XLOC_013283 (parp12a)


Basic Information

Item Value
gene id XLOC_013283
gene name parp12a
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007129.7
NCBI id CM002902.2
chromosome length 51023478
location 12839126 ~ 12858016 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00026285
TGAAATCTACTTACTGTCGTTGACGGCATCGACGAAAATGAATATCGTTTCTAGACACATATATAACTTCGTTTGCAAACAAGAAGGCAGTTCGGACTATGGTAAAGTGGAGATTAATCTGCGGAAGAGTTTCACGGTGGCGGATCAGGTTTTGTCTATGGTGCTCGATGATAGTCAGAAATTTGTTATAGTTCATAATGATGAAAACCCGAATCCCAGAAGCTCCATACCAGCTGCCGACAGCCTCATCCTGGCCAAAACCTCACTGCGAGTGTGTAAACACGACAAATGCTCCGGGTGTGAAGATTTACACCTGTGCAGGTACTTTGTGTGCGGGAGCTGCAGATTCGAggGAAAATGCAAGAATTCCCATGACTTGAAATCCGCACATAATTCTGACCTGCTGAAGAAAAACGATCTCCTTGAGCTTACAAGTGAAGAACTGTTTCAGCTTCTGCTTCAAAATGACCCTTCTTTACTTCCAGAGGTGTGCTTTCACTACAACAAGGGGAACGGTGATTTTGGCAGTTGTAAATACAAGACGTCCTGTACCAACCTGCACCTCTGCCAGCACTTCCTGCAGGAAGACTGTAAGTTCGGAGCGACTTGCAAAAGAGCCCACAAATTCGATGCGAGTGCTCTGAAAATCCTTAGTGCCCGTGGGCTCAGTGCGGAAAACATGCGCAGACTCCTCAAGCTTTACAAGAACAGGTTATTGATTGCTTCTGCAGCTTTCAAGAAGAAAGAGACAGTGTCTGTACCTGCAGCAAAAGGACGCACCAGACACAAGTCCGGTAACTCTGTCAGTGAAGCGGACCACAATGAAATCTGCCTCTTTTTCATACGCACTGGATGCAGTTTTAAAGACAAGTGTGCCCGTATTCACCACAATCTACCTTACAAATGGCAGATCTTACAGAAAGATGGAACGACATGGAGTGACTTGCCAAATGAAGAGGAGATTGAGAAGGCGTATTGCAGTCCTGCTAATGTTTTGTGTATTACTGATAGCAGCACAGGGCACATGGTAGTGGACTTCATGTCAATGACATGTGGAGTATCAGATGTCCGTCGTCTGTCCACAGCATCTTCTGTTACTAAACCACCACACTTCATTCTCACCACTGAATGGATCTGGTTCTGGAGGAACGACAAGGGTGGCTGGACGGAGTACGGCAAAGGGGAGGATGCAAAACTCGTGGCGTCGGTCACTTCAGAAGACCTAGAGAAACTCTACCTGGCGGACAGTGAAAAGGAAATCTCATTCACATCCCAGAACCATCAGTATGTGCTCAAATTTAAAGAGATGTGCCAACAAAATCTGAAGTACAAAACTGAGAGAGATGTTCGAAGGAGACCTCGTTTTGTATCTGCTCAAGACGTCAAGAGTAAAATCAAGGGAGGTGATTCTACAGAAAGCTCAGCATCTTCTTCTGCAGATGTTCCTTCTTACTGGGACAAAGGAGCTCCTGATACCGGCACCTACAAGATTGTTTCACTGCAAAAAACTTGCAAGGAGTATGAGAGAGTGAGCTCAATGTTTAATAGAACTCTGCCTGGAAGCATCATTCACCGCATTGACAGAGTGCAGAATCCTTCACTCTGGAAAGTCTTTGAGTGGCAAAAAGAGCAAATGAACTTAAAGAGTGGAGGAAAGGTAGTGGACCAGCGCTACCTGTTTCATGGTACAGATGAATCTCACATGGATGCCATTTGTGATCAAAACTTTGACTGGAGGATTTGCGGAAGTAACGGGACACTTTATGGGAAAgGAAGCTATTTTGCCAGAGATGCTTCATACTCGGACAGATACGCCAGATCTAGGAACGGAAAGACCAAGAAGATGTTCATGGCGCTTGTGCTGGTTGGAGACTTCATTAGGGGTAACAATAGTTTAGTTCGTCCACCACAAAAACCACACAGCCAAAGATTTTACGACAGCTGTGTCGACAACGAGGCAAACCCGGCCATTTTTGTCGTGTTTGAGAAATTTCAGATCTATCCGGAGTACATCATTGAATACTCCTGATATGTGCCGTGTCAAATTATGTTTGGATATATTTGACGCACTCAAACATTCTAAGCAGATCTACTTGTTTCTCGAAATCCTTCTGAAACGGTTAATATCGCTGAACAACCAAAATCTTCAACTTTAGGGCATTTAAGCTTCTTCTTTAGTGAATACTAATGGGATGTTACATAGTAGATAGTTAGATgagtaaatttaattagtttcagTCTCTATTCAATCATCTATGTGTGATGGAAATGGCAAACTGGTAAAAAAACGAAATATCTgaattttattgtgatttattatgttattttccTTATTGACTTTTgtgctgagagaaaaaaa

Function

symbol description
parp12a Predicted to enable NAD+ ADP-ribosyltransferase activity and metal ion binding activity. Orthologous to human PARP12 (poly(ADP-ribose) polymerase family member 12).

GO:

id name namespace
GO:0046872 metal ion binding molecular_function
GO:0003950 NAD+ ADP-ribosyltransferase activity molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-050419-6 Predicted to enable NAD+ ADP-ribosyltransferase activity and metal ion binding activity. Orthologous to human PARP12 (poly(ADP-ribose) polymerase family member 12).

Ensembl:

ensembl_id ENSDARG00000042496

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00026285 True 2359 mRNA 0.43 12 12839126 12858016

Neighbor

gene id symbol gene type direction distance location
XLOC_013282 BX247877.1 coding downstream 73674 12760802 ~ 12765452 (-)
XLOC_013280 hipk2 coding downstream 185115 12464461 ~ 12654011 (-)
XLOC_013281 AL929229.2 coding downstream 306966 12532046 ~ 12532160 (-)
XLOC_013279 si:ch211-1e14.1 coding downstream 385576 12364733 ~ 12453550 (-)
XLOC_013278 NA coding downstream 475797 12358383 ~ 12363329 (-)
XLOC_013284 NA coding upstream 4588 12862604 ~ 12863523 (-)
XLOC_013285 srgap1a coding upstream 9384 12867400 ~ 13056801 (-)
XLOC_013286 CT573465.1 coding upstream 87601 12945617 ~ 12945731 (-)
XLOC_013287 rxylt1 coding upstream 205194 13063210 ~ 13121983 (-)
XLOC_013288 NA coding upstream 219827 13077843 ~ 13114318 (-)
XLOC_013384 BX323829.1 misc upstream 6684086 19542102 ~ 19542231 (-)
XLOC_013277 NA non-coding downstream 484852 12346296 ~ 12354274 (-)
XLOC_013273 NA non-coding downstream 1122804 11713285 ~ 11716322 (-)
XLOC_013291 BX511124.1 non-coding upstream 423638 13281654 ~ 13287651 (-)
XLOC_013293 BX890576.1 non-coding upstream 619086 13477102 ~ 13478222 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) CI01000013_08216673_08226743 PARP12A, PARP12 coding CI01000013 null 8216599 ~ 8227774 (+)