G468354


Basic Information

Item Value
gene id G468354
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000325
NCBI id null
chromosome length 10587162
location 10221991 ~ 10222221 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU537575
GTTTCTGTCATTAATTATTCACCCTCATGTCGCTCCATACCCGTAAGACCTTCGTACATCTTCGGAACACAAATTAACATTTTGATGAAATCCGAGAGGTATCTGACTCGTTCATAGACAGCAACGTAATTACGACTACAGTGGTTAAACCTTAATGTAATAAAGCGACAAGAATACTTTTTGTGCGCAAAAACAAAACAAAAATAACGACAACAATTCAACAATTTCTTC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU537575 True 231 lncRNA 0.36 1 10221991 10222221

Neighbor

gene id symbol gene type direction distance location
CI01000325_10183659_10190907 SNAP25, SNAP25.S, SNAP25A, SN25A coding upstream 30383 10183659 ~ 10191608 (+)
CI01000325_10143735_10150373 ANKEF1, ANKEF1A coding upstream 71418 10143735 ~ 10150573 (+)
CI01000325_10127601_10139309 EMILIN1A coding upstream 81106 10127251 ~ 10140885 (+)
CI01000325_10090866_10091109 NA coding upstream 130765 10090866 ~ 10091226 (+)
CI01000325_10077265_10086696 MCM3 coding upstream 134719 10077265 ~ 10087272 (+)
CI01000325_10250179_10252706 NA coding downstream 27146 10249367 ~ 10253153 (+)
CI01000325_10256815_10257312 NA coding downstream 34594 10256815 ~ 10257886 (+)
CI01000325_10266709_10324239 CDC42BPA coding downstream 43381 10265602 ~ 10324253 (+)
CI01000325_10348845_10351323 FBXO16 coding downstream 126624 10348845 ~ 10351428 (+)
CI01000325_10370275_10385142 NA coding downstream 147824 10370045 ~ 10386291 (+)
G468349 NA non-coding upstream 13299 10207072 ~ 10208692 (+)
G468348 NA non-coding upstream 24961 10195365 ~ 10197030 (+)
G468256 NA non-coding upstream 210644 10009872 ~ 10011347 (+)
G468276 NA non-coding upstream 301426 9920354 ~ 9920565 (+)
G468377 NA non-coding downstream 11164 10233385 ~ 10236165 (+)
G468400 NA non-coding downstream 180971 10403192 ~ 10403456 (+)
G468440 NA non-coding downstream 296003 10518224 ~ 10518552 (+)
G468453 NA non-coding downstream 350539 10572760 ~ 10573192 (+)
CI01000325_08732866_08734588 NA other upstream 1487439 8732514 ~ 8734758 (+)
G466752 NA other upstream 1646781 8574116 ~ 8575210 (+)
G466219 NA other upstream 2735584 7482036 ~ 7486407 (+)
G466227 NA other upstream 2907179 7312083 ~ 7314812 (+)
G466236 NA other upstream 3217336 7003617 ~ 7004655 (+)

Expression


Co-expression Network