Gene
RNA
| Item | Value |
|---|---|
| gene id | G481677 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000339 |
| NCBI id | null |
| chromosome length | 8057057 |
| location | 1669830 ~ 1670040 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU552717 | True | 211 | lncRNA | 0.34 | 1 | 1669830 | 1670040 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000339_01653753_01656488 | UPRT, UPP | coding | downstream | 12940 | 1653429 ~ 1656890 (-) |
| CI01000339_01525582_01552389 | NA | coding | downstream | 117441 | 1525044 ~ 1552389 (-) |
| CI01000339_01515719_01522951 | APOOL | coding | downstream | 146879 | 1515416 ~ 1522951 (-) |
| CI01000339_01394345_01398989 | NA | coding | downstream | 270841 | 1394242 ~ 1398989 (-) |
| CI01000339_01385481_01386022 | NA | coding | downstream | 283808 | 1384306 ~ 1386094 (-) |
| CI01000339_01697846_01701846 | NA | coding | upstream | 27806 | 1697846 ~ 1701986 (-) |
| CI01000339_01738384_01741637 | PLP1B | coding | upstream | 68070 | 1738110 ~ 1741677 (-) |
| CI01000339_01746556_01761682 | NLGN3B | coding | upstream | 76297 | 1746337 ~ 1761682 (-) |
| CI01000339_01764768_01765697 | NA | coding | upstream | 94051 | 1764091 ~ 1766227 (-) |
| CI01000339_01769896_01810664 | GRIA3, GRIA3A | coding | upstream | 99776 | 1769816 ~ 1811582 (-) |
| G481646 | NA | non-coding | downstream | 65500 | 1603464 ~ 1604330 (-) |
| G481609 | NA | non-coding | downstream | 92114 | 1574523 ~ 1577716 (-) |
| G481622 | NA | non-coding | downstream | 148895 | 1519962 ~ 1520935 (-) |
| G481602 | NA | non-coding | downstream | 173900 | 1495503 ~ 1495930 (-) |
| G481597 | NA | non-coding | downstream | 255518 | 1413959 ~ 1414312 (-) |
| G481664 | NA | non-coding | upstream | 620 | 1670660 ~ 1676737 (-) |
| G481686 | NA | non-coding | upstream | 42032 | 1712072 ~ 1712600 (-) |
| G481688 | NA | non-coding | upstream | 79872 | 1749912 ~ 1750170 (-) |
| G481689 | NA | non-coding | upstream | 84136 | 1754176 ~ 1754410 (-) |
| G481690 | NA | non-coding | upstream | 85114 | 1755154 ~ 1755603 (-) |
| G481610 | NA | other | downstream | 95868 | 1571537 ~ 1573962 (-) |
| G481157 | NA | other | downstream | 553682 | 1114129 ~ 1116148 (-) |
| CI01000339_00932339_00951205 | SMARCA1 | other | downstream | 716396 | 931680 ~ 951205 (-) |
| G480969 | NA | other | downstream | 1579633 | 85093 ~ 90197 (-) |
| G481662 | NA | other | upstream | 53730 | 1723770 ~ 1733019 (-) |
| CI01000339_01988812_02024891 | NA | other | upstream | 319135 | 1988537 ~ 2025183 (-) |
| G483104 | NA | other | upstream | 1724068 | 3394108 ~ 3401228 (-) |
| G483199 | NA | other | upstream | 2107851 | 3777891 ~ 3778551 (-) |
| G483285 | NA | other | upstream | 2455218 | 4125258 ~ 4170502 (-) |
