344 (-)
CI01000325_10092490_10094515 STMN4 coding upstream 18003 10092414 ~ 10094515 (-)
CI01000325_10200118_10220665 SCCPDHB coding upstream 125568 10199979 ~ 10221251 (-)
CI01000325_10223671_10247196 KIF26BB coding upstream 148434 10222845 ~ 10247532 (-)
CI01000325_10259809_10261986 LFT1 coding upstream 185062 10259473 ~ 10261986 (-)
CI01000325_10330659_10345549 FZD3A, FZD3 coding upstream 256248 10330659 ~ 10345549 (-)
G468680 NA non-coding downstream 74861 9996841 ~ 9997570 (-)
G468681 NA non-coding downstream 103401 9967709 ~ 9969030 (-)
G468539 NA non-coding downstream 162446 9902600 ~ 9909985 (-)
G468641 NA non-coding downstream 237307 9834753 ~ 9835124 (-)
G468640 NA non-coding downstream 238292 9833764 ~ 9834139 (-)
G468699 NA non-coding upstream 181368 10255779 ~ 10256848 (-)
G468705 NA non-coding upstream 182857 10257268 ~ 10268538 (-)
G468710 NA non-coding upstream 217639 10292050 ~ 10302733 (-)
G468711 NA non-coding upstream 232048 10306459 ~ 10307849 (-)
G468828 NA non-coding upstream 277587 10351998 ~ 10352296 (-)
CI01000325_09286047_09286556 ERH.L, ERH, ERH.S other downstream 785107 9285532 ~ 9286556 (-)
G467741 NA other downstream 1374848 8679172 ~ 8697583 (-)
CI01000325_08571807_08594165 NA other downstream 1500953 8568722 ~ 8594736 (-)
G467578 NA other downstream 2117239 7946345 ~ 7955192 (-)
G467570 NA other downstream 2455601 7615486 ~ 7616830 (-)
G468702 NA other upstream 92688 10023665 ~ 10193979 (-)
G468823 NA other upstream 241719 10316130 ~ 10316685 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location