CI01000343_00707941_00712532


Basic Information

Item Value
gene id CI01000343_00707941_00712532
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000343
NCBI id null
chromosome length 1937981
location 707941 ~ 712626 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000343_00707941_00712532.mRNA
GATGTCATCATCACTTCCTGTGGCAGCAGTTTGTCAGATCACTGCCACCCCTGACAAAGAGGCCAACTTCAGCGTATGTATGCGATTGGTGGAGCAGGCCAAAGAGGGCGGGGCGAGCATGGTCTTCCTGCCGGAGGGCTTCGATTATATTGGCTCGAACCGTGAGGAGACGCTGGCGCTCTCAGAGACTCTGGACGGTGACATCATAAGCCGCTACACCCACCTGGCCAGGAAGCTGGACGTGTGGCTGTCTCTGGGTGGATTTCATGAGAGAGGACATGACTGGAAAACAGACCGCCGCATTTATAACAGCCACATTATCATTAACGGTCAAGGTGAGATCGTGTCTGTCTACAGGAAGGGCCATTTGTTTGATGTGGAGTTGACCAGTAAAGGTGTGTCTCTTAAAGAGAGCGCTTTCACTGTGCCCGGACCTCGACTGCTTCCGCCCGTCCAGACGCCCATCGGAAAGGTGCTTCTGCGGGCGAGAGCGATCGAGACGCAGTGTTTCGTTATGGCGGCGGCACAGGTCGGAGCTCATCACGCCAAGCGGACGTCCTACGGACACGCTCTGGCAGTGGACCCGTGGGGTGTGGTGATCGGGGACTGCGGGGGTACGGATGTGGGCGTAACGCTGGTTCAGATCGACCTGCAGGCACTACAGGACGTCAGAAGGGACATGCCAGTGCAGCAGCACCGGAGAGAGAAGGACTTTTACTGCAGCTTGGACTAAAACACATTTATACAATGAACATGCCTTTTATGTTATAAATAATACACATTGACGCATAGTGACGACTTATTGTGTATTAATTCATGACTTCTTA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000343_00707941_00712532.mRNA True 827 mRNA 0.53 4 707941 712626

Neighbor

gene id symbol gene type direction distance location
CI01000343_00617627_00630920 NA coding upstream 76678 617627 ~ 631263 (+)
CI01000343_00575455_00577282 GAL3ST3 coding upstream 130447 574691 ~ 577494 (+)
CI01000343_00521663_00538782 ACTN3, ACTN3A, ACTN3B, ACTN3.L coding upstream 167956 521663 ~ 539985 (+)
CI01000343_00499439_00502081 RBM14B coding upstream 204287 498615 ~ 503654 (+)
CI01000343_00487812_00497022 CCS coding upstream 210469 487812 ~ 497472 (+)
CI01000343_00726846_00729654 CLCN3 coding downstream 14220 726846 ~ 729891 (+)
CI01000343_00738858_00768868 CLCN3 coding downstream 25475 738101 ~ 768927 (+)
CI01000343_00801086_00807630 INO80B coding downstream 88460 801086 ~ 808345 (+)
CI01000343_01056416_01066755 NA coding downstream 343790 1056416 ~ 1066884 (+)
CI01000343_01247693_01260224 NA coding downstream 535067 1247693 ~ 1260265 (+)
G497799 NA non-coding upstream 378 707112 ~ 707563 (+)
G497776 NA non-coding upstream 1868 686362 ~ 706073 (+)
G497797 NA non-coding upstream 24167 683556 ~ 683774 (+)
G497773 NA non-coding upstream 56051 651065 ~ 651890 (+)
G497769 NA non-coding upstream 116573 591159 ~ 591368 (+)
G497801 NA non-coding downstream 974 713600 ~ 713814 (+)
G497802 NA non-coding downstream 1208 713834 ~ 714310 (+)
G497793 NA non-coding downstream 57651 770277 ~ 771061 (+)
G497784 NA non-coding downstream 62980 775606 ~ 777207 (+)
G497808 NA non-coding downstream 91571 804197 ~ 805292 (+)
CI01000343_00276188_00284420 NA other upstream 426535 276122 ~ 284434 (+)
G497821 NA other downstream 312851 1025477 ~ 1026398 (+)
CI01000343_01368460_01381795 SNRPA1 other downstream 659174 1367831 ~ 1381822 (+)
G498036 NA other downstream 923662 1636288 ~ 1646589 (+)
CI01000343_01668952_01681097 NA other downstream 951326 1668952 ~ 1681277 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_033448 nit1 coding NC_007118.7 CM002891.2 7495034 ~ 7508747 (+)