CI01000352_00472719_00476864


Basic Information

Item Value
gene id CI01000352_00472719_00476864
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000352
NCBI id null
chromosome length 2255705
location 472600 ~ 478075 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000352_00472719_00476864.mRNA
AGAGCCAATTATTTTCCATTGTGAATGGAGAAACCTGGGTTCTTTATGCAAGAGCAGTGTTTACCAACCCTAAGCACTATAAATCATCAAGTCTGATGTGTGTGTCTGTAGTAAAATCAACAACGCATTGAGAATTGCCATTACTGAAATACAGTTCCTCTAATGGCGAATGTAGGTGTTGAAAGAAAATAGAAACCAGACAACAAAATAAATGCTATCTTACATTGATTGCTCGAGGAGACGTTTTATATGTCTTAAATAGTTTAATAAAAAAAAATACAGGTTAATAAACATCAAACATATATTGAAATGTAAGATTTTAACTGGAATTATATCTCTAGTAAGTCATGGAGACCCATGGCATAAGAATGGTTTATTTCCTAAGAATGAGCCAAACATCTGATTGTCCCTCTAATGAGCTGTGACAGGACTATAATGTTTTATTACAGAGTGACCTTGACTTGGACAAACTTCAGAAAGTATTAGGCAATTGAATATGCAATTGCAATTTCTGGGTTTCCAGTAAATATTATACGTAAAACGAGCATCCCCTCCTCTTTTAGCCTTACAAGGATATTTAACTGAGTGTTAGGGGATGATAAGTAAAGAATACTGACTGGTTTCCAATCAACTCGCATTACATATTATTTACAGAGACAACTGGTAAGATTAACCTTTTCACATAAGGCTCTTTTTTAGTTTAAATGTTTTAAAATGTTTAACAGTTTCTGCATTATGTTTTTATTCATTTGCACTTAGTATTTTTTTGTTTTTCTTAAAAAGTTTTAGTTTTCTCACATTTACTTCGTTGATGCTTTCAAAATGAATTAAGTGGACTATAATTTGTTCCTTTAACAGTCCTTAAACATCAACTGAAGCATCCTTTTATTATTTCAATTCAGCTTCAAATGTTAAAAAATGCTTTTACATATAGAGTTTGGATAAAAATATTGGTTAACATTTTTTGTGTGTATATTTTTTTCAGCCTCTTCAACAAAAAGTCAAAATGAGTAAGTTGTTGTTCTTACCAGAATGATACAGCAGTTTCAGTGAACAACATTTTGAAATATCCTGTTGCAATTCTCTGCATTTCTAATGAAATAGGCTAGATAAACAATGAACATGCTTGTTTTTGTGTGTTTCTAGCCATTGCTTTTTTTTTTTTTTTTTTTTTTACTTCAGAGTCAGACCAAACTGTAGCCCCATCCAATATGACGGCATCAACAAGCAATGCAGATGTCACAGCAAATTCCTTAAGGAAAATCAATATTTTCCTCCACTGTATAATATGTGTGTTTGGTATTGTTGGCAATGGACTGGTCATCTACATCACAGGCCTCAAAATGAAAAGCACTGTCAATGCCATTTGGTTTCTGAACCTGGCGGTAGCAGACTTCCTATTTTCATTCTTTCTGATATTCAATATAATTTATAAATACCGTGAGTTCGACTGGCCTTTTGGTGACTTTATGTGCTTCTTGAGCAGCCTGGTGACCGTGTTGAATATGTTTGCCAGCACCTTCCTGCTGACAGCGATCAGTTTGGACCACTGCCTGTCCACCTGGGTGGTGGTGTGGGCCAGGACCAAACGAACAGTCATGAAAGCAAGGATAATTTGCCTGCTTATTTGGTTAGCGTCAGTCGCTTGCAGCCTGCCTTTAGTCATCTCTCGGAAAACGCTTTCCATTTCTGCACAACAAACAAAGTGCATAAAAGACATTCAGAAACTAGAAACATACAAGAGGCAGGTAGTGTACCGTTTTGTGGTGGGTTTTCTCCTCCCGTTTGTCATAATCTCCGCTTCGTATGTGGCGATCGGAGTACAAGTTAAGCACCTCCGGAAAAATTATAAACTAAAACCCTTCCGTATTATCCTGGCTGTAATCATGTCCTTCTTCTTCTGCTGGCTTTCCTTTTATGTTCACAAATTCATTGAAGCGTGGTTGCATGAAATGAATACGACAAACCCAGAGAGGGGATTTTCAGAAAAAGCTCAAGCAATCTTTAGTGATGGTGTTCGAGAGTGCATTCGCAGAGGAACACCTGGCTTTCCTCCTCACAACATTCCCAATCCAAACGCAAATCTCATTCGCAGAGTGGAACAGGAATAGAAATGAAATGACCCAATCTTTGACACTTGAGGCTTAAATGAAACATTCAAATAATATTTACATTTATTAATCAATAAACTATTTTTTAACATAATAAATTAAAGGCAACATTTATTAAA

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000352_00472719_00476864.mRNA True 2230 mRNA 0.36 2 472600 478075

Neighbor

gene id symbol gene type direction distance location
CI01000352_00447631_00450928 NA coding downstream 21526 447592 ~ 451074 (-)
CI01000352_00402976_00419805 NA coding downstream 52007 402518 ~ 420593 (-)
CI01000352_00385785_00387033 NA coding downstream 85567 385746 ~ 387033 (-)
CI01000352_00374035_00374510 NA coding downstream 97423 373597 ~ 375177 (-)
CI01000352_00287910_00289361 NA coding downstream 182789 287189 ~ 289811 (-)
CI01000352_00478813_00480433 NA coding upstream 45 478120 ~ 482684 (-)
CI01000352_00549005_00551748 CTRL coding upstream 70904 548979 ~ 551774 (-)
CI01000352_00553364_00555334 NA coding upstream 75129 553204 ~ 555364 (-)
CI01000352_00558495_00562831 HSC70, HSPA8, HSPA1A, HSPA1A.L, HSP70, HSP70-3 coding upstream 80420 558495 ~ 562953 (-)
CI01000352_00564738_00564956 NA coding upstream 86556 564631 ~ 564956 (-)
G510639 NA non-coding downstream 173042 298867 ~ 299558 (-)
CI01000352_00186554_00189415 NA non-coding downstream 283013 186474 ~ 191221 (-)
G510578 NA non-coding downstream 287111 185255 ~ 185489 (-)
CI01000352_00155260_00164016 NA non-coding downstream 313060 154439 ~ 164747 (-)
G510167 NA non-coding downstream 453264 18780 ~ 19336 (-)
G510643 NA non-coding upstream 120950 599025 ~ 602879 (-)
G510775 NA non-coding upstream 168415 646490 ~ 688850 (-)
G510774 NA non-coding upstream 255831 733906 ~ 737707 (-)
G510841 NA non-coding upstream 314618 792693 ~ 792971 (-)
G510844 NA non-coding upstream 316915 794990 ~ 795237 (-)
CI01000352_00081761_00086027 NA other downstream 381942 80953 ~ 86080 (-)
G510953 NA other upstream 491358 972660 ~ 997817 (-)
G511618 NA other upstream 1597458 2075533 ~ 2085310 (-)

Expression


Co-expression Network